HHsearch alignment for GI: 254780476 and conserved domain: COG0745
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
Probab=99.96 E-value=5.6e-28 Score=181.48 Aligned_cols=119 Identities=26% Similarity=0.517 Sum_probs=114.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 77899539989999999999978989999889799999998279989999504129695999999982857689959999
Q gi|254780476|r 3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAV 82 (123)
Q Consensus 3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~ 82 (123)
T Consensus 1 ~~ILiveDd~~i~~~l~~~L~~~G~~v~~~~~~~~a~~~~~~~-~dlviLD~~lP~~dG~~~~~~iR~~-~~~~~PIi~L 78 (229)
T COG0745 1 MRILLVEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQ-PDLVLLDLMLPDLDGLELCRRLRAK-KGSGPPIIVL 78 (229)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCEEEEECCCCCCCHHHHHHHHHHC-CCCCCCEEEE
T ss_conf 9899991888999999999987597899978989999997269-9999998899985689999999851-6899988999
Q ss_pred EECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 92499899999997699889987989899999999974039
Q gi|254780476|r 83 TAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIGEA 123 (123)
Q Consensus 83 t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~~a 123 (123)
T Consensus 79 ta~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR~ 119 (229)
T COG0745 79 TARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRN 119 (229)
T ss_pred ECCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCC
T ss_conf 66872888999997563423348899899999999996736