HHsearch alignment for GI: 254780476 and conserved domain: COG0784
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms].
Probab=99.84 E-value=2e-19 Score=132.32 Aligned_cols=119 Identities=33% Similarity=0.657 Sum_probs=107.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHH-HHHHHHHHC-CCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 987789953998999999999997898999988979-999999827-998999950412969599999998285768995
Q gi|254780476|r 1 MLKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGM-EALELARQH-KPDVIIMDIQLQEISGLEITKQIKEDSELQEIP 78 (123)
Q Consensus 1 m~kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~-eal~~l~~~-~~dlillD~~mp~~dG~el~~~ir~~~~~~~ip 78 (123)
T Consensus 4 ~~~~vLivdD~~~~~~~~~~~l~~~g~~v~~a~~~~~~al~~~~~~~~~dlii~D~~mp~~~G~~~~~~l~~~--~~~~p 81 (130)
T COG0784 4 SGLRVLVVDDEPVNRRLLKRLLEDLGYEVVEAADGEEEALELLRELPQPDLILLDINMPGMDGIELLRRLRAR--GPNIP 81 (130)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCC
T ss_conf 8888999789999999999999877978999578399999998627899999980688788889999999971--89996
Q ss_pred EEEEEECCCHHHHHHHHHCCCCEEEECCCCHHH-HHHHHHHHHH
Q ss_conf 999992499899999997699889987989899-9999999740
Q gi|254780476|r 79 VIAVTAFAMKGDEERIRKGGCEAYISKPISLSI-FMETIKKYIG 121 (123)
Q Consensus 79 ii~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~-L~~~i~~~l~ 121 (123)
T Consensus 82 vv~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~ 125 (130)
T COG0784 82 VILLTAYADEADRERALAAGADDYLTKPIFLEEELLAALRRLLA 125 (130)
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf 89998678676599999768768975899879999999999986