HHsearch alignment for GI: 254780476 and conserved domain: COG4567

>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription].

Probab=99.69  E-value=6e-16  Score=112.35  Aligned_cols=115  Identities=21%  Similarity=0.403  Sum_probs=108.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf             77899539989999999999978989999889799999998279989999504129695999999982857689959999
Q gi|254780476|r    3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAV   82 (123)
Q Consensus         3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~   82 (123)
T Consensus        10 ~~lllvdDD~~f~~~LaRa~e~RGf~v~~a~~~~eal~~art~~PayAvvDlkL~~gsGL~~i~~lr~~~--~d~rivvL   87 (182)
T COG4567          10 KSLLLVDDDTPFLRTLARAMERRGFAVVTAESVEEALAAARTAPPAYAVVDLKLGDGSGLAVIEALRERR--ADMRIVVL   87 (182)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCC--CCCEEEEE
T ss_conf             6058961876999999999860686257614499999998517985288986406887468999998249--76438988


Q ss_pred             EECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf             9249989999999769988998798989999999997
Q gi|254780476|r   83 TAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKY  119 (123)
Q Consensus        83 t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~  119 (123)
T Consensus        88 TGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~~  124 (182)
T COG4567          88 TGYASIATAVEAVKLGACDYLAKPADADDILAALLRR  124 (182)
T ss_pred             ECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
T ss_conf             4511799999999862455407977768999998602