HHsearch alignment for GI: 254780476 and conserved domain: COG4999
>COG4999 Uncharacterized domain of BarA-like signal transduction histidine kinases [Signal transduction mechanisms].
Probab=96.25 E-value=0.017 Score=35.06 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=77.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH--HHHHCCCCCCCCE
Q ss_conf 87789953998999999999997898999988979999999827998999950412969599999--9982857689959
Q gi|254780476|r 2 LKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITK--QIKEDSELQEIPV 79 (123)
Q Consensus 2 ~kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~--~ir~~~~~~~ipi 79 (123)
T Consensus 11 gk~LayiEpNstAA~~t~~iL~~tpleVtyr~t----~~~lp~~hYD~~Ll~vavtfr~n~tm~~~~l~~Al~mt-d~vi 85 (140)
T COG4999 11 GKRLAYIEPNSTAAQCTLDILSETPLEVTYRPT----FSALPPAHYDMMLLGVAVTFRENLTMQHERLAKALSMT-DFVI 85 (140)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEECCC----CCCCCHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHH-CCEE
T ss_conf 664577668608999999998468826884233----10027445203465366655688038899999998653-1367
Q ss_pred EEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf 99992499899999997699889987989899999999
Q gi|254780476|r 80 IAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIK 117 (123)
Q Consensus 80 i~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~ 117 (123)
T Consensus 86 lalP-s~~qv~AeqLkQ~g~~~CllKPls~~rLlptll 122 (140)
T COG4999 86 LALP-SHAQVNAEQLKQDGAGACLLKPLSSTRLLPTLL 122 (140)
T ss_pred EECC-CHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH
T ss_conf 7367-288875999963142867407650656678998