HHsearch alignment for GI: 254780476 and conserved domain: PRK09958
>PRK09958 DNA-binding transcriptional activator EvgA; Provisional.
Probab=99.89 E-value=8.1e-22 Score=146.09 Aligned_cols=116 Identities=18% Similarity=0.348 Sum_probs=108.8
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 789953998999999999997898999-9889799999998279989999504129695999999982857689959999
Q gi|254780476|r 4 KVMIVEDNELNMKLFRDLIETSGYIAL-QTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAV 82 (123)
Q Consensus 4 kiLiVDD~~~~~~~l~~~l~~~g~~v~-~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~ 82 (123)
T Consensus 2 ~vlivDDh~lvr~gl~~ll~~~~~~vv~~~~~~~~~l~~~~~~~pDvvllDl~lp~~~G~~~~~~ir~~--~~~~~viv~ 79 (204)
T PRK09958 2 NAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKR--QYSGIIIIV 79 (204)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH--CCCEEEEEE
T ss_conf 899986989999999999986899899997999999999874397999995899999841678889872--798059999
Q ss_pred EECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 924998999999976998899879898999999999740
Q gi|254780476|r 83 TAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIG 121 (123)
Q Consensus 83 t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~ 121 (123)
T Consensus 80 s~~~~~~~~~~a~~~Ga~g~l~K~~~~~~l~~aI~~v~~ 118 (204)
T PRK09958 80 SAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKN 118 (204)
T ss_pred ECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf 724652114433526863799789999999999999977