HHsearch alignment for GI: 254780476 and conserved domain: PRK10651

>PRK10651 transcriptional regulator NarL; Provisional.
Probab=99.88  E-value=7.8e-22  Score=146.19  Aligned_cols=117  Identities=18%  Similarity=0.376  Sum_probs=108.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
Q ss_conf             877899539989999999999978-98999-9889799999998279989999504129695999999982857689959
Q gi|254780476|r    2 LKKVMIVEDNELNMKLFRDLIETS-GYIAL-QTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPV   79 (123)
Q Consensus         2 ~kkiLiVDD~~~~~~~l~~~l~~~-g~~v~-~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipi   79 (123)
T Consensus         6 pirVlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~ea~~~~~~~~pDlvllDl~lp~~~G~~~~~~l~~~--~~~~~i   83 (216)
T PRK10651          6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREK--SLSGRI   83 (216)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC--CCCCCE
T ss_conf             978999839999999999999758993899998999999999870799999995999998887642323345--788746


Q ss_pred             EEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf             99992499899999997699889987989899999999974
Q gi|254780476|r   80 IAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI  120 (123)
Q Consensus        80 i~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l  120 (123)
T Consensus        84 ivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~L~~ai~~v~  124 (216)
T PRK10651         84 VVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA  124 (216)
T ss_pred             EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             76305541889999996698789837899999999999998