HHsearch alignment for GI: 254780476 and conserved domain: PRK10701
>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=99.97 E-value=1.3e-29 Score=190.83 Aligned_cols=118 Identities=17% Similarity=0.291 Sum_probs=112.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 87789953998999999999997898999988979999999827998999950412969599999998285768995999
Q gi|254780476|r 2 LKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIA 81 (123)
Q Consensus 2 ~kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~ 81 (123)
T Consensus 1 M~kILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~~~~DlvilDi~LP~~dG~~l~~~iR~~---~~~PiI~ 77 (240)
T PRK10701 1 MNTIVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILREQPDLVLLDIMLPGKDGMTICRDLRPK---WSGPIVL 77 (240)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCC---CCCCEEE
T ss_conf 9989999799999999999998879999998999999999861799999992899767887876311025---8987899
Q ss_pred EEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 99249989999999769988998798989999999997403
Q gi|254780476|r 82 VTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIGE 122 (123)
Q Consensus 82 ~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~~ 122 (123)
T Consensus 78 lta~~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr 118 (240)
T PRK10701 78 LTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQ 118 (240)
T ss_pred EEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 94057578899999768877641799879999999999965