HHsearch alignment for GI: 254780476 and conserved domain: PRK11107

>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.28  E-value=1.1e-10  Score=82.08  Aligned_cols=112  Identities=15%  Similarity=0.178  Sum_probs=95.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             87789953998999999999997898999988979999999827998999950412969599999998285768995999
Q gi|254780476|r    2 LKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIA   81 (123)
Q Consensus         2 ~kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~   81 (123)
T Consensus       536 g~~vlvve~~~~~~~~l~~~L~~~g~~v~~~~~~~~l----~~~~~D~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~il  611 (920)
T PRK11107        536 GKRLLYVEPNSLAAQATLDLLSETPLEVTYSPTLSQL----PEAHYDYLLLGCPVTFREPLTMLHERLAKAKSMTDFLIL  611 (920)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHH----HCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf             8769997697789999999999749645751788775----136888799616666654066789998630035784699


Q ss_pred             EEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf             992499899999997699889987989899999999
Q gi|254780476|r   82 VTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIK  117 (123)
Q Consensus        82 ~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~  117 (123)
T Consensus       612 ~~~s~~~~~~~~~~~~~~~~~L~kPv~~~~L~~~L~  647 (920)
T PRK11107        612 ALPCHEQVNAEQLKQPGADACLSKPLSETRLLPALL  647 (920)
T ss_pred             EECCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHH
T ss_conf             715643455788764253021127776889999872