HHsearch alignment for GI: 254780476 and conserved domain: PRK13837
>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=99.84 E-value=2e-19 Score=132.38 Aligned_cols=116 Identities=14% Similarity=0.238 Sum_probs=105.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
Q ss_conf 7789953998999999999997898999988979999999827--99899995041296959999999828576899599
Q gi|254780476|r 3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQH--KPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVI 80 (123)
Q Consensus 3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~--~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii 80 (123)
T Consensus 700 e~ILvVdDe~~vr~~~~~~L~~lGY~v~~a~~~~~Al~~~~~~~~~~DLvltD-~~p~~~g~~~~~~l~~~~--p~lpVi 776 (831)
T PRK13837 700 ETVLLVEPDDALLERYEEKLAALGYEPVGFSTLSAAIAWISKDGKRFDLVLVD-QPSLGDSQLAIAALHAAA--PTLPII 776 (831)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEC-CCCCCCHHHHHHHHHHHC--CCCEEE
T ss_conf 77999859889999999999967996888689999999998389985399988-999998799999998618--997499
Q ss_pred EEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 999249989999999769988998798989999999997403
Q gi|254780476|r 81 AVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIGE 122 (123)
Q Consensus 81 ~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~~ 122 (123)
T Consensus 777 l-sg~~~~~~~~~~~~~~~~~fL~KPfs~~~LA~avR~aL~~ 817 (831)
T PRK13837 777 L-AGSSLKMAAREALATAIAEILPKPISSRTLAYALRTALAT 817 (831)
T ss_pred E-ECCCCHHHHHCHHHCCCCEEEECCCCHHHHHHHHHHHHHC
T ss_conf 9-7688144331102226670650999999999999999848