HHsearch alignment for GI: 254780476 and conserved domain: TIGR01387
>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region. This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members are encoded by genes adjacent to genes which code for a member of the heavy metal sensor histidine kinase family (IPR006290 from INTERPRO), its partner in the two-component response regulator system. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=99.97 E-value=1.8e-31 Score=201.48 Aligned_cols=117 Identities=24% Similarity=0.483 Sum_probs=113.5
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 89953998999999999997898999988979999999827998999950412969599999998285768995999992
Q gi|254780476|r 5 VMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAVTA 84 (123)
Q Consensus 5 iLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~t~ 84 (123)
T Consensus 1 iLvvEDeqkT~~YlqqGLsE~GYvvD~~~nG~DGL~lA~~~~Y~liILDvmLPG~DGW~vl~~LR~~~--~~~PVl~LTA 78 (219)
T TIGR01387 1 ILVVEDEQKTAEYLQQGLSESGYVVDIASNGRDGLHLAEKDDYDLIILDVMLPGMDGWQVLKALRRSG--KETPVLFLTA 78 (219)
T ss_pred CEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC--CCCCEEEEEC
T ss_conf 96763086026765305201234798877686247543688830899632588950689999984078--9873488833
Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 499899999997699889987989899999999974039
Q gi|254780476|r 85 FAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIGEA 123 (123)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~~a 123 (123)
T Consensus 79 ~D~v~DkvkGLd~GAdDYLvKPF~F~ELlARvR~~LR~~ 117 (219)
T TIGR01387 79 RDSVADKVKGLDLGADDYLVKPFEFAELLARVRTLLRRS 117 (219)
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 788454353011478654137877603799999876775