HHsearch alignment for GI: 254780476 and conserved domain: cd00156

>cd00156 REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers.
Probab=99.96  E-value=2.7e-28  Score=183.32  Aligned_cols=113  Identities=34%  Similarity=0.626  Sum_probs=109.1

Q ss_pred             EEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf             99539989999999999978989999889799999998279989999504129695999999982857689959999924
Q gi|254780476|r    6 MIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAVTAF   85 (123)
Q Consensus         6 LiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~t~~   85 (123)
T Consensus         1 LvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~~al~~~~~~~~dlvi~D~~mP~~~G~el~~~ir~~--~~~~pvI~lT~~   78 (113)
T cd00156           1 LIVDDDPLIRELLRRLLEKEGYEVVEAEDGEEALALLAEEKPDLILLDIMMPGMDGLELLRRIRKR--GPDIPIIFLTAH   78 (113)
T ss_pred             CEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH--CCCCCEEEEECC
T ss_conf             989272999999999999889999998999999999875799999977999898726999999985--899959999787


Q ss_pred             CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf             99899999997699889987989899999999974
Q gi|254780476|r   86 AMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI  120 (123)
Q Consensus        86 ~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l  120 (123)
T Consensus        79 ~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~l  113 (113)
T cd00156          79 GDDEDAVEALKAGADDYLTKPFSPEELLARIRALL  113 (113)
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
T ss_conf             89999999997689789969899999999999869