HHsearch alignment for GI: 254780476 and conserved domain: cd01948
>cd01948 EAL EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.
Probab=91.51 E-value=0.82 Score=25.41 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=69.5
Q ss_pred HHHHHHHHHHCCCEEE--EECCHHHHHHHHHHCCCCEEEEEEEC-CC----CCHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 9999999997898999--98897999999982799899995041-29----69599999998285768995999992499
Q gi|254780476|r 15 MKLFRDLIETSGYIAL--QTRNGMEALELARQHKPDVIIMDIQL-QE----ISGLEITKQIKEDSELQEIPVIAVTAFAM 87 (123)
Q Consensus 15 ~~~l~~~l~~~g~~v~--~a~~g~eal~~l~~~~~dlillD~~m-p~----~dG~el~~~ir~~~~~~~ipii~~t~~~~ 87 (123)
T Consensus 134 ~~~~i~~l~~~G~~iaiDdfG~~~~~~~~l~~l~~d~iKld~~~v~~~~~~~~~~~~l~~l~~~a~~~~i~vi-aegVE~ 212 (240)
T cd01948 134 ALATLRRLRALGVRIALDDFGTGYSSLSYLKRLPVDYLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGLKVV-AEGVET 212 (240)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE-EEECCH
T ss_conf 9999999986499688616899876689998678015440899997364682238999999999998499899-981850
Q ss_pred HHHHHHHHHCCCCE----EEECCCCH
Q ss_conf 89999999769988----99879898
Q gi|254780476|r 88 KGDEERIRKGGCEA----YISKPISL 109 (123)
Q Consensus 88 ~~~~~~~~~~g~~~----~l~KPi~~ 109 (123)
T Consensus 213 ~~~~~~l~~lgi~~~QG~~~~~P~~~ 238 (240)
T cd01948 213 EEQLELLRELGCDYVQGYLFSRPLPA 238 (240)
T ss_pred HHHHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 99999999859999676912658999