HHsearch alignment for GI: 254780476 and conserved domain: cd02068

>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=90.87  E-value=1.4  Score=24.09  Aligned_cols=103  Identities=17%  Similarity=0.248  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHCCCEEEEECC--HHHHH-HHHHHCCCCEEEEEEECCCCC-HHHHHHHHHHCCCCCCCCEEEEEECCCH
Q ss_conf             9999999999978989999889--79999-999827998999950412969-5999999982857689959999924998
Q gi|254780476|r   13 LNMKLFRDLIETSGYIALQTRN--GMEAL-ELARQHKPDVIIMDIQLQEIS-GLEITKQIKEDSELQEIPVIAVTAFAMK   88 (123)
Q Consensus        13 ~~~~~l~~~l~~~g~~v~~a~~--g~eal-~~l~~~~~dlillD~~mp~~d-G~el~~~ir~~~~~~~ipii~~t~~~~~   88 (123)
T Consensus         3 LGl~ylaa~L~~~G~~v~~~d~~~~~~~~e~~~~~~~pdvvg~s~~~~~~~~~~~~~~~~k~~~--p~~~iv~-GG~h~t   79 (127)
T cd02068           3 LGLAYLAAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISLMTSAIYEALELAKIAKEVL--PNVIVVV-GGPHAT   79 (127)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHC--CCCEEEE-CCCCCC
T ss_conf             7999999999978995799857876203999986499699999976889999999999999978--9978998-598745


Q ss_pred             HHHHHHHHCCCCEEEECCCCHHHHHHHHHH
Q ss_conf             999999976998899879898999999999
Q gi|254780476|r   89 GDEERIRKGGCEAYISKPISLSIFMETIKK  118 (123)
Q Consensus        89 ~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~  118 (123)
T Consensus        80 ~~p~~~l~~~~~D~vv~GEGE~t~~~ll~~  109 (127)
T cd02068          80 FFPEEILEEPGVDFVVIGEGEETFLKLLEE  109 (127)
T ss_pred             CCHHHHHHCCCCCEEEECCHHHHHHHHHHH
T ss_conf             499999707587789968689999999999