HHsearch alignment for GI: 254780476 and conserved domain: pfam00563
>pfam00563 EAL EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.
Probab=94.41 E-value=0.33 Score=27.71 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHHCCCCEEEEEEECC----CCCHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 98999999999997898999--988979999999827998999950412----969599999998285768995999992
Q gi|254780476|r 11 NELNMKLFRDLIETSGYIAL--QTRNGMEALELARQHKPDVIIMDIQLQ----EISGLEITKQIKEDSELQEIPVIAVTA 84 (123)
Q Consensus 11 ~~~~~~~l~~~l~~~g~~v~--~a~~g~eal~~l~~~~~dlillD~~mp----~~dG~el~~~ir~~~~~~~ipii~~t~ 84 (123)
T Consensus 130 ~~~~~~~i~-~lk~~G~~iaiDdfG~~~~~~~~l~~l~~d~iKid~~~~~~~~~~~~~~~~~~l~~~a~~~~~~vi-aeG 207 (233)
T pfam00563 130 DLRLLEALA-RLRSLGFRLALDDFGTGYSSLSYLSRLPPDYIKIDRSFIKDLSDPESRALLRALIALARELGIKVV-AEG 207 (233)
T ss_pred CHHHHHHHH-HHHHCCCCEEECCCCCCCCCHHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEE-EEE
T ss_conf 199999999-999779958961789997677899748887899989998407772189999999999998799899-970
Q ss_pred CCCHHHHHHHHHCCCCE----EEECC
Q ss_conf 49989999999769988----99879
Q gi|254780476|r 85 FAMKGDEERIRKGGCEA----YISKP 106 (123)
Q Consensus 85 ~~~~~~~~~~~~~g~~~----~l~KP 106 (123)
T Consensus 208 VE~~~~~~~l~~~Gv~~~QG~~~~~P 233 (233)
T pfam00563 208 VETEEQLELLKELGIDYVQGYLFSKP 233 (233)
T ss_pred CCCHHHHHHHHHCCCCEEECCCCCCC
T ss_conf 86399999999759998316810279