RPSBLAST alignment of GI: 254780476 and protein with PDBid: 1kgs

>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix-turn-helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 Length = 225
 Score = 59.1 bits (142), Expect = 3e-10
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)

Query: 1   MLKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEIS 60
           M  +V++VED      L  + ++   +      +G E + +A     DV+I+DI L    
Sbjct: 1   MNVRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHD 60

Query: 61  GLEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120
           G EI K ++E       PV+ +TA +      +    G + Y+ KP  L   +  ++  I
Sbjct: 61  GWEILKSMRESG--VNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALI 118