RPSBLAST alignment of GI: 254780476 and protein with PDBid: 1s8n

>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} SCOP: c.23.1.1 PDB: 1sd5_A Length = 205

 Score = 86.1 bits (212), Expect = 2e-18
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 4/119 (3%)

Query: 3   KKVMIVEDNELNMKLFRDLIETSGYIALQT-RNGMEALELARQHKPDVIIMDIQLQEISG 61
           ++V+I ED  L      +++   GY  +    +G EA+ELA  HKPD++IMD+++    G
Sbjct: 14  RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDG 73

Query: 62  LEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120
           ++   +I         P++ +TAF+ +   ER R  G  AY+ KP S+S  +  I+  +
Sbjct: 74  IDAASEIASKR---IAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAV 129