RPSBLAST alignment of GI: 254780476 and protein with PDBid: 3cu5

>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141
 Score = 85.0 bits (210), Expect = 4e-18
 Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 1   MLKKVMIVEDNELNMKLFRDLIETSGY---IALQTRNGMEALELARQHKPDVIIMDIQLQ 57
           M  +++IV+D +L        I           Q  +G+ A+++A +H P+V++ D+++ 
Sbjct: 1   MSLRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRMP 60

Query: 58  EISGLEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIK 117
            + G+E+   I +     +  VI ++ ++ K   +   K     Y+ KPI  S  M+ +K
Sbjct: 61  RMDGIELVDNILK--LYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALK 118

Query: 118 KYI 120
           + I
Sbjct: 119 QSI 121