RPSBLAST alignment of GI: 254780476 and protein with PDBid: 3cu5
>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141
Score = 85.0 bits (210), Expect = 4e-18
Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 1 MLKKVMIVEDNELNMKLFRDLIETSGY---IALQTRNGMEALELARQHKPDVIIMDIQLQ 57
M +++IV+D +L I Q +G+ A+++A +H P+V++ D+++
Sbjct: 1 MSLRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRMP 60
Query: 58 EISGLEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIK 117
+ G+E+ I + + VI ++ ++ K + K Y+ KPI S M+ +K
Sbjct: 61 RMDGIELVDNILK--LYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALK 118
Query: 118 KYI 120
+ I
Sbjct: 119 QSI 121