HHsearch alignment for GI: 254780477 and conserved domain: cd02951
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=98.02 E-value=6.6e-05 Score=51.03 Aligned_cols=44 Identities=11% Similarity=0.294 Sum_probs=36.0
Q ss_pred HHHHHCCCCCCCEEEE---C-CE---EECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 9998618853657998---9-89---9618999999999999999986039
Q gi|254780477|r 189 RASEDFAIDSTPVFFI---G-GN---LYLGDMSEGVFSKIIDSMIQDSTRR 232 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~V---n-G~---~~~g~~~~~~~~~~id~ll~~~~~~ 232 (232)
T Consensus 75 ~la~~~~v~~tPT~~fld~~gg~~i~~~~Gy~~~~~f~~~L~yv~~~~yk~ 125 (125)
T cd02951 75 ELARKYRVRFTPTVIFLDPEGGKEIARLPGYLPPDEFLAYLEYVQEKAYKK 125 (125)
T ss_pred HHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 999986987677799986999867777259789999999999997186569