HHsearch alignment for GI: 254780477 and conserved domain: cd02995
>cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu
Probab=96.16 E-value=0.0025 Score=41.05 Aligned_cols=31 Identities=29% Similarity=0.568 Sum_probs=23.6
Q ss_pred HHCCCCCCCEEEE--CCE-----EECCCCCHHHHHHHH
Q ss_conf 8618853657998--989-----961899999999999
Q gi|254780477|r 192 EDFAIDSTPVFFI--GGN-----LYLGDMSEGVFSKII 222 (232)
Q Consensus 192 ~~~gi~gTPt~~V--nG~-----~~~g~~~~~~~~~~i 222 (232)
T Consensus 67 ~~~~i~~~Pti~lf~~g~~~~~~~y~G~r~~~~l~~Fi 104 (104)
T cd02995 67 SEFVVDGFPTILFFPAGDKSNPIKYEGDRTLEDLIKFI 104 (104)
T ss_pred HHCCCCCCCEEEEEECCCCCCCEECCCCCCHHHHHHHC
T ss_conf 45485407789999896777756747888999999659