HHsearch alignment for GI: 254780477 and conserved domain: cd03025
>cd03025 DsbA_FrnE_like DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE. FrnE is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=99.44 E-value=3.1e-12 Score=97.36 Aligned_cols=148 Identities=14% Similarity=0.124 Sum_probs=98.5
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH------HH------------------------
Q ss_conf 899997058882064433421134432000020379984332343024------57------------------------
Q gi|254780477|r 67 VTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVS------TV------------------------ 116 (232)
Q Consensus 67 v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~------------------------ 116 (232)
T Consensus 1 ikI~~f~D~vCPWCy~~~~~l~~~~~~-~~~~i~~~~~~f~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (193)
T cd03025 1 LELYYFIDPLCGWCYGFEPLLEKLKEE-YGGGIEVELHLGGLLPGNNARQITKQWRIYVHWHKARIALTGQPFGEDYLEL 79 (193)
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHC
T ss_conf 989999788798899039999999856-6898479998688899999886447999987289999998386235557735
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH
Q ss_conf ---------77666666665321245588888865433211345689987643110000688986405989999999999
Q gi|254780477|r 117 ---------AVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGK 187 (232)
Q Consensus 117 ---------~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 187 (232)
T Consensus 80 ~~~~~~s~~~~~~~~~a~~~~~~~~~~~~~~l~~a~F~~g~nI~d~~vL~~ia~~~Gld~~~~~~~l~s~~~~~~v~~d~ 159 (193)
T cd03025 80 LLFDLDSAPASRAIKAARLQGPERLLEMLKAIQRAHYVEGRDLADTEVLRELAIELGLDVEEFLEDFQSDEAKQAIQEDQ 159 (193)
T ss_pred CCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 77877819999999999986844799999999999984688979899999999991999999999976939999999999
Q ss_pred HHHHHHCCCCCCCEEEEC---CE--EECCCCCHH
Q ss_conf 999986188536579989---89--961899999
Q gi|254780477|r 188 KRASEDFAIDSTPVFFIG---GN--LYLGDMSEG 216 (232)
Q Consensus 188 ~~~~~~~gi~gTPt~~Vn---G~--~~~g~~~~~ 216 (232)
T Consensus 160 ~~a-~~~Gi~gVPt~Vi~d~~~~~~~~~g~~~~~ 192 (193)
T cd03025 160 KLA-RELGINGFPTLVLEDDNGEGILLTGYYPYE 192 (193)
T ss_pred HHH-HHCCCCCCCEEEEEECCCEEEEECCCCCCC
T ss_conf 999-987998524699997897179832572288