HHsearch results for GI: 254780477 and protein with PDBid: 1hyu_A
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thioredoxin reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.39 E-value=0.018 Score=34.18 Aligned_cols=155 Identities=13% Similarity=0.165 Sum_probs=69.2
Q ss_pred CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH------HHHHHHHHHHHHHHHHHHHH
Q ss_conf 689888899997058882064433421134432000020379984332343024------57776666666653212455
Q gi|254780477|r 61 GQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVS------TVAVMLARCAEKRMDGGYWG 134 (232)
Q Consensus 61 G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~~~~~~~~~ 134 (232)
.+-..||+++.|.| .|+.|..+.. +...+.+. ..++.+........... ............-....|..
T Consensus 15 ~~~~~~v~l~~~~~-~~~~~~~~~~-~~~~~~~~---~~~i~~~~~~~~~~~~p~~~~~~~~~~~~i~f~g~p~g~Ef~s 89 (521)
T 1hyu_A 15 EKLTKPVELIATLD-DSAKSAEIKE-LLAEIAEL---SDKVTFKEDNTLPVRKPSFLITNPGSQQGPRFAGSPLGHEFTS 89 (521)
T ss_dssp TTCCSCEEEEEECC-SSHHHHHHHH-HHHHHHTT---CTTEEEEECTTSSSCSSEEEEECTTCCCSCEEESCCCGGGHHH
T ss_pred HHCCCCEEEEEECC-CCHHHHHHHH-HHHHHHHH---CCCEEEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHH
T ss_conf 85899889999848-9754899999-99999974---7976999747876668629993599743069961687355799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHCCHHHHHHHHH----------------HHHHHHHHC
Q ss_conf 888888654332113456899876431100----006889864059899999999----------------999999861
Q gi|254780477|r 135 FVSLLFNKQDDWINSKNYRDALLNMAKFAG----FSKNDFDTCLNDQNILDDIKA----------------GKKRASEDF 194 (232)
Q Consensus 135 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g----~~~~~~~~~~~~~~~~~~i~~----------------~~~~~~~~~ 194 (232)
+...++..-. +....++...+..++.. +...---.|-.=+.....+.. ...+.++.+
T Consensus 90 ~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~vs~~C~~Cp~~v~~~~~~a~~n~~i~~~~i~~~~~~~~~~~~ 166 (521)
T 1hyu_A 90 LVLALLWTGG---HPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITER 166 (521)
T ss_dssp HHHHHHHHTT---CCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHT
T ss_pred HHHHHHHHCC---CCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHCHHHHHHH
T ss_conf 9999998559---9889899999999727887279999668999977999999999863997169999830177889864
Q ss_pred CCCCCCEEEECCEEE-CCCCCHHHHHHHHH
Q ss_conf 885365799898996-18999999999999
Q gi|254780477|r 195 AIDSTPVFFIGGNLY-LGDMSEGVFSKIID 223 (232)
Q Consensus 195 gi~gTPt~~VnG~~~-~g~~~~~~~~~~id 223 (232)
+|.|+|+++|||+.+ .|..+.+++...++
T Consensus 167 ~~~~vp~~~~~~~~~~~g~~~~~~~~~~~~ 196 (521)
T 1hyu_A 167 NVMGVPAVFVNGKEFGQGRMTLTEIVAKVD 196 (521)
T ss_dssp TCCSSSEEEETTEEEEESCCCHHHHHHHHC
T ss_pred CCCCCCEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 867578064278401135112999976532