HHsearch results for GI: 254780477 and protein with PDBid: 1hyu_A

>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thioredoxin reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.39  E-value=0.018  Score=34.18  Aligned_cols=155  Identities=13%  Similarity=0.165  Sum_probs=69.2

Q ss_pred             CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH------HHHHHHHHHHHHHHHHHHHH
Q ss_conf             689888899997058882064433421134432000020379984332343024------57776666666653212455
Q gi|254780477|r   61 GQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVS------TVAVMLARCAEKRMDGGYWG  134 (232)
Q Consensus        61 G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~~~~~~~~~  134 (232)
                      .+-..||+++.|.| .|+.|..+.. +...+.+.   ..++.+...........      ............-....|..
T Consensus        15 ~~~~~~v~l~~~~~-~~~~~~~~~~-~~~~~~~~---~~~i~~~~~~~~~~~~p~~~~~~~~~~~~i~f~g~p~g~Ef~s   89 (521)
T 1hyu_A           15 EKLTKPVELIATLD-DSAKSAEIKE-LLAEIAEL---SDKVTFKEDNTLPVRKPSFLITNPGSQQGPRFAGSPLGHEFTS   89 (521)
T ss_dssp             TTCCSCEEEEEECC-SSHHHHHHHH-HHHHHHTT---CTTEEEEECTTSSSCSSEEEEECTTCCCSCEEESCCCGGGHHH
T ss_pred             HHCCCCEEEEEECC-CCHHHHHHHH-HHHHHHHH---CCCEEEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHH
T ss_conf             85899889999848-9754899999-99999974---7976999747876668629993599743069961687355799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHCCHHHHHHHHH----------------HHHHHHHHC
Q ss_conf             888888654332113456899876431100----006889864059899999999----------------999999861
Q gi|254780477|r  135 FVSLLFNKQDDWINSKNYRDALLNMAKFAG----FSKNDFDTCLNDQNILDDIKA----------------GKKRASEDF  194 (232)
Q Consensus       135 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g----~~~~~~~~~~~~~~~~~~i~~----------------~~~~~~~~~  194 (232)
                      +...++..-.   +....++...+..++..    +...---.|-.=+.....+..                ...+.++.+
T Consensus        90 ~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~vs~~C~~Cp~~v~~~~~~a~~n~~i~~~~i~~~~~~~~~~~~  166 (521)
T 1hyu_A           90 LVLALLWTGG---HPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITER  166 (521)
T ss_dssp             HHHHHHHHTT---CCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHT
T ss_pred             HHHHHHHHCC---CCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHCHHHHHHH
T ss_conf             9999998559---9889899999999727887279999668999977999999999863997169999830177889864


Q ss_pred             CCCCCCEEEECCEEE-CCCCCHHHHHHHHH
Q ss_conf             885365799898996-18999999999999
Q gi|254780477|r  195 AIDSTPVFFIGGNLY-LGDMSEGVFSKIID  223 (232)
Q Consensus       195 gi~gTPt~~VnG~~~-~g~~~~~~~~~~id  223 (232)
                      +|.|+|+++|||+.+ .|..+.+++...++
T Consensus       167 ~~~~vp~~~~~~~~~~~g~~~~~~~~~~~~  196 (521)
T 1hyu_A          167 NVMGVPAVFVNGKEFGQGRMTLTEIVAKVD  196 (521)
T ss_dssp             TCCSSSEEEETTEEEEESCCCHHHHHHHHC
T ss_pred             CCCCCCEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf             867578064278401135112999976532