HHsearch results for GI: 254780477 and protein with PDBid: 1qgv_A
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=92.08 E-value=0.13 Score=28.73 Aligned_cols=35 Identities=11% Similarity=0.194 Sum_probs=26.1
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 16898888999970588820644334211344320
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
+-+.+-+++|+.|....||+|+.+.+.+.....++
T Consensus 18 I~~~~~k~VvV~F~a~wC~~C~~~~p~l~~la~~~ 52 (142)
T 1qgv_A 18 ILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKV 52 (142)
T ss_dssp HHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 97289988999995995888778442199999996