HHsearch results for GI: 254780477 and protein with PDBid: 1v98_A

>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus HB8}
Probab=98.04  E-value=2.3e-05  Score=52.56  Aligned_cols=84  Identities=15%  Similarity=0.300  Sum_probs=58.4

Q ss_pred             CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88899997058882064433421134432000020379984332343024577766666666532124558888886543
Q gi|254780477|r   65 APVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQD  144 (232)
Q Consensus        65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~  144 (232)
                      .+.+|+.|+...|++|+.+.+.+....+++...   +.++...                                     
T Consensus        50 ~k~vlV~F~a~WC~~Ck~~~p~l~~~~~~~~~~---v~~~~id-------------------------------------   89 (140)
T 1v98_A           50 APLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVN-------------------------------------   89 (140)
T ss_dssp             CCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEE-------------------------------------
T ss_pred             CCCEEEEEECCCCHHHHHHCCCHHHHHHHHCCE---EEEEEEE-------------------------------------
T ss_conf             997999998999976884464104888740636---8999995-------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHH
Q ss_conf             321134568998764311000068898640598999999999999998618853657998--9899---61899999999
Q gi|254780477|r  145 DWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFS  219 (232)
Q Consensus       145 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~  219 (232)
                                            .      ..+           ....++++|+++||+++  ||+.   +.|..+.+++.
T Consensus        90 ----------------------~------~~~-----------~~l~~~~~V~~~Pt~~~~k~G~~v~~~~G~~~~~~l~  130 (140)
T 1v98_A           90 ----------------------V------DEH-----------PGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLE  130 (140)
T ss_dssp             ----------------------T------TTC-----------HHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHH
T ss_pred             ----------------------C------CCC-----------HHHHHHHCCCCCCEEEEEECCEEEEEEECCCCHHHHH
T ss_conf             ----------------------5------556-----------8889982977348699998999989997999999999


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q gi|254780477|r  220 KIIDSMIQ  227 (232)
Q Consensus       220 ~~id~ll~  227 (232)
                      +.|+++|+
T Consensus       131 ~~I~~~L~  138 (140)
T 1v98_A          131 ERLRPYLE  138 (140)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
T ss_conf             99999877