HHsearch results for GI: 254780477 and protein with PDBid: 1v98_A
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus HB8}
Probab=98.04 E-value=2.3e-05 Score=52.56 Aligned_cols=84 Identities=15% Similarity=0.300 Sum_probs=58.4
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88899997058882064433421134432000020379984332343024577766666666532124558888886543
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQD 144 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~ 144 (232)
.+.+|+.|+...|++|+.+.+.+....+++... +.++...
T Consensus 50 ~k~vlV~F~a~WC~~Ck~~~p~l~~~~~~~~~~---v~~~~id------------------------------------- 89 (140)
T 1v98_A 50 APLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVN------------------------------------- 89 (140)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEE-------------------------------------
T ss_pred CCCEEEEEECCCCHHHHHHCCCHHHHHHHHCCE---EEEEEEE-------------------------------------
T ss_conf 997999998999976884464104888740636---8999995-------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHH
Q ss_conf 321134568998764311000068898640598999999999999998618853657998--9899---61899999999
Q gi|254780477|r 145 DWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFS 219 (232)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~ 219 (232)
. ..+ ....++++|+++||+++ ||+. +.|..+.+++.
T Consensus 90 ----------------------~------~~~-----------~~l~~~~~V~~~Pt~~~~k~G~~v~~~~G~~~~~~l~ 130 (140)
T 1v98_A 90 ----------------------V------DEH-----------PGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLE 130 (140)
T ss_dssp ----------------------T------TTC-----------HHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHH
T ss_pred ----------------------C------CCC-----------HHHHHHHCCCCCCEEEEEECCEEEEEEECCCCHHHHH
T ss_conf ----------------------5------556-----------8889982977348699998999989997999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780477|r 220 KIIDSMIQ 227 (232)
Q Consensus 220 ~~id~ll~ 227 (232)
+.|+++|+
T Consensus 131 ~~I~~~L~ 138 (140)
T 1v98_A 131 ERLRPYLE 138 (140)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
T ss_conf 99999877