HHsearch results for GI: 254780477 and protein with PDBid: 3feu_A
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio fischeri ES114}
Probab=99.93 E-value=1.5e-26 Score=186.48 Aligned_cols=165 Identities=13% Similarity=0.145 Sum_probs=124.7
Q ss_pred CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11689888899997058882064433421134432000020379984332343024577766666666532124558888
Q gi|254780477|r 59 SIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSL 138 (232)
Q Consensus 59 ~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 138 (232)
..|++++||+|+||+||.||||++|++.+.+++++++.+. .+.+.+.+..... ...++...........++.+++.
T Consensus 16 ~~~~~d~~v~ivEf~dy~Cp~C~~~~~~l~~~~k~~~~~~---~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~ 91 (185)
T 3feu_A 16 TSLENDGMAPVTEVFALSCGHCRNMENFLPVISQEAGTDI---GKMHITFNQSAHI-ASMFYYAAEMQVDGAPDHAFMED 91 (185)
T ss_dssp SCCTTSCCCSEEEEECTTCHHHHHHGGGHHHHHHHHTSCC---EEEECCSSSHHHH-HHHHHHHHHTTSSSSCCHHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC---CEEEEECCCCCCC-HHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 8888999848999972788050536777688998556554---3267752665321-89999999999862506899999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEC---CCC
Q ss_conf 88654332113--4568998764311000068898640598999999999999998618853657998989961---899
Q gi|254780477|r 139 LFNKQDDWINS--KNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYL---GDM 213 (232)
Q Consensus 139 ~~~~q~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~---g~~ 213 (232)
+|..+...... ......+..++...|++...+..|+.+......+.++...+ +.+||+|||||+|||+++. +..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~gI~gTPt~vInGk~~v~~~~~~ 170 (185)
T 3feu_A 92 LFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLS-EKSGISSVPTFVVNGKYNVLIGGHD 170 (185)
T ss_dssp HHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHH-HHHTCCSSSEEEETTTEEECGGGCS
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCEEEECCEEEECCCCCC
T ss_conf 999988764212320016899999873776899999976077777999999999-9817888858999798973588877
Q ss_pred CHHHHHHHHHHHHHH
Q ss_conf 999999999999998
Q gi|254780477|r 214 SEGVFSKIIDSMIQD 228 (232)
Q Consensus 214 ~~~~~~~~id~ll~~ 228 (232)
+++.+.++||.||+|
T Consensus 171 ~~~~l~~~i~~Ll~K 185 (185)
T 3feu_A 171 DPKQIADTIRYLLEK 185 (185)
T ss_dssp SHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHCC
T ss_conf 999999999999749