HHsearch results for GI: 254780477 and protein with PDBid: 3gnj_A

>3gnj_A Thioredoxin domain protein; APC92103, structural genomics, PSI-2, protein structure initiative; 1.99A {Desulfitobacterium hafniense dcb-2}

Probab=98.04  E-value=2.3e-05  Score=52.58  Aligned_cols=38  Identities=18%  Similarity=0.512  Sum_probs=32.5

Q ss_pred             HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf             98618853657998--9899---61899999999999999998
Q gi|254780477|r  191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD  228 (232)
Q Consensus       191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~  228 (232)
                      +++++|+++||+++  ||+.   +.|..+.++++..|+.+|++
T Consensus        69 ~~~~~I~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~  111 (111)
T 3gnj_A           69 FQRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADVLED  111 (111)
T ss_dssp             HHHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHHHHC
T ss_pred             HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf             9971996268799997997999997899999999999998667