HHsearch results for GI: 254780477 and protein with PDBid: 3gv1_A
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain ATCC 700825 / FA 1090), DSBC, structural genomics, unknown function; 2.00A {Neisseria gonorrhoeae fa 1090}
Probab=99.74 E-value=8.9e-19 Score=137.31 Aligned_cols=132 Identities=11% Similarity=0.122 Sum_probs=77.2
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41168988889999705888206443342113443200002037998433234302457776666666653212455888
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVS 137 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 137 (232)
.+.| ++|++|+||+||+||||+++++++.+.. +.....+.+...+.+... ...+....+..+ ..+.+..
T Consensus 9 ~v~G--nak~~iv~F~D~~CpyC~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~s--~~~a~~~~~~~d--~~~a~~~ 77 (147)
T 3gv1_A 9 EVRG--NGKLKVAVFSDPDCPFCKRLEHEFEKMT-----DVTVYSFMMPIAGLHPDA--ARKAQILWCQPD--RAKAWTD 77 (147)
T ss_dssp EEET--TCCEEEEEEECTTCHHHHHHHHHHTTCC-----SEEEEEEECCCTTTCTTH--HHHHHHHHTSSS--HHHHHHH
T ss_pred CCCC--CCCEEEEEEECCCCHHHHHHHHHHHHHC-----CCEEEEEEECCCCCCCHH--HHHHHHHHHCCC--HHHHHHH
T ss_conf 0268--8998999998979872898999987505-----730699980377888389--999999997427--6899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCEEECCCCCHH
Q ss_conf 8886543321134568998764311000068898640598999999999999998618853657998-989961899999
Q gi|254780477|r 138 LLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI-GGNLYLGDMSEG 216 (232)
Q Consensus 138 ~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V-nG~~~~g~~~~~ 216 (232)
.....+.. ..+......+.++.+. ++.+||+||||||+ ||+.++|..+.+
T Consensus 78 ~~~~~~~~----------------------------~~~~~~~~~i~~~~~l-a~~lGv~gTPt~~~~nG~~i~G~~~~~ 128 (147)
T 3gv1_A 78 WMRKGKFP----------------------------VGGSICDNPVAETTSL-GEQFGFNGTPTLVFPNGRTQSGYSPMP 128 (147)
T ss_dssp HHHHCCCC----------------------------TTCCCCSCSHHHHHHH-HHHTTCCSSCEEECTTSCEEESCCCTT
T ss_pred HHHCCCCC----------------------------CCHHHHHHHHHHHHHH-HHHHCCCCCCEEEEECCEEECCCCCHH
T ss_conf 99748887----------------------------5236676589999999-999299778859984994855999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999986
Q gi|254780477|r 217 VFSKIIDSMIQDS 229 (232)
Q Consensus 217 ~~~~~id~ll~~~ 229 (232)
+|+++|++.+++.
T Consensus 129 ~l~~~i~~~~k~g 141 (147)
T 3gv1_A 129 QLEEIIRKNQQEG 141 (147)
T ss_dssp HHHHHHHHTSCC-
T ss_pred HHHHHHHHHHHCC
T ss_conf 9999999998258