HHsearch results for GI: 254780477 and protein with PDBid: 3gv1_A

>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain ATCC 700825 / FA 1090), DSBC, structural genomics, unknown function; 2.00A {Neisseria gonorrhoeae fa 1090}
Probab=99.74  E-value=8.9e-19  Score=137.31  Aligned_cols=132  Identities=11%  Similarity=0.122  Sum_probs=77.2

Q ss_pred             CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             41168988889999705888206443342113443200002037998433234302457776666666653212455888
Q gi|254780477|r   58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVS  137 (232)
Q Consensus        58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~  137 (232)
                      .+.|  ++|++|+||+||+||||+++++++.+..     +.....+.+...+.+...  ...+....+..+  ..+.+..
T Consensus         9 ~v~G--nak~~iv~F~D~~CpyC~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~s--~~~a~~~~~~~d--~~~a~~~   77 (147)
T 3gv1_A            9 EVRG--NGKLKVAVFSDPDCPFCKRLEHEFEKMT-----DVTVYSFMMPIAGLHPDA--ARKAQILWCQPD--RAKAWTD   77 (147)
T ss_dssp             EEET--TCCEEEEEEECTTCHHHHHHHHHHTTCC-----SEEEEEEECCCTTTCTTH--HHHHHHHHTSSS--HHHHHHH
T ss_pred             CCCC--CCCEEEEEEECCCCHHHHHHHHHHHHHC-----CCEEEEEEECCCCCCCHH--HHHHHHHHHCCC--HHHHHHH
T ss_conf             0268--8998999998979872898999987505-----730699980377888389--999999997427--6899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCEEECCCCCHH
Q ss_conf             8886543321134568998764311000068898640598999999999999998618853657998-989961899999
Q gi|254780477|r  138 LLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI-GGNLYLGDMSEG  216 (232)
Q Consensus       138 ~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V-nG~~~~g~~~~~  216 (232)
                      .....+..                            ..+......+.++.+. ++.+||+||||||+ ||+.++|..+.+
T Consensus        78 ~~~~~~~~----------------------------~~~~~~~~~i~~~~~l-a~~lGv~gTPt~~~~nG~~i~G~~~~~  128 (147)
T 3gv1_A           78 WMRKGKFP----------------------------VGGSICDNPVAETTSL-GEQFGFNGTPTLVFPNGRTQSGYSPMP  128 (147)
T ss_dssp             HHHHCCCC----------------------------TTCCCCSCSHHHHHHH-HHHTTCCSSCEEECTTSCEEESCCCTT
T ss_pred             HHHCCCCC----------------------------CCHHHHHHHHHHHHHH-HHHHCCCCCCEEEEECCEEECCCCCHH
T ss_conf             99748887----------------------------5236676589999999-999299778859984994855999999


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999986
Q gi|254780477|r  217 VFSKIIDSMIQDS  229 (232)
Q Consensus       217 ~~~~~id~ll~~~  229 (232)
                      +|+++|++.+++.
T Consensus       129 ~l~~~i~~~~k~g  141 (147)
T 3gv1_A          129 QLEEIIRKNQQEG  141 (147)
T ss_dssp             HHHHHHHHTSCC-
T ss_pred             HHHHHHHHHHHCC
T ss_conf             9999999998258