HHsearch results for GI: 254780477 and protein with PDBid: 3kzq_A
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=99.75 E-value=8.4e-17 Score=124.83 Aligned_cols=162 Identities=11% Similarity=0.133 Sum_probs=122.5
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCH--------------------------------
Q ss_conf 889999705888206443342113443200002037998433234302--------------------------------
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSV-------------------------------- 113 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 113 (232)
.++|+.|+|+.||||+.+++.+....+++ .....+.++...+.....
T Consensus 2 ~~ki~~~~D~~Cpwcy~~~~~l~~l~~~~-~~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (208)
T 3kzq_A 2 NIKLYYVHDPMCSWCWGYKPTIEKLKQQL-PGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWK 80 (208)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHS-CTTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHHH
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC
T ss_conf 16999998488986999999999999877-99758999866646444568889999999999999999997643810003
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf -----457776666666653212455888888654332113456899876431100006889864059899999999999
Q gi|254780477|r 114 -----STVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKK 188 (232)
Q Consensus 114 -----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 188 (232)
.........+.....++..++++..+++.....+......+.+..++.+.|++...+..++++.+....+..+.+
T Consensus 81 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~g~di~d~~~l~~ia~~~Gld~~~~~~~~~s~~~~~~l~~~~~ 160 (208)
T 3kzq_A 81 LCTPVRSTYQSCRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQLS 160 (208)
T ss_dssp HSCCBCCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56788778999999999996793999999999999987506421789988788739999999999861699999999999
Q ss_pred HHHHHCCCCCCCEEEE--CCEEEC---CCCCHHHHHHHHHHHHHHH
Q ss_conf 9998618853657998--989961---8999999999999999986
Q gi|254780477|r 189 RASEDFAIDSTPVFFI--GGNLYL---GDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~V--nG~~~~---g~~~~~~~~~~id~ll~~~ 229 (232)
.+ .+.||+|||||+| ||+++. |..+.+++...|++.+.+.
T Consensus 161 ~a-~~~gv~GvPtfvv~~~~~~~~~~~g~~~~~~~~~~l~e~~~~~ 205 (208)
T 3kzq_A 161 LA-KSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIEN 205 (208)
T ss_dssp HH-HHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHHHT
T ss_pred HH-HHCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99-9859975887999989988882688768999999999999972