Query gi|254780477|ref|YP_003064890.1| DSBA oxidoreductase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 232
No_of_seqs 133 out of 3299
Neff 10.1
Searched_HMMs 23785
Date Mon May 30 11:44:45 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780477.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f4s_A Alpha-DSBA1, putative u 100.0 9.1E-34 3.8E-38 232.1 16.1 175 54-230 28-214 (226)
2 3gha_A Disulfide bond formatio 100.0 1.4E-33 6.1E-38 230.8 16.3 184 47-231 11-196 (202)
3 3bci_A Disulfide bond protein 100.0 1.3E-31 5.4E-36 218.5 12.5 173 57-230 3-181 (186)
4 3gmf_A Protein-disulfide isome 100.0 9.8E-31 4.1E-35 212.9 16.6 174 54-230 4-200 (205)
5 3hd5_A Thiol:disulfide interch 100.0 3.6E-29 1.5E-33 203.0 16.1 171 54-231 14-188 (195)
6 3h93_A Thiol:disulfide interch 100.0 3.6E-29 1.5E-33 203.0 15.5 171 55-231 15-188 (192)
7 3gyk_A 27KDA outer membrane pr 100.0 1.3E-28 5.5E-33 199.4 17.7 164 55-229 12-175 (175)
8 2rem_A Disulfide oxidoreductas 100.0 4.2E-28 1.7E-32 196.3 16.9 171 58-231 18-188 (193)
9 3hz8_A Thiol:disulfide interch 100.0 2.8E-27 1.2E-31 191.0 17.6 172 56-231 15-187 (193)
10 2znm_A Thiol:disulfide interch 99.9 3.2E-26 1.3E-30 184.4 16.9 173 54-231 11-184 (195)
11 1z6m_A Conserved hypothetical 99.9 1.1E-26 4.8E-31 187.2 12.9 164 49-224 11-175 (175)
12 1bed_A DSBA oxidoreductase; TC 99.9 6E-26 2.5E-30 182.7 15.8 167 59-229 11-181 (181)
13 3c7m_A Thiol:disulfide interch 99.9 6.6E-26 2.8E-30 182.4 13.1 166 62-228 14-195 (195)
14 3feu_A Putative lipoprotein; a 99.9 1.5E-26 6.2E-31 186.5 8.3 165 59-228 16-185 (185)
15 3l9v_A Putative thiol-disulfid 99.9 3.5E-25 1.5E-29 177.8 12.8 163 64-229 14-185 (189)
16 3l9s_A Thiol:disulfide interch 99.9 1.5E-24 6.4E-29 173.8 12.7 167 58-229 13-191 (191)
17 3gn3_A Putative protein-disulf 99.9 9.9E-24 4.2E-28 168.6 10.8 159 63-222 12-181 (182)
18 1v58_A Thiol:disulfide interch 99.8 1.1E-19 4.6E-24 143.1 10.2 143 56-229 88-235 (241)
19 1eej_A Thiol:disulfide interch 99.8 1.1E-19 4.7E-24 143.0 9.3 138 55-231 76-215 (216)
20 2in3_A Hypothetical protein; D 99.8 3E-17 1.3E-21 127.7 17.0 162 66-229 7-212 (216)
21 1t3b_A Thiol:disulfide interch 99.8 5.9E-19 2.5E-23 138.5 7.0 133 56-226 77-210 (211)
22 3gl5_A Putative DSBA oxidoredu 99.8 2.1E-17 8.8E-22 128.6 13.7 163 66-230 2-216 (239)
23 3kzq_A Putative uncharacterize 99.8 8.4E-17 3.5E-21 124.8 16.6 162 66-229 2-205 (208)
24 3gv1_A Disulfide interchange p 99.7 8.9E-19 3.7E-23 137.3 4.5 132 58-229 9-141 (147)
25 2imf_A HCCA isomerase, 2-hydro 99.6 7.6E-14 3.2E-18 106.2 13.8 159 67-229 1-198 (203)
26 3fz5_A Possible 2-hydroxychrom 99.5 7.8E-13 3.3E-17 99.8 14.8 154 65-222 3-197 (202)
27 1r4w_A Glutathione S-transfera 99.4 3.1E-11 1.3E-15 89.7 15.0 152 65-222 4-210 (226)
28 1yzx_A Glutathione S-transfera 99.4 3.1E-11 1.3E-15 89.6 15.0 151 66-222 5-210 (226)
29 1un2_A DSBA, thiol-disulfide i 99.1 1.5E-10 6.4E-15 85.3 7.0 81 62-144 110-192 (197)
30 1un2_A DSBA, thiol-disulfide i 99.1 1.7E-10 7.2E-15 85.0 6.3 78 151-229 4-90 (197)
31 3dml_A Putative uncharacterize 98.6 1.6E-07 6.7E-12 66.2 8.5 93 62-230 15-113 (116)
32 2hyx_A Protein DIPZ; thioredox 98.3 1.2E-06 4.8E-11 60.8 6.9 120 60-230 77-202 (352)
33 1nho_A Probable thioredoxin; b 98.3 5.3E-07 2.2E-11 62.9 4.7 37 191-227 48-85 (85)
34 1fo5_A Thioredoxin; disulfide 98.2 2.2E-06 9.4E-11 58.9 6.3 83 65-226 2-85 (85)
35 3kp9_A Vkorc1/thioredoxin doma 98.2 2.4E-06 1E-10 58.7 6.1 41 190-230 243-283 (291)
36 3hz4_A Thioredoxin; NYSGXRC, P 98.2 1.3E-05 5.4E-10 54.2 9.4 40 191-230 71-115 (140)
37 2e0q_A Thioredoxin; electron t 98.1 1E-05 4.3E-10 54.8 7.5 38 191-228 62-104 (104)
38 2hls_A Protein disulfide oxido 98.1 1.8E-05 7.7E-10 53.2 8.4 40 189-228 187-227 (243)
39 3p2a_A Thioredoxin 2, putative 98.1 2.8E-05 1.2E-09 52.0 9.3 39 191-229 102-145 (148)
40 2trx_A Thioredoxin; electron t 98.0 5.1E-05 2.2E-09 50.3 10.5 37 191-227 67-108 (108)
41 1v98_A Thioredoxin; oxidoreduc 98.0 2.3E-05 9.6E-10 52.6 8.6 84 65-227 50-138 (140)
42 3gnj_A Thioredoxin domain prot 98.0 2.3E-05 9.5E-10 52.6 8.5 38 191-228 69-111 (111)
43 2b5x_A YKUV protein, TRXY; thi 98.0 1.4E-05 5.8E-10 54.0 7.3 116 63-230 27-148 (148)
44 3hxs_A Thioredoxin, TRXP; elec 98.0 1.8E-05 7.7E-10 53.2 7.9 38 191-228 98-140 (141)
45 2l57_A Uncharacterized protein 98.0 4.2E-05 1.8E-09 50.9 9.3 36 191-226 75-116 (126)
46 1w4v_A Thioredoxin, mitochondr 98.0 6.1E-05 2.6E-09 49.8 9.6 37 190-226 77-118 (119)
47 2ppt_A Thioredoxin-2; thiredox 97.9 4E-05 1.7E-09 51.0 8.3 86 62-227 62-152 (155)
48 3emx_A Thioredoxin; structural 97.9 4.1E-05 1.7E-09 51.0 8.4 39 190-228 84-127 (135)
49 3die_A Thioredoxin, TRX; elect 97.9 3.2E-05 1.3E-09 51.6 7.1 35 191-225 66-105 (106)
50 2o8v_B Thioredoxin 1; disulfid 97.9 2.5E-05 1.1E-09 52.3 6.6 36 192-227 88-128 (128)
51 1t00_A Thioredoxin, TRX; struc 97.9 6.7E-05 2.8E-09 49.6 8.5 38 191-228 70-112 (112)
52 3dxb_A Thioredoxin N-terminall 97.9 4.8E-05 2E-09 50.5 7.5 38 192-229 78-120 (222)
53 2ywm_A Glutaredoxin-like prote 97.8 8.7E-05 3.7E-09 48.9 8.7 43 189-231 180-224 (229)
54 1zma_A Bacterocin transport ac 97.8 0.00013 5.3E-09 47.9 9.4 33 190-222 79-116 (118)
55 3lor_A Thiol-disulfide isomera 97.8 4E-05 1.7E-09 51.0 6.8 40 192-231 114-159 (160)
56 1kng_A Thiol:disulfide interch 97.8 7.5E-05 3.1E-09 49.3 8.2 41 191-231 110-156 (156)
57 2yzu_A Thioredoxin; redox prot 97.8 8.2E-05 3.4E-09 49.1 8.3 38 191-228 65-107 (109)
58 1nsw_A Thioredoxin, TRX; therm 97.8 2.3E-05 9.7E-10 52.5 5.5 83 66-227 18-105 (105)
59 2i4a_A Thioredoxin; acidophIle 97.8 7E-05 3E-09 49.5 7.9 34 191-224 67-105 (107)
60 2dj1_A Protein disulfide-isome 97.8 0.00011 4.7E-09 48.2 8.8 39 190-228 83-125 (140)
61 2voc_A Thioredoxin; electron t 97.8 2.7E-05 1.1E-09 52.1 5.5 39 191-229 64-107 (112)
62 1fb6_A Thioredoxin M; electron 97.8 0.00014 5.7E-09 47.7 9.1 36 191-226 65-105 (105)
63 2qgv_A Hydrogenase-1 operon pr 97.8 8.6E-05 3.6E-09 48.9 8.0 43 190-232 83-130 (140)
64 1gh2_A Thioredoxin-like protei 97.8 0.00015 6.4E-09 47.3 8.8 36 191-227 67-107 (107)
65 1dby_A Chloroplast thioredoxin 97.8 7.1E-05 3E-09 49.4 7.0 36 191-226 66-106 (107)
66 2es7_A Q8ZP25_salty, putative 97.7 8.4E-05 3.5E-09 49.0 7.3 40 189-228 82-126 (142)
67 1thx_A Thioredoxin, thioredoxi 97.7 0.0002 8.4E-09 46.6 9.1 39 190-228 71-114 (115)
68 2kuc_A Putative disulphide-iso 97.7 0.00015 6.1E-09 47.5 8.1 39 191-229 79-123 (130)
69 3or5_A Thiol:disulfide interch 97.7 0.00021 8.7E-09 46.5 8.4 117 62-229 31-153 (165)
70 3d6i_A Monothiol glutaredoxin- 97.7 0.00074 3.1E-08 43.0 11.0 38 191-229 69-111 (112)
71 2diz_A Thioredoxin domain-cont 97.7 5.8E-05 2.5E-09 50.0 5.4 37 191-227 73-114 (117)
72 2fwh_A Thiol:disulfide interch 97.7 0.0003 1.3E-08 45.5 9.0 36 191-226 84-127 (134)
73 1zzo_A RV1677; thioredoxin fol 97.6 0.00012 5.1E-09 48.0 6.8 39 190-228 93-136 (136)
74 1r26_A Thioredoxin; redox-acti 97.6 0.00061 2.6E-08 43.6 10.1 38 191-229 83-125 (125)
75 2i1u_A Thioredoxin, TRX, MPT46 97.6 5.6E-05 2.3E-09 50.1 4.6 39 190-228 76-119 (121)
76 2vm1_A Thioredoxin, thioredoxi 97.6 0.00038 1.6E-08 44.8 8.5 38 191-229 74-116 (118)
77 2wz9_A Glutaredoxin-3; protein 97.6 0.00039 1.6E-08 44.8 8.5 36 191-227 78-118 (153)
78 1x5d_A Protein disulfide-isome 97.6 0.0011 4.5E-08 42.0 10.6 39 191-229 76-119 (133)
79 3erw_A Sporulation thiol-disul 97.6 0.00029 1.2E-08 45.6 7.7 37 59-96 29-65 (145)
80 2r2j_A Thioredoxin domain-cont 97.5 0.00054 2.3E-08 43.9 9.0 27 65-91 22-48 (382)
81 1ep7_A Thioredoxin CH1, H-type 97.5 0.0004 1.7E-08 44.7 8.3 35 191-226 71-110 (112)
82 3gl3_A Putative thiol:disulfid 97.5 0.0007 2.9E-08 43.2 9.5 113 60-228 23-143 (152)
83 1xwb_A Thioredoxin; dimerizati 97.5 0.00061 2.6E-08 43.5 9.1 30 65-94 20-49 (106)
84 1xfl_A Thioredoxin H1; AT3G510 97.5 0.00045 1.9E-08 44.4 8.2 35 191-226 84-123 (124)
85 2j23_A Thioredoxin; immune pro 97.5 0.0007 2.9E-08 43.2 9.1 34 190-224 80-118 (121)
86 3d22_A TRXH4, thioredoxin H-ty 97.5 0.00072 3E-08 43.1 9.1 38 191-229 92-134 (139)
87 2ju5_A Thioredoxin disulfide i 97.5 0.0008 3.4E-08 42.8 9.2 39 190-228 108-153 (154)
88 3fw2_A Thiol-disulfide oxidore 97.5 0.00056 2.3E-08 43.8 8.3 39 191-229 109-150 (150)
89 3fkf_A Thiol-disulfide oxidore 97.5 0.00045 1.9E-08 44.4 7.8 113 64-228 32-147 (148)
90 3lwa_A Secreted thiol-disulfid 97.4 0.00013 5.5E-09 47.7 4.9 123 57-229 51-183 (183)
91 3m9j_A Thioredoxin; oxidoreduc 97.4 0.00062 2.6E-08 43.5 8.3 35 191-226 66-105 (105)
92 2b1k_A Thiol:disulfide interch 97.4 0.00048 2E-08 44.2 7.7 40 191-230 118-163 (168)
93 1jfu_A Thiol:disulfide interch 97.4 0.0013 5.4E-08 41.5 9.8 41 58-98 53-93 (186)
94 3eyt_A Uncharacterized protein 97.4 0.00055 2.3E-08 43.8 7.7 40 192-231 111-156 (158)
95 2dml_A Protein disulfide-isome 97.4 0.003 1.3E-07 39.2 11.4 38 191-228 82-125 (130)
96 2qsi_A Putative hydrogenase ex 97.4 0.0023 9.5E-08 39.9 10.7 40 191-230 82-126 (137)
97 2vim_A Thioredoxin, TRX; thior 97.4 0.00045 1.9E-08 44.4 7.1 33 191-224 65-102 (104)
98 1a8l_A Protein disulfide oxido 97.4 0.0022 9.3E-08 40.0 10.3 38 189-226 183-225 (226)
99 3kcm_A Thioredoxin family prot 97.3 0.00011 4.8E-09 48.1 3.3 116 60-231 23-147 (154)
100 2h30_A Thioredoxin, peptide me 97.3 0.00085 3.6E-08 42.6 7.6 116 62-227 35-156 (164)
101 1x5e_A Thioredoxin domain cont 97.3 0.00058 2.4E-08 43.7 6.7 38 190-227 69-110 (126)
102 1faa_A Thioredoxin F; electron 97.3 0.0016 6.8E-08 40.9 8.9 35 190-225 83-122 (124)
103 1ti3_A Thioredoxin H, PTTRXH1; 97.3 0.0012 5.2E-08 41.6 8.3 34 191-225 72-110 (113)
104 3ed3_A Protein disulfide-isome 97.3 0.00075 3.2E-08 43.0 6.9 29 66-94 36-64 (298)
105 3f8u_A Protein disulfide-isome 97.2 0.0016 6.9E-08 40.8 8.5 36 58-93 14-49 (481)
106 2vlu_A Thioredoxin, thioredoxi 97.2 0.0014 5.9E-08 41.2 8.1 34 192-226 81-119 (122)
107 2f9s_A Thiol-disulfide oxidore 97.2 0.0042 1.7E-07 38.3 10.3 113 60-229 21-139 (151)
108 3hcz_A Possible thiol-disulfid 97.2 0.00094 4E-08 42.4 6.8 36 60-95 26-61 (148)
109 1mek_A Protein disulfide isome 97.2 0.00055 2.3E-08 43.8 5.5 36 191-226 74-116 (120)
110 2vup_A Glutathione peroxidase- 97.2 0.0013 5.4E-08 41.5 7.3 143 58-231 41-189 (190)
111 2pu9_C TRX-F, thioredoxin F-ty 97.2 0.002 8.3E-08 40.3 8.2 34 191-225 71-109 (111)
112 1syr_A Thioredoxin; SGPP, stru 97.1 0.0015 6.3E-08 41.1 7.5 34 191-225 72-110 (112)
113 3kh7_A Thiol:disulfide interch 97.1 0.00097 4.1E-08 42.3 6.4 31 62-92 55-85 (176)
114 3f9u_A Putative exported cytoc 97.1 0.00053 2.2E-08 43.9 4.9 41 191-231 123-170 (172)
115 3f3q_A Thioredoxin-1; His TAG, 97.1 0.0028 1.2E-07 39.4 8.1 34 190-224 69-107 (109)
116 2cvb_A Probable thiol-disulfid 97.0 0.00042 1.8E-08 44.6 3.7 40 58-98 26-65 (188)
117 3dwv_A Glutathione peroxidase- 97.0 0.00021 8.8E-09 46.5 2.2 142 58-230 39-186 (187)
118 3ha9_A Uncharacterized thiored 97.0 0.0034 1.4E-07 38.8 8.4 36 59-94 31-66 (165)
119 1wou_A Thioredoxin -related pr 97.0 0.00089 3.7E-08 42.5 5.1 30 65-94 24-60 (123)
120 2xc2_A Thioredoxinn; oxidoredu 97.0 0.0016 6.8E-08 40.9 6.3 35 191-226 78-117 (117)
121 2oe3_A Thioredoxin-3; electron 97.0 0.0016 6.9E-08 40.8 6.4 33 191-224 76-113 (114)
122 3idv_A Protein disulfide-isome 96.9 0.006 2.5E-07 37.3 9.0 36 189-224 195-234 (241)
123 3hdc_A Thioredoxin family prot 96.9 0.0032 1.4E-07 39.0 7.5 38 58-95 34-71 (158)
124 2ywi_A Hypothetical conserved 96.9 0.0014 6.1E-08 41.2 5.7 35 65-99 46-80 (196)
125 3idv_A Protein disulfide-isome 96.9 0.0079 3.3E-07 36.5 9.4 28 66-93 33-60 (241)
126 3ia1_A THIO-disulfide isomeras 96.9 0.0011 4.7E-08 41.9 5.0 37 190-226 101-143 (154)
127 1x5c_A Protein disulfide-isome 96.9 0.011 4.7E-07 35.6 9.8 36 192-227 73-115 (121)
128 3ewl_A Uncharacterized conserv 96.8 0.0013 5.6E-08 41.4 4.6 38 191-228 102-142 (142)
129 1lu4_A Soluble secreted antige 96.8 0.0038 1.6E-07 38.5 6.8 37 191-227 92-136 (136)
130 3kp8_A Vkorc1/thioredoxin doma 96.7 0.00084 3.5E-08 42.6 3.1 41 191-231 59-99 (106)
131 2dj3_A Protein disulfide-isome 96.7 0.00092 3.8E-08 42.4 3.3 38 191-228 74-119 (133)
132 2f51_A Thioredoxin; electron t 96.5 0.0088 3.7E-07 36.2 7.1 25 66-90 24-48 (118)
133 1wmj_A Thioredoxin H-type; str 96.4 0.00049 2.1E-08 44.2 0.5 35 192-227 83-122 (130)
134 3eur_A Uncharacterized protein 96.4 0.007 3E-07 36.8 6.2 33 58-90 24-56 (142)
135 1hyu_A AHPF, alkyl hydroperoxi 96.4 0.018 7.8E-07 34.2 8.3 155 61-223 15-196 (521)
136 3cmi_A Peroxiredoxin HYR1; thi 96.3 0.002 8.4E-08 40.3 3.1 39 192-230 127-171 (171)
137 3cyn_A Probable glutathione pe 96.3 0.015 6.2E-07 34.8 7.5 48 58-105 40-87 (189)
138 1o73_A Tryparedoxin; electron 96.3 0.019 8.1E-07 34.1 8.0 48 58-106 21-68 (144)
139 3c1r_A Glutaredoxin-1; oxidize 96.2 0.023 9.6E-07 33.6 8.1 38 192-229 76-115 (118)
140 3cxg_A Putative thioredoxin; m 96.2 0.0094 4E-07 36.0 6.1 34 191-225 85-127 (133)
141 2rli_A SCO2 protein homolog, m 96.0 0.016 6.9E-07 34.5 6.5 39 193-231 124-168 (171)
142 3l4n_A Monothiol glutaredoxin- 96.0 0.02 8.5E-07 33.9 6.8 35 193-230 65-104 (127)
143 2v1m_A Glutathione peroxidase; 95.9 0.0064 2.7E-07 37.1 4.0 42 58-99 24-65 (169)
144 2p5q_A Glutathione peroxidase 95.9 0.019 7.9E-07 34.1 6.3 44 58-102 25-68 (170)
145 2dlx_A UBX domain-containing p 95.3 0.11 4.5E-06 29.4 8.4 39 191-229 94-138 (153)
146 2p31_A CL683, glutathione pero 95.2 0.041 1.7E-06 32.0 6.0 41 58-98 42-82 (181)
147 3fk8_A Disulphide isomerase; A 95.1 0.071 3E-06 30.5 6.9 25 65-89 29-53 (133)
148 1oaz_A Thioredoxin 1; immune s 95.0 0.0085 3.6E-07 36.3 2.0 36 191-226 82-122 (123)
149 1ego_A Glutaredoxin; electron 94.9 0.1 4.2E-06 29.5 7.3 31 194-227 54-84 (85)
150 1a8l_A Protein disulfide oxido 93.9 0.32 1.4E-05 26.3 9.1 26 65-90 22-48 (226)
151 2b5e_A Protein disulfide-isome 92.8 0.13 5.3E-06 28.9 4.6 30 64-93 30-59 (504)
152 3ic4_A Glutaredoxin (GRX-1); s 92.8 0.3 1.2E-05 26.6 6.5 30 192-222 61-90 (92)
153 3msz_A Glutaredoxin 1; alpha-b 92.5 0.07 2.9E-06 30.5 2.9 34 193-229 56-89 (89)
154 2djj_A PDI, protein disulfide- 92.4 0.17 7.1E-06 28.1 4.9 33 193-225 76-115 (121)
155 1ilo_A Conserved hypothetical 92.2 0.093 3.9E-06 29.7 3.3 30 193-222 45-76 (77)
156 1qgv_A Spliceosomal protein U5 92.1 0.13 5.7E-06 28.7 4.0 35 60-94 18-52 (142)
157 2ggt_A SCO1 protein homolog, m 92.0 0.21 8.9E-06 27.5 4.9 37 194-230 122-164 (164)
158 3h79_A Thioredoxin-like protei 91.2 0.1 4.4E-06 29.4 2.7 34 191-224 85-125 (127)
159 3nzn_A Glutaredoxin; structura 91.2 0.23 9.8E-06 27.2 4.4 31 192-222 71-101 (103)
160 1wjk_A C330018D20RIK protein; 91.0 0.18 7.5E-06 28.0 3.7 37 191-228 60-97 (100)
161 2hls_A Protein disulfide oxido 90.9 0.46 1.9E-05 25.4 5.7 26 64-89 137-162 (243)
162 3me7_A Putative uncharacterize 90.7 0.44 1.8E-05 25.5 5.4 50 58-107 21-71 (170)
163 2e7p_A Glutaredoxin; thioredox 90.5 0.75 3.2E-05 24.0 6.5 35 192-229 67-106 (116)
164 3evi_A Phosducin-like protein 90.0 0.24 1E-05 27.2 3.6 31 64-94 22-52 (118)
165 2dj0_A Thioredoxin-related tra 89.8 0.16 6.9E-06 28.2 2.7 29 66-94 27-55 (137)
166 2klx_A Glutaredoxin; thioredox 89.8 0.41 1.7E-05 25.7 4.7 33 194-229 51-88 (89)
167 1r7h_A NRDH-redoxin; thioredox 89.2 0.8 3.4E-05 23.8 5.8 29 193-222 45-73 (75)
168 3h8q_A Thioredoxin reductase 3 89.0 0.41 1.7E-05 25.7 4.2 34 193-229 65-103 (114)
169 3gix_A Thioredoxin-like protei 88.8 0.3 1.3E-05 26.5 3.4 31 63-93 21-51 (149)
170 1o8x_A Tryparedoxin, TRYX, TXN 88.7 0.43 1.8E-05 25.6 4.1 46 60-106 23-68 (146)
171 3fz9_A Glutaredoxin; oxidoredu 88.7 1 4.3E-05 23.2 6.0 35 192-229 66-105 (112)
172 1i5g_A Tryparedoxin II; electr 88.4 0.47 2E-05 25.3 4.2 46 60-106 23-68 (144)
173 1h75_A Glutaredoxin-like prote 87.7 0.61 2.6E-05 24.6 4.4 29 192-221 44-72 (81)
174 2ht9_A Glutaredoxin-2; thiored 86.6 0.69 2.9E-05 24.2 4.2 36 192-230 96-136 (146)
175 2khp_A Glutaredoxin; thioredox 86.2 0.54 2.3E-05 24.9 3.4 34 193-229 51-89 (92)
176 1sji_A Calsequestrin 2, calseq 85.8 0.3 1.3E-05 26.5 2.0 22 66-88 29-50 (350)
177 3ctg_A Glutaredoxin-2; reduced 85.5 0.5 2.1E-05 25.1 3.0 34 192-228 88-126 (129)
178 2cq9_A GLRX2 protein, glutared 85.1 0.86 3.6E-05 23.6 4.1 36 192-230 74-114 (130)
179 3kp8_A Vkorc1/thioredoxin doma 85.1 0.36 1.5E-05 26.0 2.1 25 69-93 16-40 (106)
180 2av4_A Thioredoxin-like protei 85.0 0.83 3.5E-05 23.7 3.9 32 63-94 39-70 (160)
181 2fgx_A Putative thioredoxin; N 84.9 0.6 2.5E-05 24.6 3.2 31 191-222 73-106 (107)
182 2axo_A Hypothetical protein AT 84.9 1.9 8E-05 21.5 8.0 33 197-229 113-145 (270)
183 1fov_A Glutaredoxin 3, GRX3; a 84.7 1.6 6.6E-05 22.0 5.2 27 193-222 46-72 (82)
184 2hze_A Glutaredoxin-1; thiored 84.7 0.73 3.1E-05 24.1 3.5 33 194-229 71-108 (114)
185 2dbc_A PDCL2, unnamed protein 84.6 0.73 3.1E-05 24.1 3.5 29 66-94 31-59 (135)
186 1sen_A Thioredoxin-like protei 84.3 0.65 2.7E-05 24.4 3.1 24 66-89 47-70 (164)
187 3ipz_A Monothiol glutaredoxin- 83.8 1.5 6.2E-05 22.2 4.8 36 194-229 69-106 (109)
188 1kte_A Thioltransferase; redox 83.1 1.8 7.5E-05 21.6 5.0 34 193-229 63-101 (105)
189 1a8y_A Calsequestrin; calcium- 83.1 1.6 6.7E-05 21.9 4.7 22 65-87 30-51 (367)
190 2obi_A PHGPX, GPX-4, phospholi 82.4 2.4 0.0001 20.8 6.1 41 58-99 40-80 (183)
191 3gx8_A Monothiol glutaredoxin- 82.3 1.5 6.3E-05 22.1 4.3 36 194-229 70-107 (121)
192 2jad_A Yellow fluorescent prot 82.0 1.6 6.8E-05 21.9 4.4 38 192-229 312-351 (362)
193 3ga4_A Dolichyl-diphosphooligo 81.9 0.75 3.2E-05 24.0 2.7 36 58-94 31-73 (178)
194 2qc7_A ERP31, ERP28, endoplasm 81.8 1.1 4.7E-05 22.9 3.5 23 65-89 22-44 (240)
195 1z6n_A Hypothetical protein PA 80.9 1.4 5.8E-05 22.3 3.7 33 62-94 51-83 (167)
196 2wem_A Glutaredoxin-related pr 78.8 2.6 0.00011 20.6 4.6 34 194-230 72-110 (118)
197 1a0r_P Phosducin, MEKA, PP33; 78.6 1.7 7.3E-05 21.7 3.6 32 63-94 131-162 (245)
198 2trc_P Phosducin, MEKA, PP33; 78.1 1.9 8.2E-05 21.4 3.8 30 65-94 120-149 (217)
199 2wci_A Glutaredoxin-4; redox-a 75.1 4 0.00017 19.4 4.8 34 193-229 85-123 (135)
200 2cx4_A Bacterioferritin comigr 72.6 3.1 0.00013 20.1 3.7 30 65-94 33-63 (164)
201 2gs3_A PHGPX, GPX-4, phospholi 72.4 4.6 0.0002 19.0 6.3 41 58-99 42-82 (185)
202 2k8s_A Thioredoxin; dimer, str 70.8 2 8.3E-05 21.4 2.3 23 71-93 6-28 (80)
203 2x8g_A Thioredoxin glutathione 61.3 5.7 0.00024 18.5 3.1 17 68-84 19-35 (598)
204 1xzo_A BSSCO, hypothetical pro 61.3 7.7 0.00032 17.6 4.0 49 58-106 26-75 (174)
205 2ywn_A Peroxiredoxin-like prot 60.8 7.9 0.00033 17.6 3.9 32 66-97 31-63 (157)
206 1nm3_A Protein HI0572; hybrid, 60.7 7.9 0.00033 17.5 4.2 28 192-222 213-240 (241)
207 1wik_A Thioredoxin-like protei 59.5 2.7 0.00012 20.5 1.2 33 194-229 66-103 (109)
208 1aba_A Glutaredoxin; electron 57.1 5.6 0.00023 18.5 2.5 27 193-222 59-86 (87)
209 2ec4_A FAS-associated factor 1 56.0 9.5 0.0004 17.0 11.8 38 191-228 123-169 (178)
210 2ct6_A SH3 domain-binding glut 53.7 1.8 7.6E-05 21.6 -0.5 27 194-223 68-94 (111)
211 2yzh_A Probable thiol peroxida 52.2 11 0.00046 16.7 3.5 37 58-94 40-77 (171)
212 3i9v_2 NADH-quinone oxidoreduc 51.2 6.6 0.00028 18.1 2.1 86 135-227 27-159 (181)
213 1xvw_A Hypothetical protein RV 50.2 12 0.00049 16.5 3.9 29 66-94 37-66 (160)
214 1u6t_A SH3 domain-binding glut 49.6 4.5 0.00019 19.1 1.0 65 154-222 20-85 (121)
215 1ttz_A Conserved hypothetical 48.7 12 0.0005 16.4 3.1 32 192-224 42-74 (87)
216 3kgk_A Arsenical resistance op 46.6 13 0.00056 16.1 4.3 34 190-223 64-99 (110)
217 2f8a_A Glutathione peroxidase 45.8 14 0.00058 16.0 5.0 46 60-106 42-87 (208)
218 3hvv_A Thiol peroxidase, scave 45.8 14 0.00058 16.0 3.6 36 58-93 37-73 (167)
219 3ktb_A Arsenical resistance op 41.7 16 0.00066 15.6 4.7 33 190-222 67-101 (106)
220 2jsy_A Probable thiol peroxida 41.7 16 0.00067 15.6 3.0 29 66-94 45-74 (167)
221 2e84_A High-molecular-weight c 40.2 9.1 0.00038 17.2 1.4 30 2-31 1-30 (556)
222 1psq_A Probable thiol peroxida 39.6 17 0.00072 15.4 4.2 36 59-94 36-72 (163)
223 2g2q_A Glutaredoxin-2; thiored 37.0 19 0.00079 15.2 2.8 38 66-108 2-39 (124)
224 2elp_A Zinc finger protein 406 30.2 7.4 0.00031 17.7 -0.4 20 75-94 10-29 (37)
225 2a4v_A Peroxiredoxin DOT5; yea 27.6 27 0.0011 14.2 5.4 29 65-94 35-65 (159)
226 3lyk_A Stringent starvation pr 25.6 21 0.00088 14.9 1.3 18 68-85 6-23 (216)
227 3c8f_A Pyruvate formate-lyase 24.6 30 0.0013 13.9 1.9 16 67-82 20-38 (245)
228 1r5a_A Glutathione transferase 24.4 23 0.00096 14.6 1.3 17 68-84 2-18 (218)
229 3lyp_A Stringent starvation pr 24.3 18 0.00075 15.3 0.7 19 68-86 8-26 (215)
230 3ira_A Conserved protein; meth 23.9 31 0.0013 13.8 4.8 25 64-89 39-63 (173)
231 1q98_A Thiol peroxidase, TPX; 23.1 32 0.0014 13.7 2.2 29 66-94 45-73 (165)
232 3gkn_A Bacterioferritin comigr 22.8 33 0.0014 13.6 3.7 34 65-98 35-69 (163)
233 2auv_A Potential NAD-reducing 20.9 13 0.00055 16.2 -0.5 26 198-224 59-84 (85)
234 2k6v_A Putative cytochrome C o 20.8 36 0.0015 13.4 4.9 51 58-108 28-80 (172)
235 1t1v_A SH3BGRL3, SH3 domain-bi 20.0 37 0.0016 13.3 5.5 26 195-223 57-82 (93)
No 1
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis wmel} PDB: 3f4r_A* 3f4t_A*
Probab=100.00 E-value=9.1e-34 Score=232.05 Aligned_cols=175 Identities=33% Similarity=0.608 Sum_probs=151.9
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66784116898888999970588820644334211344320000203799843323430245777666666665321245
Q gi|254780477|r 54 TMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYW 133 (232)
Q Consensus 54 ~~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 133 (232)
..+++++||+||||+|+||+||.||||+.|++++.+.+++.+.+.+++.+++++++.+.....++..+ .+...++++|
T Consensus 28 ~~~~~~~Gn~dA~i~Ivef~Dy~Cp~C~~f~~~v~~~l~~~~~~~~~~~~~~~~~p~~~~s~~aa~~a--~~a~~~~k~~ 105 (226)
T 3f4s_A 28 LPNDKLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLS--HCYEKQEDYF 105 (226)
T ss_dssp CTTCCEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHG--GGCCSHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH--HHHHCCCCHH
T ss_conf 99998367999998999988999873798999999999998502652899846887646699999999--9874014258
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC------
Q ss_conf 58888886543321134-56899876431100006889864059899999999999999861885365799898------
Q gi|254780477|r 134 GFVSLLFNKQDDWINSK-NYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGG------ 206 (232)
Q Consensus 134 ~~~~~~~~~q~~~~~~~-~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG------ 206 (232)
.+++.+|..|..+.... ...+.+..++...|++..++.+|+++....+.+.++...+.+++||+|||||||||
T Consensus 106 ~~~~~Lf~~q~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~gI~gTPtfiIng~~~~~~ 185 (226)
T 3f4s_A 106 NFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSY 185 (226)
T ss_dssp HHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 99999998566430234530578999988700569999999769999999999999999983986589899937775454
Q ss_pred -----EEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf -----996189999999999999999860
Q gi|254780477|r 207 -----NLYLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 207 -----~~~~g~~~~~~~~~~id~ll~~~~ 230 (232)
..+.|+.++++|+++||++|.|+-
T Consensus 186 ~~~n~~~~~G~~~~e~~~~~Id~ll~ka~ 214 (226)
T 3f4s_A 186 IEHNKVKHGGYKELKYFTNVIDKLYGKAI 214 (226)
T ss_dssp CCGGGGEEESCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 56687672288899999999999999867
No 2
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=100.00 E-value=1.4e-33 Score=230.79 Aligned_cols=184 Identities=17% Similarity=0.345 Sum_probs=159.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH-HHHHHHH
Q ss_conf 124587666784116898888999970588820644334211344320000203799843323430245777-6666666
Q gi|254780477|r 47 LLAASPSTMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAV-MLARCAE 125 (232)
Q Consensus 47 ~~~~~~~~~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~ 125 (232)
...++|....++++|+++|||+|+||+||.||||+.|++.+.+++++.+.+.+.+++++++++++......+ .+..+++
T Consensus 11 ~~~~~~~~~~~p~iG~~~A~v~Ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~v~~~~~~~p~~~~~~~~a~~a~~~~~ 90 (202)
T 3gha_A 11 AVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVW 90 (202)
T ss_dssp CCCSCCCCTTSCEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 34579877899743699999899998899987179899989999998741267458874036400010499999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 6532124558888886543321134568998764311-000068898640598999999999999998618853657998
Q gi|254780477|r 126 KRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKF-AGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI 204 (232)
Q Consensus 126 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V 204 (232)
...++++|.+++.+|+.|..+.........+..++.. .|++...+..|+++......+..+.+.+ +.+||+|||||+|
T Consensus 91 ~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~a~~~~gl~~~~~~~~~~~~~~~~~i~~~~~~~-~~~gI~gTPt~iI 169 (202)
T 3gha_A 91 KEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLN-QKMNIQATPTIYV 169 (202)
T ss_dssp HHCGGGHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHH-HHTTCCSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHH-HHHCCEECCEEEE
T ss_conf 871776899999999850023311011445677776530234788887204299999999999999-9839801688999
Q ss_pred CCEEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 989961899999999999999998603
Q gi|254780477|r 205 GGNLYLGDMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 205 nG~~~~g~~~~~~~~~~id~ll~~~~~ 231 (232)
||+++.|..++++|+++||++|+.+-|
T Consensus 170 nG~~~~g~~~~~~l~~~Id~~L~~k~~ 196 (202)
T 3gha_A 170 NDKVIKNFADYDEIKETIEKELKGKLE 196 (202)
T ss_dssp TTEECSCTTCHHHHHHHHHHHHHHC--
T ss_pred CCEEECCCCCHHHHHHHHHHHHHHCHH
T ss_conf 999946999999999999999861300
No 3
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=99.97 E-value=1.3e-31 Score=218.49 Aligned_cols=173 Identities=20% Similarity=0.257 Sum_probs=147.2
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 84116898888999970588820644334211344320000203799843323430-24577766666666532124558
Q gi|254780477|r 57 DVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDS-VSTVAVMLARCAEKRMDGGYWGF 135 (232)
Q Consensus 57 ~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~ 135 (232)
+++.|++|||++|+||+||.||||++|++.+.+.+++.+.+.+++++++++++... .......+..++....+.++|.+
T Consensus 3 ~~~~~~~~ak~~I~~f~D~~Cp~C~~~~~~~~~~l~~~~~d~~~v~~~~~~~~~~~~~s~~aa~a~~~~~~~~~~~~~~~ 82 (186)
T 3bci_A 3 SATTSSKNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDF 82 (186)
T ss_dssp --------CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECCCSCTTHHHHHHHHHHHHHHCGGGHHHH
T ss_pred CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 98889999995999988899873899999899999998511574579986562100136789999999986475779999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHH-----HHHHHHHHHHHHHHCCCCCCCEEEECCEEEC
Q ss_conf 88888654332113456899876431100006889864059899-----9999999999998618853657998989961
Q gi|254780477|r 136 VSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNI-----LDDIKAGKKRASEDFAIDSTPVFFIGGNLYL 210 (232)
Q Consensus 136 ~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~ 210 (232)
++.+|++|..+.......+.+..+++.+|++...+.+|+++... ...+..+... ++.+||+|||||+|||+++.
T Consensus 83 ~~~lf~~~~~~~~~~~~~~~l~~~a~~~gl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~gv~gTPt~iInGk~~~ 161 (186)
T 3bci_A 83 QKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKI-AKDNHIKTTPTAFINGEKVE 161 (186)
T ss_dssp HHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HHHTTCCSSSEEEETTEECS
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH-HHHCCCCCCCEEEECCEEEC
T ss_conf 99998764442146675889999999829999999999857432128999999999999-99859843888989999923
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999860
Q gi|254780477|r 211 GDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 211 g~~~~~~~~~~id~ll~~~~ 230 (232)
|..++++|+++||++|++-.
T Consensus 162 g~~~~~~l~~~id~~lk~~~ 181 (186)
T 3bci_A 162 DPYDYESYEKLLKDKIKLEH 181 (186)
T ss_dssp CTTCHHHHHHHHHC------
T ss_pred CCCCHHHHHHHHHHHHHHHH
T ss_conf 98999999999999998642
No 4
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans DSM12444}
Probab=99.97 E-value=9.8e-31 Score=212.90 Aligned_cols=174 Identities=19% Similarity=0.374 Sum_probs=146.3
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66784116898888999970588820644334211344320000203799843323430245777666666665321245
Q gi|254780477|r 54 TMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYW 133 (232)
Q Consensus 54 ~~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 133 (232)
...++++|+++||++|+||+||.||||++|++++.+.+++.+.+.+...+++++.+.+.......... .+.....++
T Consensus 4 ~~~~~~~G~~~A~v~Ii~f~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 80 (205)
T 3gmf_A 4 ADGHHLLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFVRDPIDMTVALIT---NCVPPSRFF 80 (205)
T ss_dssp CTTEEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHH---HHSCHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH---HHHCCHHHH
T ss_conf 78996115999998999988999862798999999999875134606999834665526778999999---961100499
Q ss_pred HHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 58888886543321-----------------------1345689987643110000688986405989999999999999
Q gi|254780477|r 134 GFVSLLFNKQDDWI-----------------------NSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRA 190 (232)
Q Consensus 134 ~~~~~~~~~q~~~~-----------------------~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 190 (232)
.+++.++..|..+. ........+..++...|++..++..|+++.+....+.++...+
T Consensus 81 ~~~~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~g~~~~~~~~~l~~~~~~~~v~~~~~~a 160 (205)
T 3gmf_A 81 TLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRSTLDRCLSNEALAKKLAAETDEA 160 (205)
T ss_dssp HHHHHHHHTHHHHCHHHHHCCHHHHHTTSSSCHHHHHHHHHHHTTHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 99999998531012210014677777777665555430347889999999882476999999973889999999999999
Q ss_pred HHHCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9861885365799898996189999999999999999860
Q gi|254780477|r 191 SEDFAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 191 ~~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~id~ll~~~~ 230 (232)
.+++||+|||||+|||++++|..++++|+++||.+|.|..
T Consensus 161 ~~~~gi~gTPt~iIng~~v~G~~~~~~l~~~I~~~l~e~~ 200 (205)
T 3gmf_A 161 INQYNVSGTPSFMIDGILLAGTHDWASLRPQILARLNEGH 200 (205)
T ss_dssp HHHHCCCSSSEEEETTEECTTCCSHHHHHHHHHHHHTC--
T ss_pred HHHCCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHCCC
T ss_conf 9980985178899999995088999999999999995788
No 5
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=99.97 E-value=3.6e-29 Score=203.04 Aligned_cols=171 Identities=15% Similarity=0.179 Sum_probs=132.6
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66784116898888999970588820644334211344320000203799843323430245777666666665321245
Q gi|254780477|r 54 TMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYW 133 (232)
Q Consensus 54 ~~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 133 (232)
..+.++.|+++|||+|+||+||.||||+.|++.+.+++++...+ +.++..+++.+......++...+ .....++
T Consensus 14 ~l~~P~~~~~~akvtIvef~dy~Cp~C~~~e~~l~~~~~~~~~~---v~~~~~p~~~~~~~~~~a~~~~a---~~~~~~~ 87 (195)
T 3hd5_A 14 NINPPMPSDTPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQD---VVLKQVPIAFNAGMKPLQQLYYT---LQALERP 87 (195)
T ss_dssp ECSSCCCCSSTTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECCSSGGGHHHHHHHHH---HHHTTCT
T ss_pred ECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC---EEEEEEECCCCHHHHHHHHHHHH---HHHCHHH
T ss_conf 87899878999976999988889863798979999999737787---58999743540549999999999---9964157
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCC-
Q ss_conf 5888888654332113456899876431100006889864059899999999999999861885365799898996189-
Q gi|254780477|r 134 GFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGD- 212 (232)
Q Consensus 134 ~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g~- 212 (232)
.++..+|.............+.+..++...|++..++..|+++......|.++...+ +++||+|||||+|||+++.+.
T Consensus 88 ~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~gid~~~~~~~~~s~~~~~~v~~~~~~~-~~~gi~gTPtfiVnGky~~~~~ 166 (195)
T 3hd5_A 88 DLHPKVFTAIHTERKRLFDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRASQLA-EAAHIDGTPAFAVGGRYMTSPV 166 (195)
T ss_dssp THHHHHHHHHHTSCCCCCSHHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHH-HHTTCCSSSEEEETTTEEECTT
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHHCCCCCCEEEECCEEECCCC
T ss_conf 889999999998523634299999999981999999999972966789999999999-9809843478999999963755
Q ss_pred ---CCHHHHHHHHHHHHHHHHC
Q ss_conf ---9999999999999998603
Q gi|254780477|r 213 ---MSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 213 ---~~~~~~~~~id~ll~~~~~ 231 (232)
.+++++.++||+||+|+||
T Consensus 167 ~~~~~~~~~~~~id~ll~k~~~ 188 (195)
T 3hd5_A 167 LAGNDYAGALKVVDQLIVQSRE 188 (195)
T ss_dssp TTTGGGTTHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHC
T ss_conf 6764799999999999999967
No 6
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, periplasm, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1}
Probab=99.96 E-value=3.6e-29 Score=202.98 Aligned_cols=171 Identities=14% Similarity=0.155 Sum_probs=136.5
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67841168988889999705888206443342113443200002037998433234302457776666666653212455
Q gi|254780477|r 55 MKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWG 134 (232)
Q Consensus 55 ~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 134 (232)
...++.|+++|||+|+||+||.||||++|++.+.+++++++.+.......+. ............ ........++.
T Consensus 15 ~~~p~~~~~~a~v~ivEf~dy~Cp~C~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~a~~~~~~~~ 89 (192)
T 3h93_A 15 LSSPVPVSQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPAL---FGGIWNVHGQMF--LTLESMGVEHD 89 (192)
T ss_dssp CSSCCCCSSTTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC---CSTHHHHHHHHH--HHHHHHTCCHH
T ss_pred CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCC---CCCCCHHHHHHH--HHHHHHCCHHH
T ss_conf 7788778999986999988889852698989999987633555426886676---664457999999--99998373577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEC---C
Q ss_conf 8888886543321134568998764311000068898640598999999999999998618853657998989961---8
Q gi|254780477|r 135 FVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYL---G 211 (232)
Q Consensus 135 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~---g 211 (232)
++..+|..+..+.........+..++...|++...+..|+++....+.|..+...+ +.+||+|||||+|||+++. +
T Consensus 90 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~i~~~~~~a-~~~gv~gTPtfiInGk~~~~~~~ 168 (192)
T 3h93_A 90 VHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLA-MAYQVTGVPTMVVNGKYRFDIGS 168 (192)
T ss_dssp HHHHHHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHH-HHHTCCSSSEEEETTTEEEEHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCEEEECCEEEECCCC
T ss_conf 99999999987630421067899999872888999999873199999999999999-99298627889998988607756
Q ss_pred CCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999998603
Q gi|254780477|r 212 DMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 212 ~~~~~~~~~~id~ll~~~~~ 231 (232)
..++++|.++||+||+|.++
T Consensus 169 ~~~~e~l~~~i~~L~~k~~~ 188 (192)
T 3h93_A 169 AGGPEETLKLADYLIEKERA 188 (192)
T ss_dssp HTSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999999998
No 7
>3gyk_A 27KDA outer membrane protein; APC61738.2, thioredoxin-like, oxidoreductase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Silicibacter pomeroyi dss-3}
Probab=99.96 E-value=1.3e-28 Score=199.45 Aligned_cols=164 Identities=16% Similarity=0.300 Sum_probs=136.0
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67841168988889999705888206443342113443200002037998433234302457776666666653212455
Q gi|254780477|r 55 MKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWG 134 (232)
Q Consensus 55 ~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 134 (232)
...+++|+++||++|+||+||.||||+++++.+.+.+++. +++.++++++|........ +.....+...+..++.
T Consensus 12 ~~~p~~G~~~A~~~i~~f~D~~Cp~C~~~~~~~~~~~~~~----~~v~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDAD----PNVRLVYREWPILGEGSDF-AARAALAARQQGKYEA 86 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHC----TTEEEEEEECCCSCHHHHH-HHHHHHHGGGGTCHHH
T ss_pred CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC----CCEEEEEEECCCCCHHHHH-HHHHHHHHHHCCCHHH
T ss_conf 9998547999998999988999864798999999988655----9769999736432121399-9999998740320367
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCCC
Q ss_conf 88888865433211345689987643110000688986405989999999999999986188536579989899618999
Q gi|254780477|r 135 FVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDMS 214 (232)
Q Consensus 135 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g~~~ 214 (232)
+++.++..+.. .+.+.+..+....+++..++..|+++......|..+.+.+ +.+||+|||||||||+++.|..+
T Consensus 87 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~v~~~~~~a-~~~gi~gTPt~~VnG~~v~g~~~ 160 (175)
T 3gyk_A 87 FHWALMGMSGK-----ANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALA-QKLGFNGTPSFVVEDALVPGFVE 160 (175)
T ss_dssp HHHHHHTCSSC-----CSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHH-HHHTCCSSSEEEETTEEECSCCC
T ss_pred HHHHHHHHCCC-----HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEECCCCC
T ss_conf 99999852021-----0256799999984999999999863488999999999999-98598328889999999429999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999986
Q gi|254780477|r 215 EGVFSKIIDSMIQDS 229 (232)
Q Consensus 215 ~~~~~~~id~ll~~~ 229 (232)
+++|+++||+.++++
T Consensus 161 ~~~l~~~I~~~~~~~ 175 (175)
T 3gyk_A 161 QSQLQDAVDRARKAA 175 (175)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999998439
No 8
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=99.96 E-value=4.2e-28 Score=196.29 Aligned_cols=171 Identities=15% Similarity=0.107 Sum_probs=122.3
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41168988889999705888206443342113443200002037998433234302457776666666653212455888
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVS 137 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 137 (232)
...|++++||+|+||+||.||||++|++.+.++++..... ..+..++.............+............++....
T Consensus 18 ~~~~~~~~kv~IvEf~dy~Cp~C~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 96 (193)
T 2rem_A 18 RPFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKD-VRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFE 96 (193)
T ss_dssp CCSSCCTTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-EEEEEEECCCSTTHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 8889999985899988888871798979899998856665-047888325684428999999999994750033489999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCCCHHH
Q ss_conf 88865433211345689987643110000688986405989999999999999986188536579989899618999999
Q gi|254780477|r 138 LLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDMSEGV 217 (232)
Q Consensus 138 ~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g~~~~~~ 217 (232)
.++..+.. .......+.+..++...|++..++..|+++....+.|.++...+ +.+||+|||||||||+++.+..++++
T Consensus 97 ~~~~~~~~-~~~~~~~~~i~~~a~~~g~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~gV~gTPT~iInGk~~v~~~~~~~ 174 (193)
T 2rem_A 97 AIHEKGSV-PIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYA-LKVRPVGTPTIVVNGRYMVTGHDFED 174 (193)
T ss_dssp HHHTTCCS-CSTTCCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHH-HHHCCSSSSEEEETTTEEECCSSHHH
T ss_pred HHHHHHHH-CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEECCCCCHHH
T ss_conf 99987541-03432189999999983850899999974799999999999999-98099726779999999658999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999998603
Q gi|254780477|r 218 FSKIIDSMIQDSTR 231 (232)
Q Consensus 218 ~~~~id~ll~~~~~ 231 (232)
+.++|+.||++.|.
T Consensus 175 ~~~~i~~li~~~r~ 188 (193)
T 2rem_A 175 TLRITDYLVSRERA 188 (193)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 9
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=99.96 E-value=2.8e-27 Score=191.04 Aligned_cols=172 Identities=14% Similarity=0.066 Sum_probs=128.1
Q ss_pred CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78411689888899997058882064433421134432000020379984332343024577766666666532124558
Q gi|254780477|r 56 KDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGF 135 (232)
Q Consensus 56 ~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 135 (232)
..++.|++++||+|+||+||.||||++||+.+.++++++..+. .+.+++..++. ......+.....+.......+..
T Consensus 15 ~~p~~~~~~a~v~Ivef~dy~Cp~C~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 91 (193)
T 3hz8_A 15 ANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDM-YLRTEHVVWQK--EMLTLARLAAAVDMAAADSKDVA 91 (193)
T ss_dssp SSCCCCSSTTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTE-EEEEEECCCSG--GGHHHHHHHHHHHHHTGGGHHHH
T ss_pred CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC-EEEEECCCCCC--CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8887689999848999888998516878577788998740033-14686666676--73799999999999875537999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCCC
Q ss_conf 8888865433211345-689987643110000688986405989999999999999986188536579989899618999
Q gi|254780477|r 136 VSLLFNKQDDWINSKN-YRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDMS 214 (232)
Q Consensus 136 ~~~~~~~q~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g~~~ 214 (232)
+..++..+........ .......++...|++..++..|+++......+..+.+.+ +++||+|||||||||+++.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~s~~~~~~v~~~~~~~-~~~gI~gTPt~iInGky~v~~~~ 170 (193)
T 3hz8_A 92 NSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELT-ETFQIDGVPTVIVGGKYKVEFAD 170 (193)
T ss_dssp HHHHHHHHHTSCCCTTSHHHHHHHHHHCTTTTHHHHHHHHHSHHHHHHHHHHHHHH-HHTTCCSSSEEEETTTEEECCSS
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEECCCCC
T ss_conf 99999998755104354889999999974998999999860579999999999999-98498608989999999658888
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999998603
Q gi|254780477|r 215 EGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 215 ~~~~~~~id~ll~~~~~ 231 (232)
++.+.++||.|+++.++
T Consensus 171 ~~~~~~~id~li~k~~~ 187 (193)
T 3hz8_A 171 WESGMNTIDLLADKVRE 187 (193)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999
No 10
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=99.95 E-value=3.2e-26 Score=184.38 Aligned_cols=173 Identities=13% Similarity=0.124 Sum_probs=119.1
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66784116898888999970588820644334211344320000203799843323430245777666666665321245
Q gi|254780477|r 54 TMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYW 133 (232)
Q Consensus 54 ~~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 133 (232)
....++.|+++|||+|+||+||.||||++||+.+.++++++..+.. +..++.............++............+
T Consensus 11 ~~~~p~~~~~~a~v~Vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (195)
T 2znm_A 11 VLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAY-LRTEHVVWQPEMLGLARMAAAVNLSGLKYQANP 89 (195)
T ss_dssp ECSSCCCCSSSSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEE-EEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHH
T ss_pred ECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE-EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7889876899998599999899984258886889998752566336-898657566550799999999998520222237
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEE-ECCC
Q ss_conf 588888865433211345689987643110000688986405989999999999999986188536579989899-6189
Q gi|254780477|r 134 GFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNL-YLGD 212 (232)
Q Consensus 134 ~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~-~~g~ 212 (232)
.....++..+.. .......+..++...|++..++..|+++......+.++...+ +.+||+|||||||||++ +.+.
T Consensus 90 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~i~~~~~~a-~~~gI~gTPT~iInGk~~v~~~ 165 (195)
T 2znm_A 90 AVFKAVYEQKIR---LENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLT-EQYRIDSTPTVIVGGKYRVIFN 165 (195)
T ss_dssp HHHHHHHHCSSC---TTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHH-HHTTCCSSSEEEETTTEEECCC
T ss_pred HHHHHHHHHHHC---CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH-HHHCCCCCCEEEECCEEEECCC
T ss_conf 999999988641---000789988667660889999998860801224799999999-9819984888999899984388
Q ss_pred CCHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999998603
Q gi|254780477|r 213 MSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 213 ~~~~~~~~~id~ll~~~~~ 231 (232)
.+.+.+.++|+.+|++.++
T Consensus 166 ~~~~~~~~~i~~li~k~~~ 184 (195)
T 2znm_A 166 NGFDGGVHTIKELVAKVRE 184 (195)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999
No 11
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis V583} SCOP: c.47.1.13
Probab=99.94 E-value=1.1e-26 Score=187.22 Aligned_cols=164 Identities=22% Similarity=0.344 Sum_probs=123.2
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHH-HHHHHHH
Q ss_conf 458766678411689888899997058882064433421134432000020379984332343024577766-6666665
Q gi|254780477|r 49 AASPSTMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVML-ARCAEKR 127 (232)
Q Consensus 49 ~~~~~~~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~~~ 127 (232)
........++++|+++||++|+||+||.||||++||+++.++++++ .+.+.+.+++++++.+......+.. ..+....
T Consensus 11 ~~~~~~~~~~~~G~~~a~~~Ivef~D~~Cp~C~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 89 (175)
T 1z6m_A 11 ATKVNTETGLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQS-VKSGKVERIIKLFDKEKESLQRGNVMHHYIDYS 89 (175)
T ss_dssp GGGCCSSSSEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHH-HHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTT
T ss_pred HHHCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 2105788886646999998999998998761799999999887764-036526887325777721089999999999961
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCE
Q ss_conf 32124558888886543321134568998764311000068898640598999999999999998618853657998989
Q gi|254780477|r 128 MDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGN 207 (232)
Q Consensus 128 ~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~ 207 (232)
.+..+|.+++.+|..|..+.+.. +..++...+. ..|+.+......+.+....+ +++||+|||||+|||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~gI~gTPt~~Ing~ 158 (175)
T 1z6m_A 90 APEQALSALHKMFATQDEWGNLT-----LEEVATYAEK-----NLGLKEQKDATLVSAVIAEA-NAAHIQFVPTIIIGEY 158 (175)
T ss_dssp CHHHHHHHHHHHHHTHHHHTTSC-----HHHHHHHHHH-----TSCCCCCCCHHHHHHHHHHH-HHHTCCSSCEEEETTE
T ss_pred CHHHHHHHHHHHHHHCCCCCHHH-----HHHHHHHHHH-----CCCHHHHHHHHHHHHHHHHH-HHCCCCCCCEEEECCE
T ss_conf 87779999999997142001557-----9999999825-----40101778898999999999-9859844898989999
Q ss_pred EECCCCCHHHHHHHHHH
Q ss_conf 96189999999999999
Q gi|254780477|r 208 LYLGDMSEGVFSKIIDS 224 (232)
Q Consensus 208 ~~~g~~~~~~~~~~id~ 224 (232)
++.|..+.++|+.+||+
T Consensus 159 ~~~g~~~~~~l~~~i~k 175 (175)
T 1z6m_A 159 IFDESVTEEELRGYIEK 175 (175)
T ss_dssp EECTTCCHHHHHHHHTC
T ss_pred ECCCCCCHHHHHHHHCC
T ss_conf 82498999999999749
No 12
>1bed_A DSBA oxidoreductase; TCPG, protein disulfide isomerase, disulfide oxidoreductase; 2.00A {Vibrio cholerae} SCOP: c.47.1.13 PDB: 2ijy_A
Probab=99.94 E-value=6e-26 Score=182.65 Aligned_cols=167 Identities=13% Similarity=0.127 Sum_probs=125.5
Q ss_pred CCC-CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 116-8988889999705888206443342113443200002037998433234302457776666666653212455888
Q gi|254780477|r 59 SIG-QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVS 137 (232)
Q Consensus 59 ~~G-~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 137 (232)
+++ +.+++++|+||+||.||||++|++.+.++++++.. .+.+..++.++.. ......+....+........+.+..
T Consensus 11 v~~~p~~~~~~Vief~d~~CP~C~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (181)
T 1bed_A 11 VLKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE-GAKFQKNHVSFMG--GNMGQAMSKAYATMIALEVEDKMVP 87 (181)
T ss_dssp ECSSCCCSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TCEEEEEECSSSS--GGGHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC-CEEEEEEECCCCC--CCHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 898888999889999889980528787776778885566-4279999625665--3206999999999998274578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECC---CCC
Q ss_conf 88865433211345689987643110000688986405989999999999999986188536579989899618---999
Q gi|254780477|r 138 LLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLG---DMS 214 (232)
Q Consensus 138 ~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g---~~~ 214 (232)
.++..+............+..++.+.|++...+..|+++....+.|.++...+ +++||+|||||+|||+++.+ ..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~a~~~gld~~~~~~~~~~~~~~~~v~~~~~~~-~~~gI~gTPt~iVnGk~~~~~~~~~~ 166 (181)
T 1bed_A 88 VMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVRRFDKQF-QDSGLTGVPAVVVNNRYLVQGQSVKS 166 (181)
T ss_dssp HHHHHHTTSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHH-HHHTCCSSSEEEETTTEEECGGGCCS
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEEECCCCCCC
T ss_conf 99999987512300489999888764998899999964999999999999999-97198617889999989737878889
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999986
Q gi|254780477|r 215 EGVFSKIIDSMIQDS 229 (232)
Q Consensus 215 ~~~~~~~id~ll~~~ 229 (232)
+++|.++|+.|++++
T Consensus 167 ~~~~~~~i~~L~~~~ 181 (181)
T 1bed_A 167 LDEYFDLVNYLLTLK 181 (181)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999999675
No 13
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=99.94 E-value=6.6e-26 Score=182.37 Aligned_cols=166 Identities=14% Similarity=0.239 Sum_probs=128.3
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH-------------HHH
Q ss_conf 8988889999705888206443342113443200002037998433234302457776666666-------------653
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAE-------------KRM 128 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-------------~~~ 128 (232)
.++||++|+||+||.||||+.|++.+.+.+++.+.+...+.+++..++.+.......+...... ...
T Consensus 14 ~~~a~~~ivef~dy~CP~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (195)
T 3c7m_A 14 IPNADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLETKGEYGKQASEVFAVLINKDKAAGISLFDANSQF 93 (195)
T ss_dssp CSSCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECTTSSTTHHHHHHHHHHHHHHHHHTTCCTTSTTCHH
T ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999479999888885358888988888887356661499974666762468999999999998999999999998777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEE
Q ss_conf 21245588888865433211345689987643110000688986405989999999999999986188536579989899
Q gi|254780477|r 129 DGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNL 208 (232)
Q Consensus 129 ~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~ 208 (232)
...++......+..+..+.........+..++...|++..++..|+++......+...... .+++||+|||||+|||++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~s~~~~~~v~~~~~~-~~~~gv~gTPt~~InGk~ 172 (195)
T 3c7m_A 94 KKAKFAYYAAYHDKKERWSDGKDPAAFIKTGLDAAGMSQADFEAALKEPAVQETLEKWKAS-YDVAKIQGVPAYVVNGKY 172 (195)
T ss_dssp HHHHHHHHHHHHTSCCCTTTTTCHHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHGGGH-HHHHHHHCSSEEEETTTE
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH-HHHCCCCCCCEEEECCEE
T ss_conf 8779999999998630234311257899988774178899988774288899999999999-997598318889998999
Q ss_pred E---CCCCCHHHHHHHHHHHHHH
Q ss_conf 6---1899999999999999998
Q gi|254780477|r 209 Y---LGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 209 ~---~g~~~~~~~~~~id~ll~~ 228 (232)
+ .|..++++|.++|++||+|
T Consensus 173 ~v~~~~~~~~d~l~~~i~~ll~k 195 (195)
T 3c7m_A 173 LIYTKSIKSIDAMADLIRELASK 195 (195)
T ss_dssp EECGGGCCCHHHHHHHHHHHHTC
T ss_pred EECCCCCCCHHHHHHHHHHHHCC
T ss_conf 71688889999999999999768
No 14
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio fischeri ES114}
Probab=99.93 E-value=1.5e-26 Score=186.48 Aligned_cols=165 Identities=13% Similarity=0.145 Sum_probs=124.7
Q ss_pred CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11689888899997058882064433421134432000020379984332343024577766666666532124558888
Q gi|254780477|r 59 SIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSL 138 (232)
Q Consensus 59 ~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 138 (232)
..|++++||+|+||+||.||||++|++.+.+++++++.+. .+.+.+.+..... ...++...........++.+++.
T Consensus 16 ~~~~~d~~v~ivEf~dy~Cp~C~~~~~~l~~~~k~~~~~~---~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~ 91 (185)
T 3feu_A 16 TSLENDGMAPVTEVFALSCGHCRNMENFLPVISQEAGTDI---GKMHITFNQSAHI-ASMFYYAAEMQVDGAPDHAFMED 91 (185)
T ss_dssp SCCTTSCCCSEEEEECTTCHHHHHHGGGHHHHHHHHTSCC---EEEECCSSSHHHH-HHHHHHHHHTTSSSSCCHHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC---CEEEEECCCCCCC-HHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 8888999848999972788050536777688998556554---3267752665321-89999999999862506899999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEC---CCC
Q ss_conf 88654332113--4568998764311000068898640598999999999999998618853657998989961---899
Q gi|254780477|r 139 LFNKQDDWINS--KNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYL---GDM 213 (232)
Q Consensus 139 ~~~~q~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~---g~~ 213 (232)
+|..+...... ......+..++...|++...+..|+.+......+.++...+ +.+||+|||||+|||+++. +..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~gI~gTPt~vInGk~~v~~~~~~ 170 (185)
T 3feu_A 92 LFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLS-EKSGISSVPTFVVNGKYNVLIGGHD 170 (185)
T ss_dssp HHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHH-HHHTCCSSSEEEETTTEEECGGGCS
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCEEEECCEEEECCCCCC
T ss_conf 999988764212320016899999873776899999976077777999999999-9817888858999798973588877
Q ss_pred CHHHHHHHHHHHHHH
Q ss_conf 999999999999998
Q gi|254780477|r 214 SEGVFSKIIDSMIQD 228 (232)
Q Consensus 214 ~~~~~~~~id~ll~~ 228 (232)
+++.+.++||.||+|
T Consensus 171 ~~~~l~~~i~~Ll~K 185 (185)
T 3feu_A 171 DPKQIADTIRYLLEK 185 (185)
T ss_dssp SHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHCC
T ss_conf 999999999999749
No 15
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, plasmid, oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp}
Probab=99.93 E-value=3.5e-25 Score=177.78 Aligned_cols=163 Identities=14% Similarity=0.189 Sum_probs=121.7
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88889999705888206443342113443200002037998433234302457776666666653212455888888654
Q gi|254780477|r 64 DAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQ 143 (232)
Q Consensus 64 ~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q 143 (232)
+|| +|+||+||.||||++||+.+.+..+..........+++++++.........+. ..+.......++.++..+|..+
T Consensus 14 ~ap-~vvEf~dy~CP~C~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~a~~~~~~~~~~~~~~~f~~~ 91 (189)
T 3l9v_A 14 DAP-AVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLLGPLGHELTR-AWALAMVMKETDVIEKAFFTAG 91 (189)
T ss_dssp TCC-SEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSSSTTHHHHHH-HHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCC-EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998-89999888781507586651237789985588718999866777713699999-9999998411677999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEC-----CCCCHH--
Q ss_conf 3321134568998764311000068898640598999999999999998618853657998989961-----899999--
Q gi|254780477|r 144 DDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYL-----GDMSEG-- 216 (232)
Q Consensus 144 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~-----g~~~~~-- 216 (232)
............+..++...|++..++..|+++......|.++.+.+ +.+||+|||||+||||++. +..+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~gld~~~~~~~~~s~~~~~~v~~~~~~a-~~~gI~gTPt~~INGky~i~~~~~~~~~~~~~ 170 (189)
T 3l9v_A 92 MVEKRLHSPDDVRRVFMSATGISRGEYDRSIKSPAVNDMVALQERLF-KEYGVRGTPSVYVRGRYHINNAAFGAFSVENF 170 (189)
T ss_dssp TTTCCCCSHHHHHHHHHHHHCCCHHHHHHHTTSHHHHHHHHHHHHHH-HHTTCCSSSEEEETTTEEECGGGCCCSSHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEEECCCCCCCCCHHHH
T ss_conf 88621343067899988864998899998852899999999999999-98499635679998998746533566578999
Q ss_pred --HHHHHHHHHHHHH
Q ss_conf --9999999999986
Q gi|254780477|r 217 --VFSKIIDSMIQDS 229 (232)
Q Consensus 217 --~~~~~id~ll~~~ 229 (232)
.+..+|+.||+|+
T Consensus 171 ~~~~~~~v~~ll~k~ 185 (189)
T 3l9v_A 171 RSRYAAVVRKLLAGN 185 (189)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999998359
No 16
>3l9s_A Thiol:disulfide interchange protein DSBA; thioredoxin-fold, thiol-disulfide oxidoreductase, disulfide bond, periplasm; 1.58A {Salmonella enterica subsp} PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=99.92 E-value=1.5e-24 Score=173.76 Aligned_cols=167 Identities=15% Similarity=0.200 Sum_probs=111.6
Q ss_pred CCCCCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHH--HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 411689-88889999705888206443342113443--200002037998433234302457776666666653212455
Q gi|254780477|r 58 VSIGQK-DAPVTMVEYASMTCFHCAEFHNKTFKYLE--DKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWG 134 (232)
Q Consensus 58 ~~~G~~-~A~v~ivef~D~~Cp~C~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 134 (232)
.++++| .++++|+||+||.||||++||+.+.+..+ +...+...+..++..++.........+ .+..........
T Consensus 13 ~~~~~p~~~~~~vvEf~dy~Cp~C~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a---~~~~~~~~~~~~ 89 (191)
T 3l9s_A 13 ITLDKPVAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFLGPLGKELTQA---WAVAMALGVEDK 89 (191)
T ss_dssp EECSSCCCSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECSSSSTTHHHHHHH---HHHHHHHTCHHH
T ss_pred EECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHH---HHHHHHCCCHHH
T ss_conf 78889999996799998888840588978877666677637886699998764577058999999---999998152477
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCC--
Q ss_conf 888888654332113456899876431100006889864059899999999999999861885365799898996189--
Q gi|254780477|r 135 FVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGD-- 212 (232)
Q Consensus 135 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g~-- 212 (232)
.....+..+.. .........+..++...|++...+..|+++......|.++...+ +++||+|||||+||||++.+.
T Consensus 90 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~v~~~~~~a-~~~gi~gTPt~iInGky~v~~~~ 167 (191)
T 3l9s_A 90 VTVPLFEAVQK-TQTVQSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAA-ADLQLQGVPAMFVNGKYQINPQG 167 (191)
T ss_dssp HHHHHHHHHHT-SCCCSSHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHH-HHTTCCSSSEEEETTTEEECGGG
T ss_pred HHHHHHHHHHH-HCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEEECCCC
T ss_conf 89999888774-20344377899887652389999999970988999999999999-97099747879998999846765
Q ss_pred ---C----CHHHHHHHHHHHHHHH
Q ss_conf ---9----9999999999999986
Q gi|254780477|r 213 ---M----SEGVFSKIIDSMIQDS 229 (232)
Q Consensus 213 ---~----~~~~~~~~id~ll~~~ 229 (232)
. ..+++..+|+.||+|+
T Consensus 168 ~~~~~~~~~~~~~~~~i~~L~~k~ 191 (191)
T 3l9s_A 168 MDTSSMDVFVQQYADTVKYLVDKK 191 (191)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 552357789999999999998179
No 17
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural genomics, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=99.90 E-value=9.9e-24 Score=168.62 Aligned_cols=159 Identities=14% Similarity=0.109 Sum_probs=124.0
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf 98888999970588820644334211344320000203799843323430245777666--6666653212455888888
Q gi|254780477|r 63 KDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLA--RCAEKRMDGGYWGFVSLLF 140 (232)
Q Consensus 63 ~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~~~~~~~~~~~~~~~ 140 (232)
.+||++|++|+||.||||+++++.+.+.+++.+.+.+.+.+++++++.+.......... ........++++.+++.+|
T Consensus 12 ~~ap~~I~vf~D~~CP~C~~~~~~~~~~~~~~~~d~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQSQPWHMFSGVIVRCILAAATLEGGKESAKAVMTAVA 91 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECCCTTSTTHHHHHHHHHHHTTSTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998999988999876899999999999985566557998864057763148999999999998300417999999998
Q ss_pred HHHHHHHHHH------HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCC-
Q ss_conf 6543321134------568998764311000068898640598999999999999998618853657998989961899-
Q gi|254780477|r 141 NKQDDWINSK------NYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDM- 213 (232)
Q Consensus 141 ~~q~~~~~~~------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g~~- 213 (232)
..+..+.... .....+..++...|++..++..|+++....+.+..+.+.+ +.+||+|||||+|||+.+.|..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gld~~~~~~~~~~~~~~~~v~~~~~~a-~~~Gv~gtPt~~VnG~~~~~~~s 170 (182)
T 3gn3_A 92 SHREEFEFEHHAGGPNLDATPNDIIARIERYSGLALAEAFANPELEHAVKWHTKYA-RQNGIHVSPTFMINGLVQPGMSS 170 (182)
T ss_dssp HTGGGGSCBTTTBSGGGGCCHHHHHHHHHHHHTCCCHHHHHCGGGHHHHHHHHHHH-HHHTCCSSSEEEETTEECTTCCT
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEECCCCC
T ss_conf 73000001000022234678999998870877899999854899999999999999-98498538879899999459998
Q ss_pred --CHHHHHHHH
Q ss_conf --999999999
Q gi|254780477|r 214 --SEGVFSKII 222 (232)
Q Consensus 214 --~~~~~~~~i 222 (232)
+.++|.+.|
T Consensus 171 ~~~~~~wi~~i 181 (182)
T 3gn3_A 171 GDPVSKWVSDI 181 (182)
T ss_dssp TSCHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 06799999974
No 18
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=99.81 E-value=1.1e-19 Score=143.07 Aligned_cols=143 Identities=15% Similarity=0.185 Sum_probs=96.5
Q ss_pred CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78411689888899997058882064433421134432000020379984332343024577766666666532124558
Q gi|254780477|r 56 KDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGF 135 (232)
Q Consensus 56 ~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 135 (232)
..++.|+++||++|++|+||.||||+++++++.++++. +.+++.+.+++.....+ ..++....|..++.+.|..
T Consensus 88 ~~i~~G~~~a~~~I~vF~D~~CPyC~~~~~~l~~~~~~-----~~v~v~~~~~~~~~~~S-~~~a~~i~ca~d~~ka~~~ 161 (241)
T 1v58_A 88 HWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS-----GKVQLRTLLVGVIKPES-PATAAAILASKDPAKTWQQ 161 (241)
T ss_dssp CCEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT-----TSEEEEEEECCCSSTTH-HHHHHHHHHSSSHHHHHHH
T ss_pred CCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEEECCCCCHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 65686699999899999899985189999999999860-----88699999677777668-9999999960679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CC--EEEC
Q ss_conf 888886543321134568998764311000068898640598999999999999998618853657998---98--9961
Q gi|254780477|r 136 VSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GG--NLYL 210 (232)
Q Consensus 136 ~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG--~~~~ 210 (232)
+...+. .......|..+.+....|..+...+ +++||+||||+|+ || +.+.
T Consensus 162 ~~~~~~------------------------~~~~~~~~~~~~~~~~~I~~n~~l~-~~lGi~GTPtiv~~~~~G~~~~i~ 216 (241)
T 1v58_A 162 YEASGG------------------------KLKLNVPANVSTEQMKVLSDNEKLM-DDLGANVTPAIYYMSKENTLQQAV 216 (241)
T ss_dssp HHHTTT------------------------CCCCCCCSSCCHHHHHHHHHHHHHH-HHHTCCSSCEEEEEETTTEEEEEE
T ss_pred HHHHCC------------------------CCCCCCCCCCCHHHHHHHHHHHHHH-HHCCCCCCCEEEEECCCCCEEEEC
T ss_conf 987164------------------------5343331118988999999999999-981997588799986999888842
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999986
Q gi|254780477|r 211 GDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 211 g~~~~~~~~~~id~ll~~~ 229 (232)
|..+.++|++++...|+.-
T Consensus 217 G~~~~~~L~~~lg~~l~~~ 235 (241)
T 1v58_A 217 GLPDQKTLNIIMGNKLQHH 235 (241)
T ss_dssp SSCCHHHHHHHTTC-----
T ss_pred CCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999999886430
No 19
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.80 E-value=1.1e-19 Score=142.98 Aligned_cols=138 Identities=12% Similarity=0.188 Sum_probs=86.6
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 67841168988889999705888206443342113443200002037998433234302457776666-66665321245
Q gi|254780477|r 55 MKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLAR-CAEKRMDGGYW 133 (232)
Q Consensus 55 ~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~~~ 133 (232)
...++.|+++++.+|++|+||.||||+++++++.++..+. +.++++.+|....+........ +.+.......+
T Consensus 76 ~~~~~~g~~~~k~~I~vFtDp~CpyCrk~~~~l~~~~~~~------~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (216)
T 1eej_A 76 KEMIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNALG------ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAF 149 (216)
T ss_dssp GGSEEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHTT------EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHH
T ss_pred HHCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC------CEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHH
T ss_conf 6332324898887999998999876898999999874237------3699998267763257799999999865315556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCEEECCC
Q ss_conf 58888886543321134568998764311000068898640598999999999999998618853657998-98996189
Q gi|254780477|r 134 GFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI-GGNLYLGD 212 (232)
Q Consensus 134 ~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V-nG~~~~g~ 212 (232)
. ..+.... ... ..| ...+.++... ++.+||+||||||+ ||+.+.|.
T Consensus 150 ~---~~~~~~~--------------------~~~---~~~------~~~i~~~~~l-a~~lGi~GTPt~i~~dG~~i~G~ 196 (216)
T 1eej_A 150 D---DVMAGKS--------------------VAP---ASC------DVDIADHYAL-GVQLGVSGTPAVVLSNGTLVPGY 196 (216)
T ss_dssp H---HHHTTCC--------------------CCC---CCC------SCCHHHHHHH-HHHHTCCSSSEEECTTSCEEESC
T ss_pred H---HHHHCCC--------------------CCH---HHH------HHHHHHHHHH-HHHHCCCCCCEEEECCCEEECCC
T ss_conf 7---8873566--------------------422---233------0179999999-99839974887997199284598
Q ss_pred CCHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999998603
Q gi|254780477|r 213 MSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 213 ~~~~~~~~~id~ll~~~~~ 231 (232)
.++++|.++|++..+++.=
T Consensus 197 ~~~~~l~~~l~~~~k~~~g 215 (216)
T 1eej_A 197 QPPKEMKEFLDEHQKMTSG 215 (216)
T ss_dssp CCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHCC
T ss_conf 9999999999986565547
No 20
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, structural genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=99.77 E-value=3e-17 Score=127.68 Aligned_cols=162 Identities=12% Similarity=0.108 Sum_probs=119.2
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-H--H----------------------------
Q ss_conf 88999970588820644334211344320000203799843323430-2--4----------------------------
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDS-V--S---------------------------- 114 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~--~---------------------------- 114 (232)
+++|..|+|+.||+|+.+++.+.+...+ +.+...+.++...+.... . .
T Consensus 7 k~~i~~~~D~~CPwcy~~~~~l~~l~~~-~~~~v~i~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQE-YSAFLTVKIMPGGLRPGTNTPLLPEKRAQILHHWHSVHITTGQPFTFENAL 85 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHH-HTTTCEEEEEECC----CCSBCCHHHHHHHHHHHHHHHHHHCCCCCCTTCS
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
T ss_conf 9889999728897699999999999987-599769999755646678864259999999999999999986423412104
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
Q ss_conf --------577766666666532124558888886543321134568998764311000068898640598999999999
Q gi|254780477|r 115 --------TVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAG 186 (232)
Q Consensus 115 --------~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 186 (232)
........++.....+..+.++..++......+......+.+.+++.++|++..++.+++++.+....+.++
T Consensus 86 ~~~~~~~s~~~~~~~~aa~~~~~~~~~~~~~~l~~a~~~~g~disd~~vL~~ia~~~Gld~~~~~~~l~s~~~~~~l~~~ 165 (216)
T 2in3_A 86 PEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPVFQSDEAKQRTLAG 165 (216)
T ss_dssp CTTCBCCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHH
T ss_conf 56788882999999999997560579999999999998521122203788887775399999999985057999999998
Q ss_pred HHHHHHHCCCCCCCEEEEC--CE---EECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999986188536579989--89---9618999999999999999986
Q gi|254780477|r 187 KKRASEDFAIDSTPVFFIG--GN---LYLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 187 ~~~~~~~~gi~gTPt~~Vn--G~---~~~g~~~~~~~~~~id~ll~~~ 229 (232)
..++ ..+||.|||||+|| |+ .+.|+.+++.|.++|+++|++.
T Consensus 166 ~~~a-~~~gv~GvPtfvv~~~~~~~~~~~Ga~~~~~l~~~i~~~l~~~ 212 (216)
T 2in3_A 166 FQRV-AQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWLQQH 212 (216)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHHC
T ss_pred HHHH-HHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9999-9859932887999649812773479989999999999999853
No 21
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=99.76 E-value=5.9e-19 Score=138.46 Aligned_cols=133 Identities=12% Similarity=0.106 Sum_probs=83.4
Q ss_pred CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78411689888899997058882064433421134432000020379984332343024577766666666532124558
Q gi|254780477|r 56 KDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGF 135 (232)
Q Consensus 56 ~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 135 (232)
...+.|+.+++.+|++|+||.||||+++|+++.+++.+. ..+++++.+.+.... .+...+..+.|...+...|..
T Consensus 77 ~~i~~~~~n~k~~ivvFtD~~CpyC~k~~~~l~~l~~~~----~~v~~~~~~~~~~~~-~~~~~~~~~~~a~d~~~a~~~ 151 (211)
T 1t3b_A 77 EMIVYPAKNEKHVVTVFMDITCHYCHLLHQQLKEYNDLG----ITVRYLAFPRAGMNN-QTAKQMEAIWTAKDPVFALNE 151 (211)
T ss_dssp GSEEECCTTCSEEEEEEECTTCHHHHHHHTTHHHHHHTT----EEEEEEECCSSTTCS-HHHHHHHHHHHSSSHHHHHHH
T ss_pred CCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC----CEEEEEEECCCCCCC-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 274754899888999996898822788888899862148----629999944877684-678999999974569999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCEEECCCCC
Q ss_conf 888886543321134568998764311000068898640598999999999999998618853657998-9899618999
Q gi|254780477|r 136 VSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI-GGNLYLGDMS 214 (232)
Q Consensus 136 ~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V-nG~~~~g~~~ 214 (232)
+. ... . ..+......+.++.+. ++.+||+||||||+ ||+.+.|+.+
T Consensus 152 ~~---~~~--------------------~---------~~~~~~~~~v~~~~~l-a~~lGv~GTPtiv~~dG~~i~G~~p 198 (211)
T 1t3b_A 152 AE---KGN--------------------L---------PKEVKTPNIVKKHYEL-GIQFGVRGTPSIVTSTGELIGGYLK 198 (211)
T ss_dssp HH---TTC--------------------C---------CSSCCCSSHHHHHHHH-HHHHTCCSSCEEECTTSCCCCSCCC
T ss_pred HH---HCC--------------------C---------CCCHHHCCHHHHHHHH-HHHHCCCCCCEEEECCCEEECCCCC
T ss_conf 98---556--------------------7---------6640111169999999-9995996257699879808468799
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780477|r 215 EGVFSKIIDSMI 226 (232)
Q Consensus 215 ~~~~~~~id~ll 226 (232)
+++|.++|++..
T Consensus 199 ~~~l~~~l~~~~ 210 (211)
T 1t3b_A 199 PADLLRALEETA 210 (211)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999853
No 22
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase SCO1869, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=99.75 E-value=2.1e-17 Score=128.64 Aligned_cols=163 Identities=16% Similarity=0.210 Sum_probs=116.4
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH-------------------------------
Q ss_conf 8899997058882064433421134432000020379984332343024-------------------------------
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVS------------------------------- 114 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 114 (232)
.+.|..|+|+.||||+--...+.+.+++. .+...+.+.++++.+.+..
T Consensus 2 ~mkI~~~~D~~CPwcylg~~rL~~al~~~-~~~~~v~i~~~Pf~L~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVGKARFEKALAAF-PHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLG 80 (239)
T ss_dssp CEEEEEEECSSCHHHHHHHHHHHHHHHTC-TTGGGEEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 73899998187870997699999999966-88787699997564069988665122789998851898999999999999
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHC
Q ss_conf ------------------577766666666532124558888886543321134-5689987643110000688986405
Q gi|254780477|r 115 ------------------TVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSK-NYRDALLNMAKFAGFSKNDFDTCLN 175 (232)
Q Consensus 115 ------------------~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~-~~~~~l~~~~~~~g~~~~~~~~~~~ 175 (232)
....+...+.....++....+++.+|......+... ...+.|..++...|++...+..++.
T Consensus 81 ~~~~~~gi~~~~~~~~~~~t~~a~rl~~~A~~~g~~~~~~~alf~A~f~eg~dI~~d~~vL~~iA~~~Gld~~~~~~~l~ 160 (239)
T 3gl5_A 81 AQAAAEGLAYRTRDRDHGSTFDLHRLLHLAKERGRHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVLA 160 (239)
T ss_dssp HHHHHTTCCCCCSSCEECCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCSSCCSSCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf 99987498645543454436889999999864244689999999999860777654589999999872999999999971
Q ss_pred CH-HHHHHHHHHHHHHHHHCCCCCCCEEEECCE-EECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98-999999999999998618853657998989-96189999999999999999860
Q gi|254780477|r 176 DQ-NILDDIKAGKKRASEDFAIDSTPVFFIGGN-LYLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 176 ~~-~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~-~~~g~~~~~~~~~~id~ll~~~~ 230 (232)
++ ...+.+.++.+.+ ..+||+|+|||+|||+ .+.|+.+.+.|..+|++.+++..
T Consensus 161 ~~~~~~~~l~~~~~~A-~~~GI~GvPtfvi~~~~~i~Gaqp~e~~~~~l~~~~~~~~ 216 (239)
T 3gl5_A 161 DPAAYADEVRADEREA-AQLGATGVPFFVLDRAYGVSGAQPAEVFTQALTQAWGERT 216 (239)
T ss_dssp CTTTTHHHHHHHHHHH-HHTTCCSSSEEEETTTEEEESSCCHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHH-HHCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 8576899999999999-9869942477999998888689999999999999997547
No 23
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=99.75 E-value=8.4e-17 Score=124.83 Aligned_cols=162 Identities=11% Similarity=0.133 Sum_probs=122.5
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCH--------------------------------
Q ss_conf 889999705888206443342113443200002037998433234302--------------------------------
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSV-------------------------------- 113 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 113 (232)
.++|+.|+|+.||||+.+++.+....+++ .....+.++...+.....
T Consensus 2 ~~ki~~~~D~~Cpwcy~~~~~l~~l~~~~-~~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (208)
T 3kzq_A 2 NIKLYYVHDPMCSWCWGYKPTIEKLKQQL-PGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWK 80 (208)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHS-CTTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHHH
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC
T ss_conf 16999998488986999999999999877-99758999866646444568889999999999999999997643810003
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf -----457776666666653212455888888654332113456899876431100006889864059899999999999
Q gi|254780477|r 114 -----STVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKK 188 (232)
Q Consensus 114 -----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 188 (232)
.........+.....++..++++..+++.....+......+.+..++.+.|++...+..++++.+....+..+.+
T Consensus 81 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~g~di~d~~~l~~ia~~~Gld~~~~~~~~~s~~~~~~l~~~~~ 160 (208)
T 3kzq_A 81 LCTPVRSTYQSCRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQLS 160 (208)
T ss_dssp HSCCBCCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56788778999999999996793999999999999987506421789988788739999999999861699999999999
Q ss_pred HHHHHCCCCCCCEEEE--CCEEEC---CCCCHHHHHHHHHHHHHHH
Q ss_conf 9998618853657998--989961---8999999999999999986
Q gi|254780477|r 189 RASEDFAIDSTPVFFI--GGNLYL---GDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~V--nG~~~~---g~~~~~~~~~~id~ll~~~ 229 (232)
.+ .+.||+|||||+| ||+++. |..+.+++...|++.+.+.
T Consensus 161 ~a-~~~gv~GvPtfvv~~~~~~~~~~~g~~~~~~~~~~l~e~~~~~ 205 (208)
T 3kzq_A 161 LA-KSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIEN 205 (208)
T ss_dssp HH-HHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHHHT
T ss_pred HH-HHCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99-9859975887999989988882688768999999999999972
No 24
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain ATCC 700825 / FA 1090), DSBC, structural genomics, unknown function; 2.00A {Neisseria gonorrhoeae fa 1090}
Probab=99.74 E-value=8.9e-19 Score=137.31 Aligned_cols=132 Identities=11% Similarity=0.122 Sum_probs=77.2
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41168988889999705888206443342113443200002037998433234302457776666666653212455888
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVS 137 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 137 (232)
.+.| ++|++|+||+||+||||+++++++.+.. +.....+.+...+.+... ...+....+..+ ..+.+..
T Consensus 9 ~v~G--nak~~iv~F~D~~CpyC~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~s--~~~a~~~~~~~d--~~~a~~~ 77 (147)
T 3gv1_A 9 EVRG--NGKLKVAVFSDPDCPFCKRLEHEFEKMT-----DVTVYSFMMPIAGLHPDA--ARKAQILWCQPD--RAKAWTD 77 (147)
T ss_dssp EEET--TCCEEEEEEECTTCHHHHHHHHHHTTCC-----SEEEEEEECCCTTTCTTH--HHHHHHHHTSSS--HHHHHHH
T ss_pred CCCC--CCCEEEEEEECCCCHHHHHHHHHHHHHC-----CCEEEEEEECCCCCCCHH--HHHHHHHHHCCC--HHHHHHH
T ss_conf 0268--8998999998979872898999987505-----730699980377888389--999999997427--6899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCEEECCCCCHH
Q ss_conf 8886543321134568998764311000068898640598999999999999998618853657998-989961899999
Q gi|254780477|r 138 LLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI-GGNLYLGDMSEG 216 (232)
Q Consensus 138 ~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V-nG~~~~g~~~~~ 216 (232)
.....+.. ..+......+.++.+. ++.+||+||||||+ ||+.++|..+.+
T Consensus 78 ~~~~~~~~----------------------------~~~~~~~~~i~~~~~l-a~~lGv~gTPt~~~~nG~~i~G~~~~~ 128 (147)
T 3gv1_A 78 WMRKGKFP----------------------------VGGSICDNPVAETTSL-GEQFGFNGTPTLVFPNGRTQSGYSPMP 128 (147)
T ss_dssp HHHHCCCC----------------------------TTCCCCSCSHHHHHHH-HHHTTCCSSCEEECTTSCEEESCCCTT
T ss_pred HHHCCCCC----------------------------CCHHHHHHHHHHHHHH-HHHHCCCCCCEEEEECCEEECCCCCHH
T ss_conf 99748887----------------------------5236676589999999-999299778859984994855999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999986
Q gi|254780477|r 217 VFSKIIDSMIQDS 229 (232)
Q Consensus 217 ~~~~~id~ll~~~ 229 (232)
+|+++|++.+++.
T Consensus 129 ~l~~~i~~~~k~g 141 (147)
T 3gv1_A 129 QLEEIIRKNQQEG 141 (147)
T ss_dssp HHHHHHHHTSCC-
T ss_pred HHHHHHHHHHHCC
T ss_conf 9999999998258
No 25
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=99.57 E-value=7.6e-14 Score=106.16 Aligned_cols=159 Identities=11% Similarity=0.141 Sum_probs=112.4
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------CCCCHHH--------------------
Q ss_conf 899997058882064433421134432000020379984332-----------3430245--------------------
Q gi|254780477|r 67 VTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREF-----------PLDSVST-------------------- 115 (232)
Q Consensus 67 v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~-------------------- 115 (232)
++|..|+|+.||||.-....+....+++.. .+.+.+..+ |......
T Consensus 1 ~~Id~y~D~~cP~~yl~~~~l~~l~~~~~~---~i~~~P~~L~~~~~~~g~~~p~~~~~~~k~~y~~~d~~r~a~~~~~~ 77 (203)
T 2imf_A 1 MIVDFYFDFLSPFSYLANQRLSKLAQDYGL---TIRYNAIDLARVKIAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYGIP 77 (203)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHCC---EEEEEECCHHHHHHHHTCCSCCGGGCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHCCC---EEEEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 989999648987899999999999998298---79999787011543102568620015289999999999999983998
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH
Q ss_conf --------777666666665321245588888865433211345689987643110000688986405989999999999
Q gi|254780477|r 116 --------VAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGK 187 (232)
Q Consensus 116 --------~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 187 (232)
...+...+......+....+...+|......+......+.+..++.++|++...+.+.+++++..+.+.+++
T Consensus 78 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~f~~g~di~d~~vL~~i~~~~Gld~~~~~~~l~~~e~~~~l~~~~ 157 (203)
T 2imf_A 78 LVFPANYNSRRMNIGFYYSGAEAQAAAYVNVVFNAVWGEGIAPDLESLPALVSEKLGWDRSAFEHFLSSNAATERYDEQT 157 (203)
T ss_dssp CCCCSCCCCHHHHHHGGGCCSHHHHHHHHHHHHHHHHHSCCCTTCTTHHHHHHHHHTCCHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
T ss_conf 66888771789999877767788899999999999864485411457888888870788899999970168999999999
Q ss_pred HHHHHHCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 999986188536579989899618999999999999999986
Q gi|254780477|r 188 KRASEDFAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 188 ~~~~~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~id~ll~~~ 229 (232)
+++. ..||.|+|||+|||+.+-|.--.+.+...|.++.++.
T Consensus 158 ~~A~-~~Gv~GvPtfvi~~e~f~G~Drl~~le~~L~~l~~~~ 198 (203)
T 2imf_A 158 HAAI-ERKVFGVPTMFLGDEMWWGNDRLFMLESAMGRLCRQN 198 (203)
T ss_dssp HHHH-HTTCCSSSEEEETTEEEESGGGHHHHHHHHHHHHHHH
T ss_pred HHHH-HCCCEECCEEEECCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 9999-8799078889999998852034999999999987037
No 26
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomerase; structural genomics, PSI-2, protein structure initiative; HET: MSE GTT PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=99.51 E-value=7.8e-13 Score=99.76 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=106.8
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---------------------------------
Q ss_conf 88899997058882064433421134432000020379984332343---------------------------------
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLD--------------------------------- 111 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------------------- 111 (232)
|-..|..|+|+.||+|.-.+..+.....++.. .+.+.+..+...
T Consensus 3 ~m~~Id~y~D~~cP~~yla~~~l~~l~~~~~~---~i~~~P~~l~~~~~~~g~~~~~~~~~k~~~~~~d~~r~a~~~g~~ 79 (202)
T 3fz5_A 3 AMNPIEFWFDFSSGYAFFAAQRIEALAAELGR---TVLWRPYMLGAAFSVTGARGLSSTPLKRDYAQRDWARIARQRGLT 79 (202)
T ss_dssp CCSCEEEEECTTCHHHHHHHTTHHHHHHHHTC---CEEEEECTTC----------CCSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCC---EEEEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 88768999849998999999999999997398---599998862764021178631226068999999999999981995
Q ss_pred --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
Q ss_conf --------024577766666666532124558888886543321134568998764311000068898640598999999
Q gi|254780477|r 112 --------SVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDI 183 (232)
Q Consensus 112 --------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i 183 (232)
...........++.....+....++..++..-...+......+.+..++.+.|++...+.+.+.+++..+.+
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~g~di~d~~vL~~ia~~~Gld~~~~~~~~~~~~~~~~l 159 (202)
T 3fz5_A 80 FRPPADHPHVALAATRAFYWIEAQSPDAATAFAQRVFDLYFSDRLDTASPEAVSRLGPEVGLEPEALLAGIADPALKETV 159 (202)
T ss_dssp CCCCTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTCCCTTCHHHHHTTHHHHTCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
T ss_conf 66786678763899999999986414789999999999987247785607899999987499989998883599999999
Q ss_pred HHHHHHHHHHCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 999999998618853657998989961899999999999
Q gi|254780477|r 184 KAGKKRASEDFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 184 ~~~~~~~~~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
.++.+++. +.||.|+|||+|||+.+-|.--.+.+...|
T Consensus 160 ~~~~~~a~-~~Gv~GvPtfvv~~e~f~G~Drl~~l~~~L 197 (202)
T 3fz5_A 160 RKIGEDAV-ARGIFGSPFFLVDDEPFWGWDRMEMMAEWI 197 (202)
T ss_dssp HHHHHHHH-HTTCCSSSEEEETTEEEESGGGHHHHHHHH
T ss_pred HHHHHHHH-HCCCEECCEEEECCEEEECHHHHHHHHHHH
T ss_conf 99999999-879938878999998873056699999999
No 27
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=99.37 E-value=3.1e-11 Score=89.67 Aligned_cols=152 Identities=10% Similarity=0.052 Sum_probs=103.6
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH-----------------------------
Q ss_conf 888999970588820644334211344320000203799843323430245-----------------------------
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVST----------------------------- 115 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 115 (232)
.|.+|..|+|+.||||+-....+....+++. +.+.++++...+...
T Consensus 4 ~~~~Id~y~D~~cP~cYlg~~~l~~l~~~~~-----i~i~~~P~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (226)
T 1r4w_A 4 APRVLELFYDVLSPYSWLGFEVLCRYQHLWN-----IKLKLRPALLAGIMKDSGNQPPAMVPHKGQYILKEIPLLKQLFQ 78 (226)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHTTTSS-----EEEEEEECCHHHHHHHTTCCCTTSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHCC-----CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9948999973888789999999999998749-----86999988637755333467444414553343589999999863
Q ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH---
Q ss_conf -------------------7776666666653212455888888654332113456899876431100006889864---
Q gi|254780477|r 116 -------------------VAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTC--- 173 (232)
Q Consensus 116 -------------------~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~--- 173 (232)
...+..........+....+...+|.............+.+..++.+.|++.......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~a~~~~g~di~d~~vl~~ia~~~Gl~~~~~~~~~~~ 158 (226)
T 1r4w_A 79 VPMSVPKDFFGEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHLLNK 158 (226)
T ss_dssp CCCCCCSSTTTHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHHHTT
T ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 44327753344678877178999999998526006999999988888724655688899999999859977899999985
Q ss_pred HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC----CEEECCCCCHHHHHHHH
Q ss_conf 05989999999999999986188536579989----89961899999999999
Q gi|254780477|r 174 LNDQNILDDIKAGKKRASEDFAIDSTPVFFIG----GNLYLGDMSEGVFSKII 222 (232)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~Vn----G~~~~g~~~~~~~~~~i 222 (232)
..+.+..+.+.++++++. ..||.|+|||+|| ++.+-|.--.+.+...|
T Consensus 159 ~~~~~~k~~l~~~~~~A~-~~GvfGvPtfvi~~~g~~e~f~G~Drl~~l~~~L 210 (226)
T 1r4w_A 159 ISTELVKSKLRETTGAAC-KYGAFGLPTTVAHVDGKTYMLFGSDRMELLAYLL 210 (226)
T ss_dssp TTSHHHHHHHHHHHHHHH-HTTCCSSCEEEEEETTEEEEEESTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH-HCCCCCCCEEEEECCCCCCEEECCCCHHHHHHHH
T ss_conf 257999999999999999-8798068879992489875255764799999997
No 28
>1yzx_A Glutathione S-transferase kappa 1; glutathione sulfinate, peroxidase; HET: GSF; 1.93A {Homo sapiens}
Probab=99.37 E-value=3.1e-11 Score=89.60 Aligned_cols=151 Identities=11% Similarity=0.065 Sum_probs=103.5
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCH----------H---------------------
Q ss_conf 889999705888206443342113443200002037998433234302----------4---------------------
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSV----------S--------------------- 114 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~--------------------- 114 (232)
|.+|..|+|+.||||+-....+....+++. +.+.++++..... .
T Consensus 5 ~~~I~~y~D~~cP~~Ylg~~~l~~l~~~~~-----v~I~~~P~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (226)
T 1yzx_A 5 PRTVELFYDVLSPYSWLGFEILCRYQNIWN-----INLQLRPSLITGIMKDSGNKPPGLLPRKGLYMANDLKLLRHHLQI 79 (226)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHTTTSS-----EEEEEEECCHHHHHHHHTCCCGGGSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHCC-----CEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 967899984988889999999999998749-----879999774273122223343102155665689999999997403
Q ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HH
Q ss_conf -----------------5777666666665321245588888865433211345689987643110000688986---40
Q gi|254780477|r 115 -----------------TVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDT---CL 174 (232)
Q Consensus 115 -----------------~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~---~~ 174 (232)
........++..........+...+|......+......+.+..++.++|++...... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~di~~~~~l~~~~~~~gl~~~~~~~~~~~~ 159 (226)
T 1yzx_A 80 PIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKI 159 (226)
T ss_dssp CCCCCTTHHHHHHTTCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHTCCHHHHHHHHTTT
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 32156445444420015999999999998631579999999999875048875641579999998499566789999986
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC----CEEECCCCCHHHHHHHH
Q ss_conf 5989999999999999986188536579989----89961899999999999
Q gi|254780477|r 175 NDQNILDDIKAGKKRASEDFAIDSTPVFFIG----GNLYLGDMSEGVFSKII 222 (232)
Q Consensus 175 ~~~~~~~~i~~~~~~~~~~~gi~gTPt~~Vn----G~~~~g~~~~~~~~~~i 222 (232)
.+.+..+.+.++++++. ..|+.|+|||+|| ++.+-|.--.+.+...|
T Consensus 160 ~~~~~k~~l~~~~~~A~-~~Gv~GvPtfvvn~~g~~e~f~G~Drl~~l~~~L 210 (226)
T 1yzx_A 160 ATPKVKNQLKETTEAAC-RYGAFGLPITVAHVDGQTHMLFGSDRMELLAHLL 210 (226)
T ss_dssp TSHHHHHHHHHHHHHHH-HTTCSSSCEEEEEETTEEEEEESTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HCCCEECCEEEEECCCCCCEEECCCCHHHHHHHH
T ss_conf 05789999999999999-8698278889995389976352345299999997
No 29
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.10 E-value=1.5e-10 Score=85.28 Aligned_cols=81 Identities=16% Similarity=0.108 Sum_probs=53.1
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHH--HHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 898888999970588820644334211--344320000203799843323430245777666666665321245588888
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTF--KYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLL 139 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 139 (232)
+...+++|+|||||.||||+.|++.+. +.+++.+.+...+.+.+.+++.+ ..+..++...+....++.++.+++.+
T Consensus 110 p~~~~~~VvEff~y~CphC~~~e~~l~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~a~a~~~a~~~g~~~~~h~~l 187 (197)
T 1un2_A 110 PVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGG--DLGKDLTQAWAVAMALGVEDKVTVPL 187 (197)
T ss_dssp CCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSSH--HHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC--CCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 8999966999981699316556277524899997689973899984577788--33799999999999869888999999
Q ss_pred HHHHH
Q ss_conf 86543
Q gi|254780477|r 140 FNKQD 144 (232)
Q Consensus 140 ~~~q~ 144 (232)
|+.-.
T Consensus 188 F~aih 192 (197)
T 1un2_A 188 FEGVQ 192 (197)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99998
No 30
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.07 E-value=1.7e-10 Score=84.96 Aligned_cols=78 Identities=14% Similarity=0.267 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCC---------CHHHHHHH
Q ss_conf 568998764311000068898640598999999999999998618853657998989961899---------99999999
Q gi|254780477|r 151 NYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDM---------SEGVFSKI 221 (232)
Q Consensus 151 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~~~~g~~---------~~~~~~~~ 221 (232)
.+.+.+.+++...|++..++..|+++......+.++...+ +.+||+|||||+|||+++.+.. ..+++..+
T Consensus 4 ~s~~~i~~i~~~~Gld~~~f~~~~~s~~~~~~v~~~~~~~-~~~gi~GvPtfivnGky~v~~~~~~s~~~~~~~~~~~~~ 82 (197)
T 1un2_A 4 RSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAA-ADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADT 82 (197)
T ss_dssp SSHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHH-HHTTCCSSSEEEETTTEEECGGGSCCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999999985999999999971989999999999999-982897288799989888554334512345657889999
Q ss_pred HHHHHHHH
Q ss_conf 99999986
Q gi|254780477|r 222 IDSMIQDS 229 (232)
Q Consensus 222 id~ll~~~ 229 (232)
++.|+++.
T Consensus 83 v~~L~~k~ 90 (197)
T 1un2_A 83 VKYLSEKK 90 (197)
T ss_dssp HHHHTC--
T ss_pred HHHHHHCC
T ss_conf 99998602
No 31
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.62 E-value=1.6e-07 Score=66.19 Aligned_cols=93 Identities=13% Similarity=0.213 Sum_probs=62.1
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8988889999705888206443342113443200-002037998433234302457776666666653212455888888
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKY-IKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLF 140 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 140 (232)
+..+++.++.|+...||||+++++++.+..++.. .....+.++-
T Consensus 15 ~~~~~~~Lv~F~a~~Cp~Ck~~~~~i~~~~~~~~~~~~~~i~~v~----------------------------------- 59 (116)
T 3dml_A 15 DDKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQ----------------------------------- 59 (116)
T ss_dssp ----CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEE-----------------------------------
T ss_pred HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE-----------------------------------
T ss_conf 113684899998999843787468888776552551268538998-----------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE--CCE---EECCCCCH
Q ss_conf 6543321134568998764311000068898640598999999999999998618853657998--989---96189999
Q gi|254780477|r 141 NKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI--GGN---LYLGDMSE 215 (232)
Q Consensus 141 ~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V--nG~---~~~g~~~~ 215 (232)
++.. .+ ...+.+++|.|||||++ ||+ .+.|..+.
T Consensus 60 ------------------------vd~~------~~-----------~~l~~~~~V~g~PT~i~~~~G~~v~r~~Gy~~~ 98 (116)
T 3dml_A 60 ------------------------MRDP------LP-----------PGLELARPVTFTPTFVLMAGDVESGRLEGYPGE 98 (116)
T ss_dssp ------------------------TTSC------CC-----------TTCBCSSCCCSSSEEEEEETTEEEEEEECCCCH
T ss_pred ------------------------ECCC------CC-----------HHHHHHCCCCCCCEEEEEECCEEEEEECCCCCH
T ss_conf ------------------------1476------69-----------889998697358848986399996356699999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999860
Q gi|254780477|r 216 GVFSKIIDSMIQDST 230 (232)
Q Consensus 216 ~~~~~~id~ll~~~~ 230 (232)
+.|..+|+.+|+++.
T Consensus 99 e~F~~~L~~~l~~~~ 113 (116)
T 3dml_A 99 DFFWPMLARLIGQAE 113 (116)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999984138
No 32
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB structural genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis H37RV}
Probab=98.33 E-value=1.2e-06 Score=60.76 Aligned_cols=120 Identities=14% Similarity=0.271 Sum_probs=68.2
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16898888999970588820644334211344320000203799843323430245777666666665321245588888
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLL 139 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 139 (232)
+-+-..|++|+.|+-+.||+|.+..+.+..+.+++. +.+ +.++....+........
T Consensus 77 L~d~kGKvVll~FwatwC~~C~~elp~L~~l~~~y~-d~g-l~vv~v~~d~~~~e~~~---------------------- 132 (352)
T 2hyx_A 77 LKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYK-DSG-LAVIGVHTPEYAFEKVP---------------------- 132 (352)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-GGT-EEEEEEECCSSGGGGCH----------------------
T ss_pred HHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC-CCC-EEEEEEECCCCHHHHHH----------------------
T ss_conf 999399969999998979869999999999998700-473-89999957873022139----------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCC
Q ss_conf 86543321134568998764311000068898640598999999999999998618853657998---9899---61899
Q gi|254780477|r 140 FNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGDM 213 (232)
Q Consensus 140 ~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~~ 213 (232)
+.+..+....++.-. ...... ....+.+|++++|++|| ||+. ..|..
T Consensus 133 --------------~~v~~~~~~~~i~~p---v~~D~~----------~~i~~~y~v~~~P~~~lID~~G~i~~~~~G~~ 185 (352)
T 2hyx_A 133 --------------GNVAKGAANLGISYP---IALDNN----------YATWTNYRNRYWPAEYLIDATGTVRHIKFGEG 185 (352)
T ss_dssp --------------HHHHHHHHHHTCCSC---EEECTT----------SHHHHHTTCCEESEEEEECTTSBEEEEEESBC
T ss_pred --------------HHHHHHHHHCCCCCC---CCCCCC----------HHHHHHCCCCEEEEEEEECCCCEEEEEEECCC
T ss_conf --------------999999998199876---334770----------89999849976546999899987999993789
Q ss_pred CHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999860
Q gi|254780477|r 214 SEGVFSKIIDSMIQDST 230 (232)
Q Consensus 214 ~~~~~~~~id~ll~~~~ 230 (232)
++++++++|++||++++
T Consensus 186 ~~~~le~~I~~LL~e~~ 202 (352)
T 2hyx_A 186 DYNVTETLVRQLLNDAK 202 (352)
T ss_dssp CHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHCC
T ss_conf 98999999999986558
No 33
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.30 E-value=5.3e-07 Score=62.91 Aligned_cols=37 Identities=16% Similarity=0.360 Sum_probs=32.0
Q ss_pred HHHCCCCCCCEEEECCE-EECCCCCHHHHHHHHHHHHH
Q ss_conf 98618853657998989-96189999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFIGGN-LYLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 191 ~~~~gi~gTPt~~VnG~-~~~g~~~~~~~~~~id~ll~ 227 (232)
.+++||.|+||+++||+ .+.|..+.+++.+.|++.|+
T Consensus 48 ~~~~~V~~~Pt~~~~~~~~~~G~~~~~~l~~~i~~~le 85 (85)
T 1nho_A 48 AIEYGLMAVPAIAINGVVRFVGAPSREELFEAINDEME 85 (85)
T ss_dssp GGGTCSSCSSEEEETTTEEEECSSCCHHHHHHHHHHCC
T ss_pred HHHCCCEEECEEEEECCEEEECCCCHHHHHHHHHHHHC
T ss_conf 99829827597999075799948999999999998429
No 34
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.21 E-value=2.2e-06 Score=58.93 Aligned_cols=83 Identities=16% Similarity=0.341 Sum_probs=56.6
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88899997058882064433421134432000020379984332343024577766666666532124558888886543
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQD 144 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~ 144 (232)
.|++|+.|....||||+.+.+.+.....+ +.+...+..+..
T Consensus 2 ~kv~v~~F~a~wC~~C~~~~p~~~~l~~~-~~~~~~~~~~~~-------------------------------------- 42 (85)
T 1fo5_A 2 SKVKIELFTSPMCPHCPAAKRVVEEVANE-MPDAVEVEYINV-------------------------------------- 42 (85)
T ss_dssp CCEEEEEEECCCSSCCCTHHHHHHHHHHH-CSSSEEEEEEES--------------------------------------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHH-CCEEEEEEEEEC--------------------------------------
T ss_conf 96399999999886269889887554220-210256777505--------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCE-EECCCCCHHHHHHHHH
Q ss_conf 321134568998764311000068898640598999999999999998618853657998989-9618999999999999
Q gi|254780477|r 145 DWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGN-LYLGDMSEGVFSKIID 223 (232)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG~-~~~g~~~~~~~~~~id 223 (232)
+ ++ .+.++++||+|+||++++++ .+.|..+.+++.+.|+
T Consensus 43 ---------------------~--------~~-----------~~l~~~~~V~~~PT~~i~~~g~~~G~~~~~~l~~~i~ 82 (85)
T 1fo5_A 43 ---------------------M--------EN-----------PQKAMEYGIMAVPTIVINGDVEFIGAPTKEALVEAIK 82 (85)
T ss_dssp ---------------------S--------SS-----------CCTTTSTTTCCSSEEEETTEEECCSSSSSHHHHHHHH
T ss_pred ---------------------C--------CC-----------HHHHHHCCCEEECEEEEECCCEEECCCCHHHHHHHHH
T ss_conf ---------------------4--------58-----------9999981982748899986959987999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780477|r 224 SMI 226 (232)
Q Consensus 224 ~ll 226 (232)
+.|
T Consensus 83 ~~L 85 (85)
T 1fo5_A 83 KRL 85 (85)
T ss_dssp HHC
T ss_pred HCC
T ss_conf 539
No 35
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreductase, blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.19 E-value=2.4e-06 Score=58.71 Aligned_cols=41 Identities=20% Similarity=0.299 Sum_probs=33.4
Q ss_pred HHHHCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99861885365799898996189999999999999999860
Q gi|254780477|r 190 ASEDFAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 190 ~~~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~id~ll~~~~ 230 (232)
..+++||+|+||.++||+++.|..+.+++.+..-..++|.|
T Consensus 243 lc~~~~I~g~PTw~~~G~~~~G~~~~~~Lae~sG~~~~~~~ 283 (291)
T 3kp9_A 243 ECTEAGITSYPTWIINGRTYTGVRSLEALAVASGYPLEEGR 283 (291)
T ss_dssp HHHTTTCCSTTEEEETTEEEESCCCHHHHHHHTCCCC----
T ss_pred HHHHCCCCCCCEEEECCEEECCCCCHHHHHHHHCCCCCCCC
T ss_conf 99985997236488999980275799999998789976666
No 36
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.17 E-value=1.3e-05 Score=54.16 Aligned_cols=40 Identities=20% Similarity=0.503 Sum_probs=33.2
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999999860
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~~ 230 (232)
++++||+|+||+++ ||+. +.|..+.+++++.|+.+|+...
T Consensus 71 ~~~~~V~~~PT~~~~~~G~~v~~~~G~~~~~~l~~~i~~~l~~~~ 115 (140)
T 3hz4_A 71 AEKYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQHGE 115 (140)
T ss_dssp HHHHTCCEESEEEEEETTEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEECEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 998399475969999899999999799999999999999985244
No 37
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.09 E-value=1e-05 Score=54.77 Aligned_cols=38 Identities=13% Similarity=0.351 Sum_probs=33.0
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
++++||+|+||+++ ||+. +.|..+.+++++.|+++|.|
T Consensus 62 ~~~~~V~~~PT~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~e 104 (104)
T 2e0q_A 62 AARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLLGE 104 (104)
T ss_dssp HHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 9981998477899999997989997899999999999998684
No 38
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix K1}
Probab=98.06 E-value=1.8e-05 Score=53.16 Aligned_cols=40 Identities=23% Similarity=0.393 Sum_probs=33.5
Q ss_pred HHHHHCCCCCCCEEEECCEE-ECCCCCHHHHHHHHHHHHHH
Q ss_conf 99986188536579989899-61899999999999999998
Q gi|254780477|r 189 RASEDFAIDSTPVFFIGGNL-YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~VnG~~-~~g~~~~~~~~~~id~ll~~ 228 (232)
+.++++||.|+||+++||+. +.|..+.+++...|+...+.
T Consensus 187 ~l~~~y~V~~vPti~ing~~~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 187 DIADKYGVMSVPSIAINGYLVFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 78987496013769999957885389999999999986330
No 39
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.06 E-value=2.8e-05 Score=51.99 Aligned_cols=39 Identities=23% Similarity=0.503 Sum_probs=33.2
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
.+++||+|+||+++ ||+. +.|..+.++|.+.|++.|.+.
T Consensus 102 ~~~~~V~~~PTii~fk~G~~v~~~~G~~~~~~l~~~I~~~L~k~ 145 (148)
T 3p2a_A 102 STRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHSC
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 66579550877999989989899978999999999999986359
No 40
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.05 E-value=5.1e-05 Score=50.33 Aligned_cols=37 Identities=19% Similarity=0.585 Sum_probs=31.1
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~ 227 (232)
++++||+|+||+++ ||+. +.|..+.+++++.|++.|.
T Consensus 67 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~La 108 (108)
T 2trx_A 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHCCCCEECEEEEEECCEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 987598146849999899798999789999999999999639
No 41
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus HB8}
Probab=98.04 E-value=2.3e-05 Score=52.56 Aligned_cols=84 Identities=15% Similarity=0.300 Sum_probs=58.4
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88899997058882064433421134432000020379984332343024577766666666532124558888886543
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQD 144 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~ 144 (232)
.+.+|+.|+...|++|+.+.+.+....+++... +.++...
T Consensus 50 ~k~vlV~F~a~WC~~Ck~~~p~l~~~~~~~~~~---v~~~~id------------------------------------- 89 (140)
T 1v98_A 50 APLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVN------------------------------------- 89 (140)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEE-------------------------------------
T ss_pred CCCEEEEEECCCCHHHHHHCCCHHHHHHHHCCE---EEEEEEE-------------------------------------
T ss_conf 997999998999976884464104888740636---8999995-------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHH
Q ss_conf 321134568998764311000068898640598999999999999998618853657998--9899---61899999999
Q gi|254780477|r 145 DWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFS 219 (232)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~ 219 (232)
. ..+ ....++++|+++||+++ ||+. +.|..+.+++.
T Consensus 90 ----------------------~------~~~-----------~~l~~~~~V~~~Pt~~~~k~G~~v~~~~G~~~~~~l~ 130 (140)
T 1v98_A 90 ----------------------V------DEH-----------PGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLE 130 (140)
T ss_dssp ----------------------T------TTC-----------HHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHH
T ss_pred ----------------------C------CCC-----------HHHHHHHCCCCCCEEEEEECCEEEEEEECCCCHHHHH
T ss_conf ----------------------5------556-----------8889982977348699998999989997999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780477|r 220 KIIDSMIQ 227 (232)
Q Consensus 220 ~~id~ll~ 227 (232)
+.|+++|+
T Consensus 131 ~~I~~~L~ 138 (140)
T 1v98_A 131 ERLRPYLE 138 (140)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
T ss_conf 99999877
No 42
>3gnj_A Thioredoxin domain protein; APC92103, structural genomics, PSI-2, protein structure initiative; 1.99A {Desulfitobacterium hafniense dcb-2}
Probab=98.04 E-value=2.3e-05 Score=52.58 Aligned_cols=38 Identities=18% Similarity=0.512 Sum_probs=32.5
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
+++++|+++||+++ ||+. +.|..+.++++..|+.+|++
T Consensus 69 ~~~~~I~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 111 (111)
T 3gnj_A 69 FQRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADVLED 111 (111)
T ss_dssp HHHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 9971996268799997997999997899999999999998667
No 43
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.03 E-value=1.4e-05 Score=53.96 Aligned_cols=116 Identities=13% Similarity=0.297 Sum_probs=63.4
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98888999970588820644334211344320000203799843323430245777666666665321245588888865
Q gi|254780477|r 63 KDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNK 142 (232)
Q Consensus 63 ~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
...+++|+.|+...||+|....+.+.....+ +.+... ++....+..........
T Consensus 27 ~~gk~vll~f~a~wC~~C~~~~~~l~~l~~~-~~d~~~--vi~i~~~~~~~~~~~~~----------------------- 80 (148)
T 2b5x_A 27 IGEKPTLIHFWSISCHLCKEAMPQVNEFRDK-YQDQLN--VVAVHMPRSEDDLDPGK----------------------- 80 (148)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHH-HTTTSE--EEEEECCCSTTTSSHHH-----------------------
T ss_pred HCCCEEEEEEECCCCHHHHHHHHHHHHCCCC-CCCCCC--CCCCCCCCCCCCCCHHH-----------------------
T ss_conf 5969899999899898899999886401222-300010--01223466432210688-----------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCCCHH
Q ss_conf 43321134568998764311000068898640598999999999999998618853657998---9899---61899999
Q gi|254780477|r 143 QDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGDMSEG 216 (232)
Q Consensus 143 q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~~~~~ 216 (232)
+..+....++.-..+ .+.. ...++.+|+.++|++|| ||+. ..|..+.+
T Consensus 81 -------------~~~~~~~~~~~~p~~---~D~~----------~~~~~~~~v~~~P~~~iid~~G~i~~~~~G~~~~~ 134 (148)
T 2b5x_A 81 -------------IKETAAEHDITQPIF---VDSD----------HALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMK 134 (148)
T ss_dssp -------------HHHHHHHTTCCSCEE---ECSS----------CHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTH
T ss_pred -------------HHHHHHHCCCCCCCC---CCCC----------HHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCHH
T ss_conf -------------888999729987864---3860----------89999839990487999979998999995899999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999860
Q gi|254780477|r 217 VFSKIIDSMIQDST 230 (232)
Q Consensus 217 ~~~~~id~ll~~~~ 230 (232)
++.+.|+++|+|+.
T Consensus 135 ~l~~~i~~ll~e~~ 148 (148)
T 2b5x_A 135 MLEKRVNRVLAETE 148 (148)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999999982669
No 44
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.03 E-value=1.8e-05 Score=53.18 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=31.2
Q ss_pred HHHCCCCCCCEEEE--CCE---EECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998--989---961899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGN---LYLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~---~~~g~~~~~~~~~~id~ll~~ 228 (232)
++++||.|+||+++ +|+ .+.|..+.++|.+.|+++|.|
T Consensus 98 ~~~~~V~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~i~~~l~k 140 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC-
T ss_pred HHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 9862980078799997997899997789999999999998744
No 45
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.00 E-value=4.2e-05 Score=50.89 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=29.7
Q ss_pred HHHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998---9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll 226 (232)
++.+||+|+||+++ ||+. +.|..+.++|.+.|+++.
T Consensus 75 ~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~l~ 116 (126)
T 2l57_A 75 AYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 552567778969999589979999968999999999999828
No 46
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron transport, oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.96 E-value=6.1e-05 Score=49.85 Aligned_cols=37 Identities=14% Similarity=0.484 Sum_probs=31.3
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 998618853657998--9899---618999999999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
..++++|+++||+++ ||+. +.|..+.+++++.|+++|
T Consensus 77 l~~~~~V~~~Pti~~~~~G~~v~~~~G~~~~~~l~~~i~k~l 118 (119)
T 1w4v_A 77 LAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 687533765386999989989889978999999999999960
No 47
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.95 E-value=4e-05 Score=51.04 Aligned_cols=86 Identities=13% Similarity=0.215 Sum_probs=57.9
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89888899997058882064433421134432000020379984332343024577766666666532124558888886
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFN 141 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
..+.| +++.|....||||+.+.+.+.+..+++ .+. +.+.....
T Consensus 62 ~~~~p-vlV~Fya~wC~~Ck~~~p~~~~l~~~~-~~~--v~~~~Vd~--------------------------------- 104 (155)
T 2ppt_A 62 RDDLP-LLVDFWAPWCGPCRQMAPQFQAAAATL-AGQ--VRLAKIDT--------------------------------- 104 (155)
T ss_dssp TCSSC-EEEEEECTTCHHHHHHHHHHHHHHHHH-TTT--CEEEEEET---------------------------------
T ss_pred HCCCC-EEEEEECCCCHHHHHHHHHHHHHHHHC-CCC--EEEEEEEC---------------------------------
T ss_conf 08995-999997898988998769999998751-682--69999824---------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE--CCEE---ECCCCCHH
Q ss_conf 543321134568998764311000068898640598999999999999998618853657998--9899---61899999
Q gi|254780477|r 142 KQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI--GGNL---YLGDMSEG 216 (232)
Q Consensus 142 ~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V--nG~~---~~g~~~~~ 216 (232)
+ .+ ....++++|+|+||+++ ||+. +.|..+.+
T Consensus 105 ------------------------d--------~~-----------~~l~~~~~V~~~PTii~f~~G~~v~~~~G~~~~~ 141 (155)
T 2ppt_A 105 ------------------------Q--------AH-----------PAVAGRHRIQGIPAFILFHKGRELARAAGARPAS 141 (155)
T ss_dssp ------------------------T--------TS-----------THHHHHTTCCSSSEEEEEETTEEEEEEESCCCHH
T ss_pred ------------------------C--------CC-----------HHHHHHHCCCCCCEEEEEECCEEEEEEECCCCHH
T ss_conf ------------------------3--------56-----------8899972066678799998999989997999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780477|r 217 VFSKIIDSMIQ 227 (232)
Q Consensus 217 ~~~~~id~ll~ 227 (232)
++.+.|++.|.
T Consensus 142 ~l~~fi~k~lg 152 (155)
T 2ppt_A 142 ELVGFVRGKLG 152 (155)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHCC
T ss_conf 99999998607
No 48
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.94 E-value=4.1e-05 Score=50.97 Aligned_cols=39 Identities=10% Similarity=0.233 Sum_probs=30.3
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 998618853657998--9899---61899999999999999998
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
..+++||+|+||+++ ||+. +.|..++..+...+..++..
T Consensus 84 ~~~~~~I~~~PTli~~k~Gk~v~r~~G~~p~~~~~e~~~~i~~~ 127 (135)
T 3emx_A 84 EMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred HHHHHCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 99853734668699998998988998899668999999998778
No 49
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.90 E-value=3.2e-05 Score=51.65 Aligned_cols=35 Identities=14% Similarity=0.394 Sum_probs=28.9
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSM 225 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~l 225 (232)
.+++||+|+||+++ ||+. +.|..+.+++.+.|++-
T Consensus 66 ~~~~~i~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~i~k~ 105 (106)
T 3die_A 66 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp HHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHC
T ss_conf 9860988768699998999999997889999999999961
No 50
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.90 E-value=2.5e-05 Score=52.28 Aligned_cols=36 Identities=19% Similarity=0.591 Sum_probs=30.6
Q ss_pred HHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHH
Q ss_conf 8618853657998--9899---6189999999999999999
Q gi|254780477|r 192 EDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 192 ~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~ 227 (232)
+++||+++||+++ ||+. +.|..+.+++++.|++.|.
T Consensus 88 ~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~i~~~La 128 (128)
T 2o8v_B 88 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp GGGTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 77586669989999899898999789999999999999639
No 51
>1t00_A Thioredoxin, TRX; structure, redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor A3}
Probab=97.87 E-value=6.7e-05 Score=49.60 Aligned_cols=38 Identities=18% Similarity=0.506 Sum_probs=31.7
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
++.++|.|+||+++ ||+. +.|..+.+++.+.|+++|++
T Consensus 70 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~e 112 (112)
T 1t00_A 70 AAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFIAD 112 (112)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTHHHHCC
T ss_pred HHHHCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 8860877898799998999989998889999999999998478
No 52
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, alternative splicing, FBP interacting repressor, RRM, electron transport; 2.20A {Escherichia coli O157}
Probab=97.86 E-value=4.8e-05 Score=50.51 Aligned_cols=38 Identities=21% Similarity=0.580 Sum_probs=28.9
Q ss_pred HHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 8618853657998--9899---618999999999999999986
Q gi|254780477|r 192 EDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 192 ~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
+++||+|+||+++ ||+. +.|..+.+++++.|++.|.-+
T Consensus 78 ~~~~V~~~PT~~~~k~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 120 (222)
T 3dxb_A 78 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp GGGTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred HHCCCEEECEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCC
T ss_conf 9849766086999989999899978586899999999864876
No 53
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Aquifex aeolicus VF5} PDB: 2ayt_A
Probab=97.85 E-value=8.7e-05 Score=48.89 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=36.6
Q ss_pred HHHHHCCCCCCCEEEECCE--EECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9998618853657998989--961899999999999999998603
Q gi|254780477|r 189 RASEDFAIDSTPVFFIGGN--LYLGDMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~VnG~--~~~g~~~~~~~~~~id~ll~~~~~ 231 (232)
...+++||+|.||+++||+ .+.|..+.+++.+.|...+++.++
T Consensus 180 ~~~~~~~i~~~Pti~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~ 224 (229)
T 2ywm_A 180 DLAEQFQVVGVPKIVINKGVAEFVGAQPENAFLGYIMAVYEKLKR 224 (229)
T ss_dssp HHHHHTTCCSSSEEEEGGGTEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 579876972122699879646875789999999999999987667
No 54
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.84 E-value=0.00013 Score=47.89 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=26.8
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHH
Q ss_conf 998618853657998--9899---61899999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKII 222 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~i 222 (232)
.++.+||.|+||+++ ||+. +.|..+.++++..|
T Consensus 79 ~~~~~~i~~vPtl~~~k~G~~~~~~~g~~s~~~i~~Fi 116 (118)
T 1zma_A 79 FRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFA 116 (118)
T ss_dssp HHHHHTCCSSCEEEEEETTEEEEECCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHH
T ss_conf 45223043787799998998999888989999999987
No 55
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=97.84 E-value=4e-05 Score=51.01 Aligned_cols=40 Identities=15% Similarity=0.534 Sum_probs=33.4
Q ss_pred HHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 8618853657998---9899---61899999999999999998603
Q gi|254780477|r 192 EDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 192 ~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~~~ 231 (232)
+.+|+.++|+++| ||+. +.|..+.+.+.+.|++||+++.+
T Consensus 114 ~~~~v~~~P~~~lID~~G~I~~~~~G~~~~~~l~~~i~~lL~e~~~ 159 (160)
T 3lor_A 114 KKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSETDE 159 (160)
T ss_dssp HHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTCC--
T ss_pred CCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
T ss_conf 0122244503999879994999982789999999999999758024
No 56
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution, oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.83 E-value=7.5e-05 Score=49.30 Aligned_cols=41 Identities=12% Similarity=0.401 Sum_probs=33.6
Q ss_pred HHHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 98618853657998---9899---61899999999999999998603
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~~~ 231 (232)
.+.+|++|+|+.+| ||+. +.|..+.+++++.|+.+|+|.=|
T Consensus 110 ~~~~~v~~~P~~~liD~~G~i~~~~~G~~~~~~l~~~l~~~l~k~l~ 156 (156)
T 1kng_A 110 SIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKALK 156 (156)
T ss_dssp HHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHHHC-
T ss_pred HHHCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC
T ss_conf 99818987782999949997999997889989999999999999739
No 57
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8} PDB: 2cvk_A
Probab=97.83 E-value=8.2e-05 Score=49.06 Aligned_cols=38 Identities=13% Similarity=0.332 Sum_probs=31.8
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
++++||+|+||+++ ||+. +.|..+.+++.+.|++.|+-
T Consensus 65 ~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~i~~~l~s 107 (109)
T 2yzu_A 65 AMRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 9985988356499999999989997889999999999985788
No 58
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.83 E-value=2.3e-05 Score=52.52 Aligned_cols=83 Identities=14% Similarity=0.292 Sum_probs=56.5
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999970588820644334211344320000203799843323430245777666666665321245588888865433
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQDD 145 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~ 145 (232)
+.+++.|....||+|+.+.+.+.+..+++ .+. +.++....
T Consensus 18 k~vvv~F~a~wC~~C~~~~~~~~~~~~~~-~~~--v~f~~vd~------------------------------------- 57 (105)
T 1nsw_A 18 GPVLVDFWAAWCGPCRMMAPVLEEFAEAH-ADK--VTVAKLNV------------------------------------- 57 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHS-TTT--CEEEEEET-------------------------------------
T ss_pred CCEEEEEECCCCCCHHCCCCCHHHHHHHC-CCC--EEEEEEEC-------------------------------------
T ss_conf 98999998999822232284079998754-896--69999999-------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHH
Q ss_conf 21134568998764311000068898640598999999999999998618853657998--9899---618999999999
Q gi|254780477|r 146 WINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSK 220 (232)
Q Consensus 146 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~ 220 (232)
+ .. ...++++||.|+||+++ ||+. +.|..+.+++++
T Consensus 58 --------------------d--------~~-----------~~~~~~~~V~~~Pt~~~f~~G~~v~~~~G~~~~~~l~~ 98 (105)
T 1nsw_A 58 --------------------D--------EN-----------PETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEA 98 (105)
T ss_dssp --------------------T--------TC-----------HHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHH
T ss_pred --------------------C--------CC-----------HHHHHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHH
T ss_conf --------------------8--------78-----------64698678310638999989979889978899999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780477|r 221 IIDSMIQ 227 (232)
Q Consensus 221 ~id~ll~ 227 (232)
.|+++|+
T Consensus 99 ~i~~~L~ 105 (105)
T 1nsw_A 99 QLADVLQ 105 (105)
T ss_dssp HTTTTTC
T ss_pred HHHHHHC
T ss_conf 9999749
No 59
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.82 E-value=7e-05 Score=49.47 Aligned_cols=34 Identities=15% Similarity=0.499 Sum_probs=28.3
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDS 224 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ 224 (232)
++++||+|+||+++ ||+. +.|..+.+++++.|++
T Consensus 67 ~~~~~V~~~PT~~~~~~G~~v~~~~G~~~~~~l~~~ie~ 105 (107)
T 2i4a_A 67 PNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVES 105 (107)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred HHCCCEEECCEEEEEECCEEEEEEECCCCHHHHHHHHHH
T ss_conf 735621670689999999998999789999999999996
No 60
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.82 E-value=0.00011 Score=48.22 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=31.4
Q ss_pred HHHHCCCCCCCEEEE--CCEE--ECCCCCHHHHHHHHHHHHHH
Q ss_conf 998618853657998--9899--61899999999999999998
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL--YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~--~~g~~~~~~~~~~id~ll~~ 228 (232)
..++++|+++|||++ ||+. +.|..+.+.|.+.|+++++.
T Consensus 83 l~~~~~I~~~PT~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~ 125 (140)
T 2dj1_A 83 LASKFDVSGYPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEECCSCCCHHHHHHHHHHHHSS
T ss_pred HHHHCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 7886398542869999899999976489999999999997578
No 61
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.81 E-value=2.7e-05 Score=52.14 Aligned_cols=39 Identities=10% Similarity=0.409 Sum_probs=31.9
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
++++||+|+||+++ ||+. +.|..+.+++.+.|++.|.|-
T Consensus 64 ~~~~~V~~~Pt~i~~k~G~~v~~~~G~~~~~~l~~~i~~~L~e~ 107 (112)
T 2voc_A 64 AGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp HHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred HHHCCCCEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCHH
T ss_conf 99769833217999989989999968999999999999861401
No 62
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.81 E-value=0.00014 Score=47.66 Aligned_cols=36 Identities=17% Similarity=0.482 Sum_probs=30.2
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
.+++||+|+||+++ ||+. +.|..+.+++++.|++.|
T Consensus 65 ~~~~~V~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~i~~~L 105 (105)
T 1fb6_A 65 ATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 99769750237999989979888878999999999999609
No 63
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Shigella flexneri 2a str} PDB: 2hfd_A
Probab=97.80 E-value=8.6e-05 Score=48.93 Aligned_cols=43 Identities=16% Similarity=0.321 Sum_probs=36.7
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 998618853657998--9899---618999999999999999986039
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDSTRR 232 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~~~~ 232 (232)
.++++||.+.||+++ ||+. +.|..+++++.+.|..+|+.+.+|
T Consensus 83 la~~~~V~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~l~~ll~~~~~~ 130 (140)
T 2qgv_A 83 IGDRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQER 130 (140)
T ss_dssp HHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-----
T ss_pred HHHHHCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCHHHH
T ss_conf 999959911782799999969687758999999999999986501677
No 64
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.76 E-value=0.00015 Score=47.33 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=29.6
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~ 227 (232)
.+.+||.++|||++ ||+. +.|. +.+++.+.|++.|+
T Consensus 67 ~~~~~V~~~Pt~~~~~~G~~v~~~~G~-~~~~l~~~i~~~le 107 (107)
T 1gh2_A 67 AATNNISATPTFQFFRNKVRIDQYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHHC
T ss_pred HHHCCCEEECEEEEEECCEEEEEEECC-CHHHHHHHHHHHHC
T ss_conf 998799076869999999899999793-99999999999649
No 65
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.75 E-value=7.1e-05 Score=49.44 Aligned_cols=36 Identities=17% Similarity=0.571 Sum_probs=30.3
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
.+++||+|+||+++ +|+. +.|..+.+++.+.|++.|
T Consensus 66 ~~~~~V~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~i~~~l 106 (107)
T 1dby_A 66 ASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp HHHHTCCSSCEEEEESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 75457063787999989989889878999999999999860
No 66
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxin; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium LT2} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.75 E-value=8.4e-05 Score=48.98 Aligned_cols=40 Identities=15% Similarity=0.321 Sum_probs=34.6
Q ss_pred HHHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 9998618853657998--9899---61899999999999999998
Q gi|254780477|r 189 RASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
+.++++||+++||+++ ||+. +.|..++++|.+.|+++|+.
T Consensus 82 ~la~~~~V~~~PT~i~f~~G~~v~~~~G~~~~~~l~~~I~~ll~~ 126 (142)
T 2es7_A 82 AIGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp HHHHTTTCCSSSEEEEESCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred HHHHHHCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 999980980575599999998964664989999999999998647
No 67
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.74 E-value=0.0002 Score=46.60 Aligned_cols=39 Identities=13% Similarity=0.416 Sum_probs=32.5
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 998618853657998--9899---61899999999999999998
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
.++++||+|+||+++ ||+. +.|..+.+++.+.|+..|+.
T Consensus 71 l~~~~~V~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~i~~~l~~ 114 (115)
T 1thx_A 71 TVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred HHHHCCCCEECEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 99874982328699998999999997889999999999998745
No 68
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredoxin fold, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.00015 Score=47.47 Aligned_cols=39 Identities=10% Similarity=0.341 Sum_probs=31.0
Q ss_pred HHHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998---9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
++++||.|+||+++ ||+. +.|..+.++|.+.|+..|+..
T Consensus 79 ~~~~~v~~~Pt~~~~~~~G~~v~~~~G~~~~~~l~~~l~~~l~s~ 123 (130)
T 2kuc_A 79 RKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp HHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred HHHCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 986498754759999899979988848899999999999998758
No 69
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum}
Probab=97.68 E-value=0.00021 Score=46.51 Aligned_cols=117 Identities=15% Similarity=0.248 Sum_probs=63.1
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89888899997058882064433421134432000020379984332343024577766666666532124558888886
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFN 141 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
+-..+++|+.|+...||+|....+.+....+++ .+.+ +.++.... ....
T Consensus 31 ~~~Gk~vvl~F~~~~C~~C~~~~~~l~~~~~~~-~~~~-v~~v~v~~--d~~~--------------------------- 79 (165)
T 3or5_A 31 SLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTW-ASRG-FTFVGIAV--NEQL--------------------------- 79 (165)
T ss_dssp GGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHH-TTTT-EEEEEEEC--SCCH---------------------------
T ss_pred HHCCCEEEEEEEECCCCCCCCCCCHHHHCCCCC-CCCC-EEEEECCC--CHHH---------------------------
T ss_conf 979997999999179997121270344101233-3310-15762122--1037---------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCCCH
Q ss_conf 543321134568998764311000068898640598999999999999998618853657998---9899---6189999
Q gi|254780477|r 142 KQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGDMSE 215 (232)
Q Consensus 142 ~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~~~~ 215 (232)
+.+..+.+..+.. +.......... ... .....+|++|+|+.+| ||+. +.|..+.
T Consensus 80 ------------~~~~~~~~~~~~~---~~~~~~~~~~~----~~~-~~~~~~~v~~~P~~~iId~~G~I~~~~~G~~~~ 139 (165)
T 3or5_A 80 ------------PNVKNYMKTQGII---YPVMMATPELI----RAF-NGYIDGGITGIPTSFVIDASGNVSGVIVGPRSK 139 (165)
T ss_dssp ------------HHHHHHHHHHTCC---SCEEECCHHHH----HHH-HTTSTTCSCSSSEEEEECTTSBEEEEECSCCCH
T ss_pred ------------HHHHHHHHHHCCC---CCEEECCHHHH----HHH-HHHHHCCCCCCCEEEEECCCCEEEEEEECCCCH
T ss_conf ------------9999999995998---72786188898----876-667653844246799998999799999699999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999986
Q gi|254780477|r 216 GVFSKIIDSMIQDS 229 (232)
Q Consensus 216 ~~~~~~id~ll~~~ 229 (232)
+++.++|+.+|...
T Consensus 140 ~~l~~~i~~~l~~~ 153 (165)
T 3or5_A 140 ADFDRIVKMALGAK 153 (165)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999999971887
No 70
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00074 Score=43.02 Aligned_cols=38 Identities=24% Similarity=0.467 Sum_probs=28.9
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
++++||+|+|||++ ||+. +.|. ..+++.+.|+.+....
T Consensus 69 ~~~~~I~~vPt~~~~~~G~~~~~~~G~-~~~~~~~~i~~~~~~~ 111 (112)
T 3d6i_A 69 SELFEISAVPYFIIIHKGTILKELSGA-DPKEYVSLLEDCKNSV 111 (112)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEECSC-CHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHHHHCC
T ss_conf 987598646879999899899999698-9899999999998454
No 71
>2diz_A Thioredoxin domain-containing protein 5; thioredoxin-like protein P46, endoplasmic reticulum protein ERP46, TLP46, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.66 E-value=5.8e-05 Score=49.98 Aligned_cols=37 Identities=14% Similarity=0.349 Sum_probs=29.4
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~ 227 (232)
.++++|+++||+++ ||+. +.|..+.+++.+.|.+.++
T Consensus 73 ~~~~~i~~~PT~~~~~~G~~~~~~~G~~~~~~l~~fi~~~~~ 114 (117)
T 2diz_A 73 CSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQAK 114 (117)
T ss_dssp HHHTTCCSSSEEECBBSSSBCCCCCSCCSHHHHHHHHHHHHC
T ss_pred HHHCCCEEECEEEEEECCEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 998599263969999899999999678999999999997503
No 72
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.66 E-value=0.0003 Score=45.50 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=28.1
Q ss_pred HHHCCCCCCCEEEE---CCEE-----ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998---9899-----618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNL-----YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~-----~~g~~~~~~~~~~id~ll 226 (232)
++.+||.|+||+++ ||+. +.|..+.++|.+.|++..
T Consensus 84 ~~~~~v~~~Pt~~~~~~~G~~~~~~r~~G~~~~~~f~~~L~~~~ 127 (134)
T 2fwh_A 84 LKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp HHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred HHHCCCCCCCEEEEECCCCCEEECCEECCCCCHHHHHHHHHHCC
T ss_conf 76332577788999979997962431003589999999998739
No 73
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.64 E-value=0.00012 Score=47.98 Aligned_cols=39 Identities=18% Similarity=0.442 Sum_probs=31.7
Q ss_pred HHHHCCCCCCCEEEE---CCEE--ECCCCCHHHHHHHHHHHHHH
Q ss_conf 998618853657998---9899--61899999999999999998
Q gi|254780477|r 190 ASEDFAIDSTPVFFI---GGNL--YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V---nG~~--~~g~~~~~~~~~~id~ll~~ 228 (232)
..+.+|+.++|++++ ||+. +.|..+.+++.+.|+.|++|
T Consensus 93 ~~~~~~v~~~P~~~lid~~G~i~~~~G~~~~~~l~~~l~~L~~~ 136 (136)
T 1zzo_A 93 VWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR 136 (136)
T ss_dssp HHHHTTCCSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC--
T ss_pred HHHHCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 99984999347799995998499998999999999999998686
No 74
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma brucei brucei} SCOP: c.47.1.1
Probab=97.62 E-value=0.00061 Score=43.55 Aligned_cols=38 Identities=21% Similarity=0.531 Sum_probs=30.1
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
.+.+||+++|||++ ||+. +.| .+.+.+++.|+.+|++.
T Consensus 83 ~~~~~I~~~PT~~~~~~G~~v~~~~G-~~~~~l~~~l~~~i~~~ 125 (125)
T 1r26_A 83 VSKCRVLQLPTFIIARSGKMLGHVIG-ANPGMLRQKLRDIIKDN 125 (125)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHHHC-
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEEC-CCHHHHHHHHHHHHHCC
T ss_conf 99729811486999989989999979-98799999999999609
No 75
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis}
Probab=97.60 E-value=5.6e-05 Score=50.11 Aligned_cols=39 Identities=13% Similarity=0.428 Sum_probs=31.5
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHH
Q ss_conf 998618853657998--9899---61899999999999999998
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~ 228 (232)
.++++||+|+|||++ ||+. +.|..+.+++.+.|+++|+.
T Consensus 76 l~~~~~V~~~PT~~~~~~G~~v~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 76 TARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred CCEECCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 25106831527799999998988997899999999999998620
No 76
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-fold; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.57 E-value=0.00038 Score=44.84 Aligned_cols=38 Identities=16% Similarity=0.449 Sum_probs=29.3
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
.+++||+|+|||++ ||+. +.|. ..+++...|+++|..+
T Consensus 74 ~~~~~i~~~Pt~v~~~~G~~v~~~~G~-~~~el~~~i~~~l~~a 116 (118)
T 2vm1_A 74 AEAYNVEAMPTFLFIKDGEKVDSVVGG-RKDDIHTKIVALMGSA 116 (118)
T ss_dssp HHHTTCCSBSEEEEEETTEEEEEEESC-CHHHHHHHHHHHHC--
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHHHCCC
T ss_conf 652046778889999899899999597-9999999999984567
No 77
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.56 E-value=0.00039 Score=44.76 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=27.4
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~ 227 (232)
.+++||+++|||++ ||+. +.|. ..+++.+.|++.+.
T Consensus 78 ~~~~~V~~~PT~i~fk~G~~v~r~~G~-~~~~l~~~I~k~~~ 118 (153)
T 2wz9_A 78 SEKYEISSVPTFLFFKNSQKIDRLDGA-HAPELTKKVQRHAS 118 (153)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHSC
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHHCC
T ss_conf 998499500849999999999999697-99999999998716
No 78
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.55 E-value=0.0011 Score=42.00 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=29.3
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
.+++||+++||+++ ||+. +.|..+.+++.+.+...+.+.
T Consensus 76 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~~~~~~~~~ 119 (133)
T 1x5d_A 76 ASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp HHHHTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 99859945186999989939899975899999999999976523
No 79
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis}
Probab=97.55 E-value=0.00029 Score=45.62 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=27.2
Q ss_pred CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 11689888899997058882064433421134432000
Q gi|254780477|r 59 SIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYI 96 (232)
Q Consensus 59 ~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~ 96 (232)
.+-+ ..+++|+.|+...||+|....+.+.....++..
T Consensus 29 ~l~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~ 65 (145)
T 3erw_A 29 SIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS 65 (145)
T ss_dssp EESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC
T ss_pred EEHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 7065-698899999879897099999999999864211
No 80
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, stress response; 2.60A {Homo sapiens}
Probab=97.55 E-value=0.00054 Score=43.89 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=21.9
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 888999970588820644334211344
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYL 91 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l 91 (232)
-+.++|+|..+.||||+++.++.....
T Consensus 22 ~~~~lV~FYapwC~hCk~l~p~~~~~a 48 (382)
T 2r2j_A 22 ADVALVNFYADWCRFSQMLHPIFEEAS 48 (382)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 998999998989989998899999999
No 81
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.54 E-value=0.0004 Score=44.72 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=27.5
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
.+.+||+|+||+++ ||+. +.| .+.+++++.|++..
T Consensus 71 ~~~~~v~~~Pt~~~~~~G~~v~~~~G-~~~~~l~~~i~k~~ 110 (112)
T 1ep7_A 71 AEAAGITAMPTFHVYKDGVKADDLVG-ASQDKLKALVAKHA 110 (112)
T ss_dssp HHHHTCCBSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHH
T ss_pred HHHCCCCEECEEEEEECCEEEEEEEC-CCHHHHHHHHHHHH
T ss_conf 99939923076999989999999959-69999999999863
No 82
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=97.53 E-value=0.0007 Score=43.18 Aligned_cols=113 Identities=11% Similarity=0.213 Sum_probs=61.2
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16898888999970588820644334211344320000203799843323430245777666666665321245588888
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLL 139 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 139 (232)
+-+-..+++|+.|+...||+|....+.+....+++.... +.++..... ..... . ....
T Consensus 23 l~d~~gk~~ll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~i~~d--~~~~~--~----------------~~~~ 80 (152)
T 3gl3_A 23 LSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG--FQVVAVNLD--AKTGD--A----------------MKFL 80 (152)
T ss_dssp GGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT--EEEEEEECC--SSHHH--H----------------HHHH
T ss_pred HHHHCCCEEEEEEECCCCCCHHHHCHHHHHHHHHCCCCC--EEEEECCCC--CCHHH--H----------------HHHH
T ss_conf 899589989999828989971222203555554213430--368641566--44056--6----------------7789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCC-
Q ss_conf 86543321134568998764311000068898640598999999999999998618853657998---9899---6189-
Q gi|254780477|r 140 FNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGD- 212 (232)
Q Consensus 140 ~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~- 212 (232)
...+..+ ....+. + ....+.+|+.++|+++| +|+. +.|.
T Consensus 81 ~~~~~~~---------------~~~~d~--------~-----------~~~~~~~gi~~~P~~~iiD~~G~vv~~~~G~~ 126 (152)
T 3gl3_A 81 AQVPAEF---------------TVAFDP--------K-----------GQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFR 126 (152)
T ss_dssp HHSCCCS---------------EEEECT--------T-----------CHHHHHTTCCSSSEEEEECTTSBEEEEEESCC
T ss_pred HHCCCCC---------------EEEECC--------C-----------HHHHHHCCCCCCCEEEEECCCCEEEEEEECCC
T ss_conf 8739974---------------178877--------3-----------79999839983587999979999999997989
Q ss_pred -CCHHHHHHHHHHHHHH
Q ss_conf -9999999999999998
Q gi|254780477|r 213 -MSEGVFSKIIDSMIQD 228 (232)
Q Consensus 213 -~~~~~~~~~id~ll~~ 228 (232)
.+.+.+++.|+++|.-
T Consensus 127 ~~~~~~l~~~i~~~l~g 143 (152)
T 3gl3_A 127 PADKEALEQQILAALGG 143 (152)
T ss_dssp TTTHHHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHHHCC
T ss_conf 89999999999997674
No 83
>1xwb_A Thioredoxin; dimerization, redox regulation, X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.53 E-value=0.00061 Score=43.53 Aligned_cols=30 Identities=10% Similarity=0.228 Sum_probs=23.4
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 888999970588820644334211344320
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+.+++.|....|++|+.+.+.+.+...++
T Consensus 20 ~k~vvv~f~a~wC~~Ck~~~~~~~~l~~~~ 49 (106)
T 1xwb_A 20 GKLVVLDFFATWCGPCKMISPKLVELSTQF 49 (106)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCCHHCCCCCHHHHCCCC
T ss_conf 997999998899801005685246641123
No 84
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.50 E-value=0.00045 Score=44.36 Aligned_cols=35 Identities=23% Similarity=0.548 Sum_probs=27.5
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
.+++||+|+|||++ ||+. +.|. +.++|++.|++.|
T Consensus 84 ~~~~~V~~~PT~~~~k~G~~v~~~~G~-~~~~L~~~I~k~L 123 (124)
T 1xfl_A 84 ASDWAIQAMPTFMFLKEGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHHC
T ss_conf 997499878989999899999999395-9999999999961
No 85
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.50 E-value=0.0007 Score=43.17 Aligned_cols=34 Identities=18% Similarity=0.410 Sum_probs=25.6
Q ss_pred HHHHCCCCCCCEEEE--CCEEE---CCCCCHHHHHHHHHH
Q ss_conf 998618853657998--98996---189999999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNLY---LGDMSEGVFSKIIDS 224 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~~---~g~~~~~~~~~~id~ 224 (232)
..+++||+++||+++ ||+.+ .| .+.+++++.|++
T Consensus 80 l~~~~~I~~~Pt~~~~~~G~~v~r~~G-~~~~~l~~~I~k 118 (121)
T 2j23_A 80 IAQEVGIRAMPTFVFFKNGQKIDTVVG-ADPSKLQAAITQ 118 (121)
T ss_dssp HHHHHTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHH
T ss_pred HHHHCCCEEECEEEEEECCEEEEEEEC-CCHHHHHHHHHH
T ss_conf 998729804364999989999999969-799999999997
No 86
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.50 E-value=0.00072 Score=43.08 Aligned_cols=38 Identities=26% Similarity=0.545 Sum_probs=30.1
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~ 229 (232)
.+.+||+++|||++ ||+. +.|. +.+++.+.|+.+|++.
T Consensus 92 ~~~~~I~~~PT~i~~k~G~~v~~~~G~-~~~~l~~~i~~~l~~~ 134 (139)
T 3d22_A 92 SASWEIKATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp HHHTTCCEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred HHHCCCCEECEEEEEECCEEEEEEECC-CHHHHHHHHHHHHHCC
T ss_conf 998799602969999899999999596-9999999999998137
No 87
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae tw-183}
Probab=97.48 E-value=0.0008 Score=42.80 Aligned_cols=39 Identities=10% Similarity=0.213 Sum_probs=29.5
Q ss_pred HHHHCCCCCCCEEEE---CCEEEC--CC--CCHHHHHHHHHHHHHH
Q ss_conf 998618853657998---989961--89--9999999999999998
Q gi|254780477|r 190 ASEDFAIDSTPVFFI---GGNLYL--GD--MSEGVFSKIIDSMIQD 228 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V---nG~~~~--g~--~~~~~~~~~id~ll~~ 228 (232)
..+.+||+|+||++| +|+.+. |. .+.++|.+.|+.+|+.
T Consensus 108 l~~~~~v~g~Pt~v~id~~G~~i~~~gy~~~~~~~~~~~l~~~lk~ 153 (154)
T 2ju5_A 108 LKAQYKVTGFPELVFIDAEGKQLARMGFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp HHHHTTCCSSSEEEEECTTCCEEEEECCCTTCHHHHHHHHHHHHTC
T ss_pred HHHHCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 9975332269779999899979986267459999999999998664
No 88
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, TLPA-like family, PSI-2, protein structure initiative; 1.74A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.00056 Score=43.79 Aligned_cols=39 Identities=13% Similarity=0.426 Sum_probs=31.6
Q ss_pred HHHCCCCCCCEEEE---CCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998---9899618999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNLYLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~~~g~~~~~~~~~~id~ll~~~ 229 (232)
.+.+||+++|++++ ||+.+......+++.+.|+++|+|+
T Consensus 109 ~~~y~v~~~P~~~lID~~G~Ii~~~~~~~~l~~~l~~ll~ea 150 (150)
T 3fw2_A 109 AKQYSIYKIPANILLSSDGKILAKNLRGEELKKKIENIVEEA 150 (150)
T ss_dssp HHHTTCCSSSEEEEECTTSBEEEESCCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 998498845889999899989999788899899999999559
No 89
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.47 E-value=0.00045 Score=44.38 Aligned_cols=113 Identities=8% Similarity=0.132 Sum_probs=60.7
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88889999705888206443342113443200002037998433234302457776666666653212455888888654
Q gi|254780477|r 64 DAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQ 143 (232)
Q Consensus 64 ~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q 143 (232)
..+++|+.|+.-.||+|....+.+.....++..+ ..+.++..... ........ ......
T Consensus 32 ~gk~vvl~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~--~~~~~~~~------------------~~~~~~ 90 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN-KNFAMLGISLD--IDREAWET------------------AIKKDT 90 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC-TTEEEEEEECC--SCHHHHHH------------------HHHHTT
T ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHC-CEEEEEEEECC--CCHHHHHH------------------HHHHHC
T ss_conf 9998999999999998422255489999986116-51689985258--89899999------------------999809
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEEECCCCCHHHHHH
Q ss_conf 3321134568998764311000068898640598999999999999998618853657998---9899618999999999
Q gi|254780477|r 144 DDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNLYLGDMSEGVFSK 220 (232)
Q Consensus 144 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~~~g~~~~~~~~~ 220 (232)
..+.. + .... . ......+.|||.++|+++| +|+.+......+++..
T Consensus 91 ~~~~~----------~---~~~~----------~--------~~~~~~~~y~v~~~P~~~liDk~G~Iv~~~~~g~~~~~ 139 (148)
T 3fkf_A 91 LSWDQ----------V---CDFT----------G--------LSSETAKQYAILTLPTNILLSPTGKILARDIQGEALTG 139 (148)
T ss_dssp CCSEE----------E---CCSC----------G--------GGCHHHHHTTCCSSSEEEEECTTSBEEEESCCHHHHHH
T ss_pred CCCCE----------E---EECC----------C--------HHHHHHHHCCCCCCCEEEEECCCCEEEEEECCHHHHHH
T ss_conf 99868----------8---7457----------6--------16789998698804689999899989999788178599
Q ss_pred HHHHHHHH
Q ss_conf 99999998
Q gi|254780477|r 221 IIDSMIQD 228 (232)
Q Consensus 221 ~id~ll~~ 228 (232)
.|+++|+.
T Consensus 140 ~l~~ll~~ 147 (148)
T 3fkf_A 140 KLKELLKT 147 (148)
T ss_dssp HHHHHC--
T ss_pred HHHHHHCC
T ss_conf 99999746
No 90
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=97.45 E-value=0.00013 Score=47.75 Aligned_cols=123 Identities=6% Similarity=0.016 Sum_probs=64.1
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC----CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 841168988889999705888206443342113443200002----0379984332343024577766666666532124
Q gi|254780477|r 57 DVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKT----GKLRYILREFPLDSVSTVAVMLARCAEKRMDGGY 132 (232)
Q Consensus 57 ~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 132 (232)
.+.+.+-..+++|+.|+--.||+|+...+.+....+++.... ..+.++....... . ........ ...+..
T Consensus 51 ~vsL~~~~GK~vvl~FwatwC~~C~~e~p~l~~l~~~~~~~~~~~~~~~~vi~v~~~d~-~--~~~~~~~~---~~~~~~ 124 (183)
T 3lwa_A 51 QINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-S--RDIAQDFV---TDNGLD 124 (183)
T ss_dssp EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-C--HHHHHHHH---HHTTCC
T ss_pred EEEHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC-H--HHHHHHHH---HHHCCC
T ss_conf 98699959997999999898884999989999999999874146678769997404543-0--36788899---972998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE-
Q ss_conf 558888886543321134568998764311000068898640598999999999999998618853657998---9899-
Q gi|254780477|r 133 WGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL- 208 (232)
Q Consensus 133 ~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~- 208 (232)
|. .-.+.. .... .....++++++|+.+| ||+.
T Consensus 125 ~p----------------------------~~~D~~--------~~~~--------~~~~~~~~~~iP~~~liD~~G~i~ 160 (183)
T 3lwa_A 125 YP----------------------------SIYDPP--------FMTA--------ASLGGVPASVIPTTIVLDKQHRPA 160 (183)
T ss_dssp SC----------------------------EEECTT--------CGGG--------GGTTTCCTTCCSEEEEECTTSCEE
T ss_pred CC----------------------------EEECCC--------CHHH--------HHHCCCCCCCCCEEEEECCCCEEE
T ss_conf 61----------------------------898896--------5599--------983568868317699998999899
Q ss_pred --ECCCCCHHHHHHHHHHHHHHH
Q ss_conf --618999999999999999986
Q gi|254780477|r 209 --YLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 209 --~~g~~~~~~~~~~id~ll~~~ 229 (232)
+.|..+.+++.+.|+++|+|+
T Consensus 161 ~~~~G~~~~~~l~~~i~~ll~ea 183 (183)
T 3lwa_A 161 AVFLREVTSKDVLDVALPLVDEA 183 (183)
T ss_dssp EEECSCCCHHHHHHHHHHHHHC-
T ss_pred EEEECCCCHHHHHHHHHHHHHCC
T ss_conf 99948999899999999998459
No 91
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A 1mdj_A ...
Probab=97.45 E-value=0.00062 Score=43.50 Aligned_cols=35 Identities=17% Similarity=0.438 Sum_probs=27.7
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
.+++||+|+||+++ ||+. +.|. +.+++.+.|+++|
T Consensus 66 ~~~~~V~~~Pt~~~~~~G~~v~~~~G~-~~~~l~~~i~~ll 105 (105)
T 3m9j_A 66 ASESEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp HHHTTCCBSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred HHHCCCCEEEEEEEEECCEEEEEEECC-CHHHHHHHHHHHC
T ss_conf 998799643379999999999999695-9999999999559
No 92
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.45 E-value=0.00048 Score=44.21 Aligned_cols=40 Identities=20% Similarity=0.417 Sum_probs=29.0
Q ss_pred HHHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98618853657998---9899---6189999999999999999860
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~~ 230 (232)
.+.+|+.|+|+++| ||+. ..|..+.+++.+.|+.+|++..
T Consensus 118 ~~~~~v~~~P~~~lID~~G~I~~~~~G~~~~~~~~~~i~~llekl~ 163 (168)
T 2b1k_A 118 GLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYS 163 (168)
T ss_dssp HHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHHHHH
T ss_pred HHHCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 7646898788799995999899999678998999999999999999
No 93
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.44 E-value=0.0013 Score=41.48 Aligned_cols=41 Identities=7% Similarity=-0.006 Sum_probs=30.7
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 41168988889999705888206443342113443200002
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKT 98 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~ 98 (232)
+.+-+-..+++|+.|+--.||+|....+.+....+++....
T Consensus 53 ~~L~d~~GK~vvl~F~a~~C~~C~~~~~~l~~l~~~~~~~~ 93 (186)
T 1jfu_A 53 KKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPN 93 (186)
T ss_dssp EEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTT
T ss_pred ECHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 71999699969999989968366888576653210012310
No 94
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter pomeroyi DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=97.41 E-value=0.00055 Score=43.81 Aligned_cols=40 Identities=23% Similarity=0.541 Sum_probs=32.4
Q ss_pred HHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 8618853657998---9899---61899999999999999998603
Q gi|254780477|r 192 EDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 192 ~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~~~ 231 (232)
..+++.++|++|+ +|+. +.|..+.+++.+.|+.||+++.-
T Consensus 111 ~~~~~~~~P~~~lID~~G~i~~~~~g~~~~~~l~~~i~~Ll~e~~p 156 (158)
T 3eyt_A 111 AAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEAAP 156 (158)
T ss_dssp HHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTSCCC
T ss_pred HHHCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
T ss_conf 8713367864899989999999993899999999999999742269
No 95
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.41 E-value=0.003 Score=39.16 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=28.0
Q ss_pred HHHCCCCCCCEEEE--CC----EEECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998--98----9961899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GG----NLYLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG----~~~~g~~~~~~~~~~id~ll~~ 228 (232)
.++++|+++||+++ +| ..+.|..+.+++...+...|+.
T Consensus 82 ~~~~~I~~~Pti~~f~~~~~~~~~y~G~~~~~~l~~~~~~~l~~ 125 (130)
T 2dml_A 82 GGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRS 125 (130)
T ss_dssp HHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 65549715186999989985899987899999999999986104
No 96
>2qsi_A Putative hydrogenase expression/formation protein HUPG; MCSG, PSI-2, SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris CGA009}
Probab=97.40 E-value=0.0023 Score=39.95 Aligned_cols=40 Identities=10% Similarity=0.131 Sum_probs=34.3
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999999860
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~~~~ 230 (232)
++++||.++||+++ ||+. +.|..++++|...|+.+|.+..
T Consensus 82 ~~~~~V~~~Pt~~~f~~Gk~v~~~~G~~~~~~l~~~i~~~L~~~~ 126 (137)
T 2qsi_A 82 MARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAMLAEVD 126 (137)
T ss_dssp HHHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCC
T ss_conf 997197517879999999895557378999999999999872578
No 97
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.40 E-value=0.00045 Score=44.37 Aligned_cols=33 Identities=18% Similarity=0.492 Sum_probs=25.1
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHH
Q ss_conf 98618853657998--9899---6189999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDS 224 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ 224 (232)
++++||.|+||+++ ||+. +.| .+.+++.+.|++
T Consensus 65 ~~~~~V~~~PT~~~~~~G~~v~~~~G-~~~~~l~~~i~k 102 (104)
T 2vim_A 65 AAKYSVTAMPTFVFIKDGKEVDRFSG-ANETKLRETITR 102 (104)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHH
T ss_pred HHHCCCEEECEEEEEECCEEEEEEEC-CCHHHHHHHHHH
T ss_conf 99879903467999989989999969-599999999996
No 98
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.37 E-value=0.0022 Score=40.00 Aligned_cols=38 Identities=18% Similarity=0.384 Sum_probs=30.2
Q ss_pred HHHHHCCCCCCCEEEE--CCE---EECCCCCHHHHHHHHHHHH
Q ss_conf 9998618853657998--989---9618999999999999999
Q gi|254780477|r 189 RASEDFAIDSTPVFFI--GGN---LYLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~V--nG~---~~~g~~~~~~~~~~id~ll 226 (232)
+.++++||+|+||+++ ||+ .+.|..+.+++...|-..|
T Consensus 183 ~~~~~~~V~~~Pt~~~~~~G~~~~~~~G~~~~~~~~e~l~~~~ 225 (226)
T 1a8l_A 183 EWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8999769768456999989937068768999999999999852
No 99
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein structure initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=97.33 E-value=0.00011 Score=48.13 Aligned_cols=116 Identities=15% Similarity=0.209 Sum_probs=63.6
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16898888999970588820644334211344320000203799843323430245777666666665321245588888
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLL 139 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 139 (232)
+.+-..+++|+.|+...||+|....+.+....++..... +.++...... .. .... .. +
T Consensus 23 l~~~~gk~vll~f~~~~Cp~C~~~~~~~~~l~~~~~~~~--~~~i~i~~~~--~~-~~~~----------~~-------~ 80 (154)
T 3kcm_A 23 LSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKP--FRMLCVSIDE--GG-KVAV----------EE-------F 80 (154)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCT--TH-HHHH----------HH-------H
T ss_pred HHHHCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCC--CCEEEEEEEC--CC-HHHH----------HH-------H
T ss_conf 999589979999926746752222740220002223444--3102675403--77-8999----------99-------9
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCC
Q ss_conf 865-43321134568998764311000068898640598999999999999998618853657998---9899---6189
Q gi|254780477|r 140 FNK-QDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGD 212 (232)
Q Consensus 140 ~~~-q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~ 212 (232)
.+. ...+ ....+. + ....+.+|+.++|+++| +|+. +.|.
T Consensus 81 ~~~~~~~~---------------~~~~D~--------~-----------~~~~~~~~v~~~P~~~lID~~G~I~~~~~G~ 126 (154)
T 3kcm_A 81 FRKTGFTL---------------PVLLDA--------D-----------KRVGKLYGTTGVPETFVIDRHGVILKKVVGA 126 (154)
T ss_dssp HHHHCCCC---------------CEEECT--------T-----------CHHHHHHTCCSBCEEEEECTTSBEEEEEESC
T ss_pred HHHHCCCE---------------EEEECC--------C-----------HHHHHHCCCCCCCEEEEECCCCEEEEEEECC
T ss_conf 99819956---------------787468--------5-----------2799984988168799998999999999898
Q ss_pred C--CHHHHHHHHHHHHHHHHC
Q ss_conf 9--999999999999998603
Q gi|254780477|r 213 M--SEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 213 ~--~~~~~~~~id~ll~~~~~ 231 (232)
. +.+++...|+.+|+|.++
T Consensus 127 ~~~~~~e~~~~l~~~l~k~~~ 147 (154)
T 3kcm_A 127 MEWDHPEVIAFLNNELSKARE 147 (154)
T ss_dssp CCTTSHHHHHHHHTC------
T ss_pred CCCCHHHHHHHHHHHHHHHHC
T ss_conf 999879999999999999837
No 100
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.31 E-value=0.00085 Score=42.63 Aligned_cols=116 Identities=13% Similarity=0.170 Sum_probs=60.2
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89888899997058882064433421134432000020379984332343024577766666666532124558888886
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFN 141 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
.-..+++|+.|+...||+|....+.+..+.+++......+..+ ..+.......... .... +.
T Consensus 35 ~~kgK~vvl~Fwa~wC~~C~~e~p~l~~l~~~~~~~~~~vv~v--~~~~~~~~~~~~~---------------~~~~-~~ 96 (164)
T 2h30_A 35 LKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITV--ASPGFLHEKKDGE---------------FQKW-YA 96 (164)
T ss_dssp CCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEE--ECTTSTTCCCTTH---------------HHHH-HT
T ss_pred HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE--EEECCCCHHHHHH---------------HHHH-HH
T ss_conf 8098879999998989869999999999998743540589998--6521442145788---------------8877-66
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCCCH
Q ss_conf 543321134568998764311000068898640598999999999999998618853657998---9899---6189999
Q gi|254780477|r 142 KQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGDMSE 215 (232)
Q Consensus 142 ~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~~~~ 215 (232)
... .. .+ ....+. +. ...+.+||.++|+++| +|+. +.|..+.
T Consensus 97 ~~~-~~----------~~--p~~~D~--------~~-----------~l~~~~gi~~~P~~~lid~~G~I~~~~~G~~~~ 144 (164)
T 2h30_A 97 GLN-YP----------KL--PVVTDN--------GG-----------TIAQNLNISVYPSWALIGKDGDVQRIVKGSINE 144 (164)
T ss_dssp TSC-CT----------TS--CEEECT--------TC-----------HHHHHTTCCSSSEEEEECTTSCEEEEEESCCCH
T ss_pred HHC-CC----------CC--CEECCC--------HH-----------HHHHHCCCCCCCEEEEECCCCEEEEEEECCCCH
T ss_conf 502-55----------54--142063--------36-----------799984998038899997999799999689999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780477|r 216 GVFSKIIDSMIQ 227 (232)
Q Consensus 216 ~~~~~~id~ll~ 227 (232)
++++++|+.+.+
T Consensus 145 ~~i~~~l~~~~~ 156 (164)
T 2h30_A 145 AQALALIRNPNA 156 (164)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 101
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.30 E-value=0.00058 Score=43.67 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=28.8
Q ss_pred HHHHCCCCCCCEEEE--CCEE--ECCCCCHHHHHHHHHHHHH
Q ss_conf 998618853657998--9899--6189999999999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL--YLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~--~~g~~~~~~~~~~id~ll~ 227 (232)
..+++||+++||+++ +|+. +.|..+.+++...|.....
T Consensus 69 l~~~~~V~~~Pti~~~~~g~~~~y~G~~~~~~l~~fi~~~~~ 110 (126)
T 1x5e_A 69 LSGRFIINALPTIYHCKDGEFRRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEECCSCCCHHHHHHHHHTCGG
T ss_pred HHHHCCCCEECEEEEEECCEEEEEECCCCHHHHHHHHHCCCC
T ss_conf 999869927487999989979997689999999999981547
No 102
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.30 E-value=0.0016 Score=40.88 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=25.8
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHH
Q ss_conf 998618853657998--9899---61899999999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSM 225 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~l 225 (232)
..++++|+++||+++ ||+. +.|. +.+++.+.|++.
T Consensus 83 l~~~~~V~~~Pt~~~~k~G~~v~~~~G~-~~~~l~~~i~~~ 122 (124)
T 1faa_A 83 LAKELGIRVVPTFKILKENSVVGEVTGA-KYDKLLEAIQAA 122 (124)
T ss_dssp HHHHHCCSSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHHHCCCCCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHC
T ss_conf 7987798521849999999999999495-989999999972
No 103
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.29 E-value=0.0012 Score=41.60 Aligned_cols=34 Identities=18% Similarity=0.553 Sum_probs=25.8
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSM 225 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~l 225 (232)
++++||+++||+++ ||+. +.| .+.++|.++|++.
T Consensus 72 ~~~~~I~~~PT~~~~~~G~~~~~~~G-~~~~~l~~~i~k~ 110 (113)
T 1ti3_A 72 AEEWNVEAMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp HHHHHCSSTTEEEEEETTEEEEEEEC-CCTTHHHHHHHHH
T ss_pred HHHHCCEECCEEEEEECCEEEEEECC-CCHHHHHHHHHHH
T ss_conf 98709716178999999999999869-8999999999987
No 104
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.00075 Score=42.96 Aligned_cols=29 Identities=21% Similarity=0.311 Sum_probs=22.8
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88999970588820644334211344320
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+++|+|.-..|+||+++.|+..+...++
T Consensus 36 ~~~lV~Fya~wC~~Ck~l~P~~e~~a~~~ 64 (298)
T 3ed3_A 36 YTSLVEFYAPWCGHCKKLSSTFRKAAKRL 64 (298)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 83999997999989998999999999980
No 105
>3f8u_A Protein disulfide-isomerase A3ERP57; alternative splicing, endoplasmic reticulum, glycoprotein, immunoglobulin domain, membrane, microsome, protein disulfide isomerase; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.24 E-value=0.0016 Score=40.82 Aligned_cols=36 Identities=14% Similarity=0.076 Sum_probs=27.4
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 411689888899997058882064433421134432
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~ 93 (232)
.+..++.+++.+|.|..+.|+||+++.++.....++
T Consensus 14 ~i~~~~~~~~~~V~FYapwC~~Ck~~~p~~~~~a~~ 49 (481)
T 3f8u_A 14 RISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATR 49 (481)
T ss_dssp HTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 998458997599999899997899889999999998
No 106
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.23 E-value=0.0014 Score=41.24 Aligned_cols=34 Identities=18% Similarity=0.491 Sum_probs=26.0
Q ss_pred HHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 8618853657998--9899---618999999999999999
Q gi|254780477|r 192 EDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 192 ~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
+++||.|+|||++ ||+. +.|. ..+++.+.|++..
T Consensus 81 ~~~~V~~~Pt~~~~k~G~~v~~~~G~-~~~~l~~~i~~h~ 119 (122)
T 2vlu_A 81 EQFSVEAMPTFLFMKEGDVKDRVVGA-IKEELTAKVGLHA 119 (122)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEEEEECCEEEEEEECC-CHHHHHHHHHHHH
T ss_conf 66596163379999899899999488-9899999999986
No 107
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.21 E-value=0.0042 Score=38.27 Aligned_cols=113 Identities=10% Similarity=0.204 Sum_probs=60.0
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16898888999970588820644334211344320000203799843323430245777666666665321245588888
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLL 139 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 139 (232)
+.+-..+++|+.|+.-.||+|....+.+....++.... + +.++...... ... . ....+
T Consensus 21 l~~~~gk~~li~f~~~~C~~C~~~~~~l~~~~~~~~~~-~-~~vv~i~~d~--~~~---~---------------~~~~~ 78 (151)
T 2f9s_A 21 LSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ-G-VEIVAVNVGE--SKI---A---------------VHNFM 78 (151)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-T-EEEEEEEESC--CHH---H---------------HHHHH
T ss_pred HHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCC-C-CCCCCCCCCC--CHH---H---------------HHHHH
T ss_conf 99979996999999999998756770577888875324-7-5312554789--999---9---------------99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCC
Q ss_conf 86543321134568998764311000068898640598999999999999998618853657998---9899---61899
Q gi|254780477|r 140 FNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGDM 213 (232)
Q Consensus 140 ~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~~ 213 (232)
-.....+ ....+. + ....+.+|++++|+++| ||+. +.|..
T Consensus 79 ~~~~~~~---------------~~~~d~--------~-----------~~~~~~~~i~~~P~~~liD~~G~i~~~~~G~~ 124 (151)
T 2f9s_A 79 KSYGVNF---------------PVVLDT--------D-----------RQVLDAYDVSPLPTTFLINPEGKVVKVVTGTM 124 (151)
T ss_dssp HHHTCCS---------------CEEEET--------T-----------SHHHHHTTCCSSCEEEEECTTSEEEEEEESCC
T ss_pred HHCCCCC---------------CCCCCC--------C-----------HHHHHHCCCCEEEEEEEECCCCEEEEEEECCC
T ss_conf 9819985---------------544586--------3-----------77898739758989999979998999996999
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9999999999999986
Q gi|254780477|r 214 SEGVFSKIIDSMIQDS 229 (232)
Q Consensus 214 ~~~~~~~~id~ll~~~ 229 (232)
+.+.++++++. |++.
T Consensus 125 ~~~~~~~il~~-lk~~ 139 (151)
T 2f9s_A 125 TESMIHDYMNL-IKPG 139 (151)
T ss_dssp CHHHHHHHHHH-HSCC
T ss_pred CHHHHHHHHHH-HHHH
T ss_conf 99999999999-9887
No 108
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii atcc 33406}
Probab=97.19 E-value=0.00094 Score=42.35 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=27.7
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 168988889999705888206443342113443200
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKY 95 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~ 95 (232)
+-+-.++++|+.|+...||+|....+.+.....++-
T Consensus 26 l~~~~gk~~vv~f~a~~C~~C~~~~~~l~~~~~~~~ 61 (148)
T 3hcz_A 26 LYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNR 61 (148)
T ss_dssp GGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHG
T ss_pred HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999399989999989837277999899999999851
No 109
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.18 E-value=0.00055 Score=43.82 Aligned_cols=36 Identities=8% Similarity=0.244 Sum_probs=26.9
Q ss_pred HHHCCCCCCCEEEE--CCE-----EECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--989-----9618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGN-----LYLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~-----~~~g~~~~~~~~~~id~ll 226 (232)
.++++|+|+||+++ ||+ .+.|..+.+++.+.|++.+
T Consensus 74 ~~~~~i~~~Pt~~~~~~G~~~~~~~~~g~~~~~~l~~fi~~~~ 116 (120)
T 1mek_A 74 AQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp HHHHTCCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred HHHCCCEEECEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 9987980727799998999965379607899999999999867
No 110
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.17 E-value=0.0013 Score=41.50 Aligned_cols=143 Identities=10% Similarity=0.015 Sum_probs=66.7
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41168988889999705888206443342113443200002037998433234302457776666666653212455888
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVS 137 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 137 (232)
+.+.+=..+++++.|.--.||+|+...+.+.+..+++..+...+..+................. .+..
T Consensus 41 v~Lsd~kGKvvli~f~as~C~~c~~~~~~l~~l~~~y~~~g~~vv~i~~~~~~~~~~~~~~ei~------------~~~~ 108 (190)
T 2vup_A 41 YNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIK------------EFVC 108 (190)
T ss_dssp CCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHH------------HHHH
T ss_pred ECHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHH------------HHHH
T ss_conf 6489929988999997158998477799999999986115763563012200246889899999------------9987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCE-EEE--CCEE---ECC
Q ss_conf 8886543321134568998764311000068898640598999999999999998618853657-998--9899---618
Q gi|254780477|r 138 LLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPV-FFI--GGNL---YLG 211 (232)
Q Consensus 138 ~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt-~~V--nG~~---~~g 211 (232)
..+....... ......|.. .......+..+.........+...|| |+| +|+. +.+
T Consensus 109 ~~~~~~~~~~----------~~~~~~g~~---------~~~~~~~l~~~~~~~~~~~~i~~n~t~fLIDkdG~Vv~~~~~ 169 (190)
T 2vup_A 109 TKFKAEFPIM----------AKINVNGEN---------AHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSP 169 (190)
T ss_dssp HHHCCCSCBB----------CCCBSSSTT---------BCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECT
T ss_pred HCCCCCCCEE----------EEEEECCCC---------CCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECC
T ss_conf 4157532023----------568742632---------477888898755897657766548879999799848988699
Q ss_pred CCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999998603
Q gi|254780477|r 212 DMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 212 ~~~~~~~~~~id~ll~~~~~ 231 (232)
..+.+++.+.|++||+++++
T Consensus 170 ~~~~~~l~~~I~~lLk~~~~ 189 (190)
T 2vup_A 170 GASVKDIEKKLIPLLESTQS 189 (190)
T ss_dssp TCCHHHHHHHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHHHC
T ss_conf 99969999999999998750
No 111
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.15 E-value=0.002 Score=40.30 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=25.7
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSM 225 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~l 225 (232)
.+++||+++|||++ ||+. +.|. +.+++.+.|+++
T Consensus 71 ~~~~~V~~~Pt~~~~~~G~~v~~~~G~-~~~~l~~~i~~~ 109 (111)
T 2pu9_C 71 AKELGIRVVPTFKILKENSVVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp HHHHCCSBSSEEEEESSSSEEEEEESS-CHHHHHHHHHHH
T ss_pred HHHCCCCEECEEEEEECCEEEEEEECC-CHHHHHHHHHHC
T ss_conf 999699313859999899999999594-989999999970
No 112
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum 3D7} SCOP: c.47.1.1
Probab=97.15 E-value=0.0015 Score=41.09 Aligned_cols=34 Identities=26% Similarity=0.532 Sum_probs=26.1
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHH
Q ss_conf 98618853657998--9899---61899999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSM 225 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~l 225 (232)
.+.+||+++||+++ ||+. +.| .+.+++++.|++.
T Consensus 72 ~~~~~V~~~PTi~~~k~G~~v~~~~G-~~~~~l~~~i~k~ 110 (112)
T 1syr_A 72 TEKENITSMPTFKVYKNGSSVDTLLG-ANDSALKQLIEKY 110 (112)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHTT
T ss_pred HHHCCCEEECEEEEEECCEEEEEEEC-CCHHHHHHHHHHH
T ss_conf 99869918466999989999999949-2989999999984
No 113
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=97.14 E-value=0.00097 Score=42.28 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=23.5
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8988889999705888206443342113443
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLE 92 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~ 92 (232)
+-..+++|+.|+-..||+|....+.+....+
T Consensus 55 d~kGK~vvl~FwatwC~~C~~e~p~l~~l~~ 85 (176)
T 3kh7_A 55 DLKGKPALVNVWGTWCPSCRVEHPELTRLAE 85 (176)
T ss_dssp GGCSSCEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 9799989999868889962788799999987
No 114
>3f9u_A Putative exported cytochrome C biogenesis- related protein; structural genomics, PSI-2, protein structure initiative; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.12 E-value=0.00053 Score=43.91 Aligned_cols=41 Identities=10% Similarity=0.308 Sum_probs=32.4
Q ss_pred HHHCCCCCCCEEEE---CCEEE---CCC-CCHHHHHHHHHHHHHHHHC
Q ss_conf 98618853657998---98996---189-9999999999999998603
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNLY---LGD-MSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~~---~g~-~~~~~~~~~id~ll~~~~~ 231 (232)
.+++||+|+||++| ||+.+ .|. .+.+.|...|+..|++-+|
T Consensus 123 ~~~y~v~g~Pt~v~id~~Gkii~~~~G~~~~~~~f~~~L~~~l~~~~~ 170 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENYRK 170 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 997388886569999999989505557888999999999999999850
No 115
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A
Probab=97.05 E-value=0.0028 Score=39.39 Aligned_cols=34 Identities=12% Similarity=0.378 Sum_probs=24.8
Q ss_pred HHHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHH
Q ss_conf 998618853657998--9899---6189999999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDS 224 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ 224 (232)
..+++||+|+||+++ ||+. +.|. +.+++++.|++
T Consensus 69 l~~~~~V~~~Pt~i~~~~G~~v~~~~G~-~~~~l~~~I~~ 107 (109)
T 3f3q_A 69 VAQKNEVSAMPTLLLFKNGKEVAKVVGA-NPAAIKQAIAA 107 (109)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHH
T ss_pred HHHHCCCCEECEEEEEECCEEEEEEECC-CHHHHHHHHHC
T ss_conf 9998599163879999899899999799-99999999983
No 116
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus HB8} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=97.03 E-value=0.00042 Score=44.55 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=29.0
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 41168988889999705888206443342113443200002
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKT 98 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~ 98 (232)
+.+.+-..+++|+.|+.-.||+|++..+.+.+..++ +.+.
T Consensus 26 ~~Lsd~~gk~vvl~FwatwCp~c~~~~p~l~~l~~~-y~~~ 65 (188)
T 2cvb_A 26 YRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAER-YRGK 65 (188)
T ss_dssp EEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHH-TTTT
T ss_pred EEHHHHCCCEEEEEEECCCCCCHHHHHHHCCCHHHH-CCCE
T ss_conf 878996999599999898997427876412200111-0430
No 117
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidoreductase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.03 E-value=0.00021 Score=46.47 Aligned_cols=142 Identities=9% Similarity=-0.005 Sum_probs=68.4
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41168988889999705888206443342113443200002037998433234302457776666666653212455888
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVS 137 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 137 (232)
+.+.+=..+++++.|.--.||+|....+.+....+++ .+.+...+.+...................... .+. ...
T Consensus 39 ~~L~~~kGKvvli~f~as~C~~c~~~~~~l~~l~~~y-~~~~~~v~~~~~~~~~~~e~~~~~ei~~~~~~---~~~-~~~ 113 (187)
T 3dwv_A 39 YNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKY-KSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCT---KFK-AEF 113 (187)
T ss_dssp CCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHH-GGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCB---CCC-CSS
T ss_pred ECHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH---CCC-CCC
T ss_conf 6389939988999996788978488899999999985-01453122012333323564339999999875---146-542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCE-EEE--CCEE---ECC
Q ss_conf 8886543321134568998764311000068898640598999999999999998618853657-998--9899---618
Q gi|254780477|r 138 LLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPV-FFI--GGNL---YLG 211 (232)
Q Consensus 138 ~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt-~~V--nG~~---~~g 211 (232)
..+.. ....|... ......+..........++|.++|+ |+| ||+. +.+
T Consensus 114 ~~~~~-----------------~~~~g~~~---------~~~~~~l~~~~~~~~~~~~i~~~p~~fLIDk~Gkiv~r~~~ 167 (187)
T 3dwv_A 114 PIMAK-----------------INVNGENA---------HPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSP 167 (187)
T ss_dssp CBBCC-----------------BCCSCC-C---------CHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECT
T ss_pred EEEEE-----------------EECCCCCC---------CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECC
T ss_conf 02455-----------------53057545---------77899998727887324323448859999699978988699
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999860
Q gi|254780477|r 212 DMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 212 ~~~~~~~~~~id~ll~~~~ 230 (232)
..+++++.+.|++||+++|
T Consensus 168 ~~~~~~i~~~I~~lL~~~k 186 (187)
T 3dwv_A 168 GASVKDIEEKLIPLLGSAR 186 (187)
T ss_dssp TCCHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHHHHCC
T ss_conf 9998999999999997653
No 118
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.02 E-value=0.0034 Score=38.81 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=26.2
Q ss_pred CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 116898888999970588820644334211344320
Q gi|254780477|r 59 SIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 59 ~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+-+-..+++|+.|+...||+|....+.+.....++
T Consensus 31 ~l~d~~Gk~vvl~f~~~~C~~C~~~~~~l~~l~~~~ 66 (165)
T 3ha9_A 31 SLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKY 66 (165)
T ss_dssp CGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHC
T ss_pred EHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 099969997999998999988546313268899861
No 119
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.98 E-value=0.00089 Score=42.51 Aligned_cols=30 Identities=10% Similarity=0.156 Sum_probs=21.3
Q ss_pred CCEEEEEEEC-------CCCCCHHHHHHHHHHHHHHH
Q ss_conf 8889999705-------88820644334211344320
Q gi|254780477|r 65 APVTMVEYAS-------MTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 65 A~v~ivef~D-------~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+..++.|.. ..||+|+.+.+.+.....++
T Consensus 24 ~k~v~v~F~a~~~~~g~~WC~~Ck~~~p~~~~~~~~~ 60 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHI 60 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 9879999954678889988975356578999999860
No 120
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.98 E-value=0.0016 Score=40.88 Aligned_cols=35 Identities=23% Similarity=0.489 Sum_probs=26.4
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
+++++|+|+||+++ ||+. +.|. +.+.+++.|+++|
T Consensus 78 ~~~~~V~~~Pt~~~~~~G~~v~~~~G~-~~~~l~~~i~~~l 117 (117)
T 2xc2_A 78 ARKYNISAMPTFIAIKNGEKVGDVVGA-SIAKVEDMIKKFI 117 (117)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEECC-CHHHHHHHHHHHC
T ss_conf 998799287669999999999999598-9899999999769
No 121
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.97 E-value=0.0016 Score=40.81 Aligned_cols=33 Identities=21% Similarity=0.510 Sum_probs=24.5
Q ss_pred HHHCCCCCCCEEEE--CCEEE---CCCCCHHHHHHHHHH
Q ss_conf 98618853657998--98996---189999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNLY---LGDMSEGVFSKIIDS 224 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~~---~g~~~~~~~~~~id~ 224 (232)
.+++||+++||+++ ||+.+ .|. +.+++++.|++
T Consensus 76 ~~~~~I~~~Pt~~~fk~Gk~v~~~~G~-~~~~L~~~ike 113 (114)
T 2oe3_A 76 AKECEVTAMPTFVLGKDGQLIGKIIGA-NPTALEKGIKD 113 (114)
T ss_dssp HHHTTCCSBSEEEEEETTEEEEEEESS-CHHHHHHHHHT
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEECC-CHHHHHHHHHC
T ss_conf 541353473189999899999999698-98999999971
No 122
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.95 E-value=0.006 Score=37.28 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=27.1
Q ss_pred HHHHHCCCCCCCEEEE--CCEE--ECCCCCHHHHHHHHHH
Q ss_conf 9998618853657998--9899--6189999999999999
Q gi|254780477|r 189 RASEDFAIDSTPVFFI--GGNL--YLGDMSEGVFSKIIDS 224 (232)
Q Consensus 189 ~~~~~~gi~gTPt~~V--nG~~--~~g~~~~~~~~~~id~ 224 (232)
..++++||++.||+++ ||+. +.|..+.+++.+.|++
T Consensus 195 ~l~~~~~I~~~Ptl~~f~~g~~~~y~G~~~~~~l~~fi~~ 234 (241)
T 3idv_A 195 DLAKRFDVSGYPTLKIFRKGRPYDYNGPREKYGIVDYMIE 234 (241)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEECCSCCSHHHHHHHHHH
T ss_pred HHHHHCCCCEECEEEEEECCEEEEEECCCCHHHHHHHHHH
T ss_conf 9999879966477999999999995689999999999998
No 123
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=96.92 E-value=0.0032 Score=38.95 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=28.0
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 41168988889999705888206443342113443200
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKY 95 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~ 95 (232)
+.+-+-..+++|+.|+...||+|....+.+.....++.
T Consensus 34 ~~l~~~~gk~~vl~f~~~~C~~C~~~~~~l~~~~~~~~ 71 (158)
T 3hdc_A 34 KSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFP 71 (158)
T ss_dssp EESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSS
T ss_pred EEHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCC
T ss_conf 80999699979999989889740442621101110011
No 124
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA; 1.60A {Geobacillus kaustophilus HTA426}
Probab=96.92 E-value=0.0014 Score=41.18 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=27.3
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 88899997058882064433421134432000020
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTG 99 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~ 99 (232)
.+++|+.|..-.||+|....+.+.+..+++-.+..
T Consensus 46 kk~vvl~FwatwCp~C~~e~p~l~~l~~~~~~~~~ 80 (196)
T 2ywi_A 46 DAATVIMFICNHCPFVKHVQHELVRLANDYMPKGV 80 (196)
T ss_dssp SSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88799999389882489999999999999750794
No 125
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.90 E-value=0.0079 Score=36.50 Aligned_cols=28 Identities=21% Similarity=0.356 Sum_probs=21.8
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8899997058882064433421134432
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~ 93 (232)
+..+|.|....||+|+++.+.+.+....
T Consensus 33 ~~~~V~Fy~~wC~~C~~~~p~~~~la~~ 60 (241)
T 3idv_A 33 DTVLLEFYAPWCGHCKQFAPEYEKIANI 60 (241)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 9899999899998999999999999987
No 126
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.76A {Thermus thermophilus HB27}
Probab=96.90 E-value=0.0011 Score=41.87 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=24.9
Q ss_pred HHHHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 998618853657998---9899---618999999999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 190 ~~~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll 226 (232)
..+.+|+.++|+++| ||+. +.|..+.+++...|..++
T Consensus 101 ~~~~~~v~~~P~~~iiD~~G~I~~~~~G~~~~~~l~~~ll~~~ 143 (154)
T 3ia1_A 101 VAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp HHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred HHHHCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8998598806889999899989999958999999999999987
No 127
>1x5c_A Protein disulfide-isomerase; DSI, ERBA2L, GIT, PDI, PDIA1, PO4DB, PO4HB, prohb, thioredoxin like domain, redox, structural genomics; NMR {Homo sapiens}
Probab=96.86 E-value=0.011 Score=35.57 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=26.7
Q ss_pred HHCCCCCCCEEEE--CC-----EEECCCCCHHHHHHHHHHHHH
Q ss_conf 8618853657998--98-----996189999999999999999
Q gi|254780477|r 192 EDFAIDSTPVFFI--GG-----NLYLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 192 ~~~gi~gTPt~~V--nG-----~~~~g~~~~~~~~~~id~ll~ 227 (232)
++++|+|+||+++ +| ..+.|..+.++|.+.|+...+
T Consensus 73 ~~~~I~~~Pti~~f~~~~~~~~~~~~g~~~~~~l~~fi~~~~~ 115 (121)
T 1x5c_A 73 EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQ 115 (121)
T ss_dssp TTBCCCSSSEEEEECSCSSCCCEECCSCCSHHHHHHHHHHTSC
T ss_pred HHCCCEEECEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCC
T ss_conf 6549507257999989983046783189999999999996687
No 128
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=96.78 E-value=0.0013 Score=41.42 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=30.6
Q ss_pred HHHCCCCCCCEEEE---CCEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998---989961899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNLYLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~~~g~~~~~~~~~~id~ll~~ 228 (232)
.+.++++++|++|+ +|+.+-...+.++++..|.+++.|
T Consensus 102 ~~~y~v~~~P~~~liD~~G~Ii~~~~~~~~le~~L~~~~~k 142 (142)
T 3ewl_A 102 RQLYDIRATPTIYLLDGRKRVILKDTSMEQLIDYLATQAGK 142 (142)
T ss_dssp TTCSCCCSSSEEEEECTTCBEEECSCCHHHHHHHHHC----
T ss_pred HHHEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCC
T ss_conf 55405324414999979998998409989999999998586
No 129
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.76 E-value=0.0038 Score=38.51 Aligned_cols=37 Identities=16% Similarity=0.330 Sum_probs=28.1
Q ss_pred HHHCCCCCCCEEEE---CCE--EE---CCCCCHHHHHHHHHHHHH
Q ss_conf 98618853657998---989--96---189999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGN--LY---LGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~--~~---~g~~~~~~~~~~id~ll~ 227 (232)
.+.+|+.++|++++ ||+ .+ .|..+.+++++.|++|+.
T Consensus 92 ~~~~~v~~~P~~~~id~~G~i~~v~~~~g~~~~~~l~~~l~~L~a 136 (136)
T 1lu4_A 92 WARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS 136 (136)
T ss_dssp HHHTTCCSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC--
T ss_pred HHHCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 998399844579999699719998424788999999999998529
No 130
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.71 E-value=0.00084 Score=42.65 Aligned_cols=41 Identities=20% Similarity=0.281 Sum_probs=34.7
Q ss_pred HHHCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 98618853657998989961899999999999999998603
Q gi|254780477|r 191 SEDFAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 191 ~~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~id~ll~~~~~ 231 (232)
.+.+||+|.||+++||+.+.|..+.++|.+++.--+++.|.
T Consensus 59 ~~~~~I~g~PTi~~~g~~y~G~r~~e~L~e~sG~~~~~~~~ 99 (106)
T 3kp8_A 59 CTEAGITSYPTWIINGRTYTGVRSLEALAVASGYPLEEGRL 99 (106)
T ss_dssp HHHTTCCSSSEEEETTEEEESCCCHHHHHHHHTCCC-----
T ss_pred HHCCCCCCCCEEEECCEEEECCCCHHHHHHHHCCCCCCCCC
T ss_conf 43175430272999998855678999999998899643431
No 131
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.70 E-value=0.00092 Score=42.43 Aligned_cols=38 Identities=18% Similarity=0.401 Sum_probs=27.2
Q ss_pred HHHCCCCCCCEEEE--CCEE------ECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998--9899------61899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL------YLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~------~~g~~~~~~~~~~id~ll~~ 228 (232)
.++++|+++||+++ ||+. +.|..+.+.|...|++.+.+
T Consensus 74 ~~~~~I~~~Pti~~f~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 119 (133)
T 2dj3_A 74 NDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp CSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred HHHCCCCEECEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 9987995438499998990845575047887999999999970665
No 132
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.48 E-value=0.0088 Score=36.21 Aligned_cols=25 Identities=12% Similarity=0.259 Sum_probs=19.5
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8899997058882064433421134
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKY 90 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~ 90 (232)
+.+|+.|+...|++|+.+.+.+.+.
T Consensus 24 ~~vvv~F~A~WC~~Ck~~~p~~~~l 48 (118)
T 2f51_A 24 GLVLVDFFATWCGPCQRLGQILPSI 48 (118)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 9199999889898999856999975
No 133
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.44 E-value=0.00049 Score=44.15 Aligned_cols=35 Identities=17% Similarity=0.439 Sum_probs=25.9
Q ss_pred HHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHHH
Q ss_conf 8618853657998--9899---6189999999999999999
Q gi|254780477|r 192 EDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 192 ~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll~ 227 (232)
+++||+|+|||++ ||+. +.|. ..+++++.|++.+.
T Consensus 83 ~~~~I~~~PT~~~~~~G~~v~~~~G~-~~~~l~~~i~k~~~ 122 (130)
T 1wmj_A 83 EKYNVEAMPTFLFIKDGAEADKVVGA-RKDDLQNTIVKHVG 122 (130)
T ss_dssp HHHTCCSSCCCCBCTTTTCCBCCCTT-CTTTHHHHHHHHTS
T ss_pred HHCCCCCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHHCC
T ss_conf 41241666879999899999999596-99999999999739
No 134
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein structure initiative; HET: MSE; 1.30A {Bacteroides fragilis nctc 9343}
Probab=96.39 E-value=0.007 Score=36.83 Aligned_cols=33 Identities=21% Similarity=0.169 Sum_probs=25.2
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 411689888899997058882064433421134
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKY 90 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~ 90 (232)
+.+.+-..+.+|+.|+...||+|....+.+...
T Consensus 24 ~~l~~~~gk~vvl~f~~~~C~~C~~~~~~l~~~ 56 (142)
T 3eur_A 24 GTLYQFPAEYTLLFINNPGCHACAEMIEGLKAS 56 (142)
T ss_dssp EETTTCCCSEEEEEECCSSSHHHHHHHHHHHHC
T ss_pred EEHHHHCCCEEEEEEECCCCCCCCEEEHHHHHH
T ss_conf 878993998299998267899763230216877
No 135
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thioredoxin reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.39 E-value=0.018 Score=34.18 Aligned_cols=155 Identities=13% Similarity=0.165 Sum_probs=69.2
Q ss_pred CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH------HHHHHHHHHHHHHHHHHHHH
Q ss_conf 689888899997058882064433421134432000020379984332343024------57776666666653212455
Q gi|254780477|r 61 GQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVS------TVAVMLARCAEKRMDGGYWG 134 (232)
Q Consensus 61 G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~~~~~~~~~ 134 (232)
.+-..||+++.|.| .|+.|..+.. +...+.+. ..++.+........... ............-....|..
T Consensus 15 ~~~~~~v~l~~~~~-~~~~~~~~~~-~~~~~~~~---~~~i~~~~~~~~~~~~p~~~~~~~~~~~~i~f~g~p~g~Ef~s 89 (521)
T 1hyu_A 15 EKLTKPVELIATLD-DSAKSAEIKE-LLAEIAEL---SDKVTFKEDNTLPVRKPSFLITNPGSQQGPRFAGSPLGHEFTS 89 (521)
T ss_dssp TTCCSCEEEEEECC-SSHHHHHHHH-HHHHHHTT---CTTEEEEECTTSSSCSSEEEEECTTCCCSCEEESCCCGGGHHH
T ss_pred HHCCCCEEEEEECC-CCHHHHHHHH-HHHHHHHH---CCCEEEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHH
T ss_conf 85899889999848-9754899999-99999974---7976999747876668629993599743069961687355799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHCCHHHHHHHHH----------------HHHHHHHHC
Q ss_conf 888888654332113456899876431100----006889864059899999999----------------999999861
Q gi|254780477|r 135 FVSLLFNKQDDWINSKNYRDALLNMAKFAG----FSKNDFDTCLNDQNILDDIKA----------------GKKRASEDF 194 (232)
Q Consensus 135 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g----~~~~~~~~~~~~~~~~~~i~~----------------~~~~~~~~~ 194 (232)
+...++..-. +....++...+..++.. +...---.|-.=+.....+.. ...+.++.+
T Consensus 90 ~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~vs~~C~~Cp~~v~~~~~~a~~n~~i~~~~i~~~~~~~~~~~~ 166 (521)
T 1hyu_A 90 LVLALLWTGG---HPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITER 166 (521)
T ss_dssp HHHHHHHHTT---CCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHT
T ss_pred HHHHHHHHCC---CCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHCHHHHHHH
T ss_conf 9999998559---9889899999999727887279999668999977999999999863997169999830177889864
Q ss_pred CCCCCCEEEECCEEE-CCCCCHHHHHHHHH
Q ss_conf 885365799898996-18999999999999
Q gi|254780477|r 195 AIDSTPVFFIGGNLY-LGDMSEGVFSKIID 223 (232)
Q Consensus 195 gi~gTPt~~VnG~~~-~g~~~~~~~~~~id 223 (232)
+|.|+|+++|||+.+ .|..+.+++...++
T Consensus 167 ~~~~vp~~~~~~~~~~~g~~~~~~~~~~~~ 196 (521)
T 1hyu_A 167 NVMGVPAVFVNGKEFGQGRMTLTEIVAKVD 196 (521)
T ss_dssp TCCSSSEEEETTEEEEESCCCHHHHHHHHC
T ss_pred CCCCCCEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 867578064278401135112999976532
No 136
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, cytoplasm, oxidoreductase, peroxidase, redox-active center; 2.02A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.002 Score=40.29 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=30.2
Q ss_pred HHCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8618853657998---9899---6189999999999999999860
Q gi|254780477|r 192 EDFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 192 ~~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~~ 230 (232)
..++|.++|+.|| ||+. +.|..+++++.+.|+.||+|.+
T Consensus 127 ~~~~i~~~p~~fLID~~G~iv~~~~~~~~~~~l~~~I~~lL~ei~ 171 (171)
T 3cmi_A 127 GLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKEVE 171 (171)
T ss_dssp SCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHTCC-
T ss_pred CCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf 235424555399998999699997999999999999999997219
No 137
>3cyn_A Probable glutathione peroxidase 8; thioredoxin fold, membrane, oxidoreductase, transmembrane, structural genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.32 E-value=0.015 Score=34.78 Aligned_cols=48 Identities=10% Similarity=-0.055 Sum_probs=32.9
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 411689888899997058882064433421134432000020379984
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYIL 105 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~ 105 (232)
+.+-+=..+++++.|.--.||.|....+.+.+...++......+..+.
T Consensus 40 vsLsdfkGKvvlv~f~aT~Cp~c~~~~~~l~~~~~~~~~~~~~~~~~~ 87 (189)
T 3cyn_A 40 VSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP 87 (189)
T ss_dssp EEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred ECHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCC
T ss_conf 518992998899999715899840020999999987513314540223
No 138
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=96.31 E-value=0.019 Score=34.08 Aligned_cols=48 Identities=17% Similarity=0.340 Sum_probs=31.6
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 4116898888999970588820644334211344320000203799843
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILR 106 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~ 106 (232)
+.+.+-..+++++.|+-..||+|....+.+.+..+++..+. .+.++..
T Consensus 21 vsl~~l~GK~vvl~FwatwC~~C~~e~p~l~~l~~k~~~~~-~~~vv~i 68 (144)
T 1o73_A 21 VSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAK-NFEVVLI 68 (144)
T ss_dssp BCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-TEEEEEE
T ss_pred EEHHHHCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHCCCC-CEEEEEE
T ss_conf 96999099879999997888556654866999998740146-6489986
No 139
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A
Probab=96.24 E-value=0.023 Score=33.61 Aligned_cols=38 Identities=13% Similarity=0.214 Sum_probs=24.3
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHH--HHHHHHHHH
Q ss_conf 86188536579989899618999999999--999999986
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSK--IIDSMIQDS 229 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~--~id~ll~~~ 229 (232)
+..|.+..|.+||||+.+-|.-....+.+ -++.+|++.
T Consensus 76 ~~~g~~tvPqVfI~Gk~IGG~del~~l~~~G~L~~lLk~~ 115 (118)
T 3c1r_A 76 EINGQRTVPNIYINGKHIGGNDDLQELRETGELEELLEPI 115 (118)
T ss_dssp HHHSCCSSCEEEETTEEEESHHHHHHHHHHTHHHHHHHHH
T ss_pred HHCCCCCCCEEEECCEEEECHHHHHHHHHCCCHHHHHHHH
T ss_conf 8459998997999997981679999999879999999986
No 140
>3cxg_A Putative thioredoxin; malaria, structural genomics, oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum 3D7}
Probab=96.22 E-value=0.0094 Score=36.03 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=24.3
Q ss_pred HHHCCCCCCCEEEE--CCE-------EECCCCCHHHHHHHHHHH
Q ss_conf 98618853657998--989-------961899999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGN-------LYLGDMSEGVFSKIIDSM 225 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~-------~~~g~~~~~~~~~~id~l 225 (232)
.+.+||+++|||++ ||+ .+.|. +.+++.++|++.
T Consensus 85 ~~~~~V~~iPT~~~f~~g~~~~~~v~~i~G~-~~~~l~~~i~k~ 127 (133)
T 3cxg_A 85 NDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp HHHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHCCCEECCEEEEEECCCCCCEEEEEEECC-CHHHHHHHHHHH
T ss_conf 9987991225799998994831686789188-999999999997
No 141
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=96.02 E-value=0.016 Score=34.52 Aligned_cols=39 Identities=15% Similarity=0.286 Sum_probs=30.7
Q ss_pred HCCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 618853657998---9899---61899999999999999998603
Q gi|254780477|r 193 DFAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 193 ~~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~~~ 231 (232)
.+.+..+|+++| ||+. +.+..+.+++.+.|.++|++-++
T Consensus 124 ~~~i~H~~~~~LID~~G~i~~~~~~~~~~~~i~~~i~~lLa~~~~ 168 (171)
T 2rli_A 124 DYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAAFRS 168 (171)
T ss_dssp CCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 406621206999979984999979999999999999999998787
No 142
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GTT; 1.50A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.02 Score=33.93 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=24.9
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHHH
Q ss_conf 61885365799898996189999999999-----999999860
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDST 230 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~~ 230 (232)
..|...+|.+||||+.+-| ++++.++ +.++|++..
T Consensus 65 ~t~~~tvPqIFI~Gk~IGG---~~dl~~l~~~G~L~~~L~~~g 104 (127)
T 3l4n_A 65 VTGRGTVPNLLVNGVSRGG---NEEIKKLHTQGKLLESLQVWS 104 (127)
T ss_dssp HHSCCSSCEEEETTEECCC---HHHHHHHHHTTCHHHHHHHTC
T ss_pred CCCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHHC
T ss_conf 0578888989999989826---899999998798699999863
No 143
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=95.90 E-value=0.0064 Score=37.08 Aligned_cols=42 Identities=12% Similarity=-0.004 Sum_probs=29.1
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 411689888899997058882064433421134432000020
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTG 99 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~ 99 (232)
+.+.+=..+++++.|.-..||.|....+.+.....++.....
T Consensus 24 vsL~d~kGKvvlv~f~~t~Cp~c~~~~~~~~~~~~~~~~~~~ 65 (169)
T 2v1m_A 24 VSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGL 65 (169)
T ss_dssp EEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTE
T ss_pred ECHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 158993998899998178898857878999987765302433
No 144
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=95.88 E-value=0.019 Score=34.14 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=29.1
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 411689888899997058882064433421134432000020379
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLR 102 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~ 102 (232)
+.+-+=..+++++.|.--.||+|+.-.+.+.....+ +.+.+...
T Consensus 25 vsLsd~kGKvvll~fwatwC~~c~~e~p~L~~l~~~-~~~~g~~v 68 (170)
T 2p5q_A 25 VDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEK-YKDQGLEI 68 (170)
T ss_dssp EEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHH-HGGGTEEE
T ss_pred ECHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH-CCCCCCEE
T ss_conf 728994998899998468783277778999998643-12467268
No 145
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.29 E-value=0.11 Score=29.35 Aligned_cols=39 Identities=10% Similarity=0.221 Sum_probs=29.5
Q ss_pred HHHCCCCCCCEEEE----CCEEE--CCCCCHHHHHHHHHHHHHHH
Q ss_conf 98618853657998----98996--18999999999999999986
Q gi|254780477|r 191 SEDFAIDSTPVFFI----GGNLY--LGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 191 ~~~~gi~gTPt~~V----nG~~~--~g~~~~~~~~~~id~ll~~~ 229 (232)
.+.+++.|.|+++| +|+.+ .|..+.++|...+...|++-
T Consensus 94 ~~~y~v~~~P~i~~idP~tGe~i~~~~~~~~~~fl~~L~~fl~~~ 138 (153)
T 2dlx_A 94 IQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp HHHHTCCSSSEEEEECTTTCCCCEEESSCCHHHHHHHHHHHHHHT
T ss_pred HHHCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 983676899879999489994877756789999999999998506
No 146
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, structural genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=95.19 E-value=0.041 Score=32.02 Aligned_cols=41 Identities=15% Similarity=0.104 Sum_probs=29.2
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 41168988889999705888206443342113443200002
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKT 98 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~ 98 (232)
+.+.+=..+++|+.|+--.||.|....+.+.....++....
T Consensus 42 vsLsdfkGKvvll~F~at~C~~c~~~~~~l~~l~~~~~~~~ 82 (181)
T 2p31_A 42 VSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHH 82 (181)
T ss_dssp EEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT
T ss_pred ECHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCE
T ss_conf 71899499889999968879982576334443031344420
No 147
>3fk8_A Disulphide isomerase; APC61824.1, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.30A {Xylella fastidiosa TEMECULA1}
Probab=95.06 E-value=0.071 Score=30.48 Aligned_cols=25 Identities=12% Similarity=0.311 Sum_probs=19.9
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 8889999705888206443342113
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFK 89 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~ 89 (232)
.+.+++.|.--.||+|+.+.+.+..
T Consensus 29 ~K~vlv~F~a~WC~~Ck~~~~~~~~ 53 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRN 53 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTS
T ss_pred CCCEEEEEECCCCHHHCCCCCCCCH
T ss_conf 9929999946919301764523211
No 148
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=94.97 E-value=0.0085 Score=36.30 Aligned_cols=36 Identities=19% Similarity=0.603 Sum_probs=30.3
Q ss_pred HHHCCCCCCCEEEE--CCEE---ECCCCCHHHHHHHHHHHH
Q ss_conf 98618853657998--9899---618999999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL---YLGDMSEGVFSKIIDSMI 226 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~---~~g~~~~~~~~~~id~ll 226 (232)
.+++||+|+||+++ ||+. +.|..+.+++++.|++.|
T Consensus 82 ~~~~~V~~~PT~~~~~~G~~v~~~~G~~~~~~l~~~i~~~L 122 (123)
T 1oaz_A 82 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHEEEEECEEEEEEECCCEEEEEECCCCHHHHHHHHHHHC
T ss_conf 56634543438999989939788878999999999999872
No 149
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=94.88 E-value=0.1 Score=29.54 Aligned_cols=31 Identities=13% Similarity=0.275 Sum_probs=24.0
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
Q ss_conf 1885365799898996189999999999999999
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~~id~ll~ 227 (232)
.+.+.+|.+||||+.+-| ++++.+++++-++
T Consensus 54 ~~~~tvPqIfi~g~~IGG---~del~~~~~~~~d 84 (85)
T 1ego_A 54 KPVETVPQIFVDQQHIGG---YTDFAAWVKENLD 84 (85)
T ss_dssp CCSCCSCEEEETTEEEES---SHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCEEEEC---HHHHHHHHHHCCC
T ss_conf 999874989999999978---8999999986379
No 150
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=93.92 E-value=0.32 Score=26.32 Aligned_cols=26 Identities=15% Similarity=0.482 Sum_probs=18.3
Q ss_pred CCEEEEEEECC-CCCCHHHHHHHHHHH
Q ss_conf 88899997058-882064433421134
Q gi|254780477|r 65 APVTMVEYASM-TCFHCAEFHNKTFKY 90 (232)
Q Consensus 65 A~v~ivef~D~-~Cp~C~~~~~~~~~~ 90 (232)
-|+.++.|++. .|+||..+.+.+...
T Consensus 22 ~~~~~~~f~~~~~c~~c~~~~~~~~e~ 48 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQEL 48 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 975999998488870689999999999
No 151
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=92.83 E-value=0.13 Score=28.90 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=23.5
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 888899997058882064433421134432
Q gi|254780477|r 64 DAPVTMVEYASMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 64 ~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~ 93 (232)
+.+..+|+|..+.|+||+++.++.....+.
T Consensus 30 ~~~~~lV~FYapwC~~Ck~l~p~~~~~a~~ 59 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAET 59 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 199789999899887899889999999998
No 152
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.83 E-value=0.3 Score=26.57 Aligned_cols=30 Identities=27% Similarity=0.310 Sum_probs=22.4
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 8618853657998989961899999999999
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
+..|..++|+++|||+.+.| .+.+.++++|
T Consensus 61 ~~~g~~~vP~i~i~~~~igG-~~~~~i~~lL 90 (92)
T 3ic4_A 61 SISGSYSVPVVVKGDKHVLG-YNEEKLKELI 90 (92)
T ss_dssp HHHSSSCSCEEEETTEEEES-CCHHHHHHHH
T ss_pred HHCCCCEEEEEEECCEEEEC-CCHHHHHHHH
T ss_conf 76699658799999999979-9989999985
No 153
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GTT; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=92.48 E-value=0.07 Score=30.52 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=27.7
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 6188536579989899618999999999999999986
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~~id~ll~~~ 229 (232)
..|.+.+|.+||||+.+-| ++++.+.++++|+++
T Consensus 56 ~~~~~tvP~Ifi~g~~IGG---~~el~~~l~~ll~~k 89 (89)
T 3msz_A 56 IFPISTVPQIFIDDEHIGG---FTELKANADKILNKK 89 (89)
T ss_dssp SSCCCSSCEEEETTEEEES---HHHHHHTHHHHTTC-
T ss_pred CCCCCCCCEEEECCEEEEC---HHHHHHHHHHHHCCC
T ss_conf 6899412779989979978---799999999987669
No 154
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=92.45 E-value=0.17 Score=28.10 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=24.4
Q ss_pred HCCCCCCCEEEE--CCE-----EECCCCCHHHHHHHHHHH
Q ss_conf 618853657998--989-----961899999999999999
Q gi|254780477|r 193 DFAIDSTPVFFI--GGN-----LYLGDMSEGVFSKIIDSM 225 (232)
Q Consensus 193 ~~gi~gTPt~~V--nG~-----~~~g~~~~~~~~~~id~l 225 (232)
.++|.|+||+++ +|+ .+.|..+.++|.+.|++-
T Consensus 76 ~~~V~~~Pti~~f~~g~~~~~~~~~g~~~~~~l~~fi~~~ 115 (121)
T 2djj_A 76 PDEIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp SSCCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHT
T ss_pred HCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHC
T ss_conf 2560511569999899486578845999999999999976
No 155
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=92.19 E-value=0.093 Score=29.73 Aligned_cols=30 Identities=23% Similarity=0.449 Sum_probs=24.6
Q ss_pred HCCCCCCCEEEECCEEE-CCC-CCHHHHHHHH
Q ss_conf 61885365799898996-189-9999999999
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLY-LGD-MSEGVFSKII 222 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~-~g~-~~~~~~~~~i 222 (232)
++||-+||+++|||+.+ .|. ++.++++++|
T Consensus 45 ~~gVm~tPalvIdg~vv~~G~vPs~~ei~~~L 76 (77)
T 1ilo_A 45 EAGLTALPGLAVDGELKIMGRVASKEEIKKIL 76 (77)
T ss_dssp HHTCSSSSCEEETTEEEECSSCCCHHHHHHHC
T ss_pred HCCCCCCCEEEECCEEEEEECCCCHHHHHHHH
T ss_conf 74975688799999999973589999999974
No 156
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=92.08 E-value=0.13 Score=28.73 Aligned_cols=35 Identities=11% Similarity=0.194 Sum_probs=26.1
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 16898888999970588820644334211344320
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
+-+.+-+++|+.|....||+|+.+.+.+.....++
T Consensus 18 I~~~~~k~VvV~F~a~wC~~C~~~~p~l~~la~~~ 52 (142)
T 1qgv_A 18 ILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKV 52 (142)
T ss_dssp HHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 97289988999995995888778442199999996
No 157
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=91.96 E-value=0.21 Score=27.48 Aligned_cols=37 Identities=14% Similarity=0.408 Sum_probs=27.0
Q ss_pred CCCCCCCEEEE---CCEE---ECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 18853657998---9899---6189999999999999999860
Q gi|254780477|r 194 FAIDSTPVFFI---GGNL---YLGDMSEGVFSKIIDSMIQDST 230 (232)
Q Consensus 194 ~gi~gTPt~~V---nG~~---~~g~~~~~~~~~~id~ll~~~~ 230 (232)
+.+.-||++++ +|+. +.+..+.+++.+.|..+|++.|
T Consensus 122 ~~~~H~~~~~LID~~G~i~~~~~~~~~~~~i~~~i~~~L~~~~ 164 (164)
T 2ggt_A 122 YIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRPYR 164 (164)
T ss_dssp EEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHGGGC
T ss_pred CEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 2676653899994998599997999998999999999987319
No 158
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown function; 1.50A {Trypanosoma cruzi}
Probab=91.24 E-value=0.1 Score=29.44 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=26.1
Q ss_pred HHHCCCCCCCEEEE--CC-----EEECCCCCHHHHHHHHHH
Q ss_conf 98618853657998--98-----996189999999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GG-----NLYLGDMSEGVFSKIIDS 224 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG-----~~~~g~~~~~~~~~~id~ 224 (232)
.+.++|+|.||+++ +| ..+.|..+.+.+.+.|.+
T Consensus 85 ~~~~~I~~~Pti~~f~~g~~~~~~~y~G~r~~~~l~~Fi~~ 125 (127)
T 3h79_A 85 IERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp HHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHH
T ss_pred HHHCCCCEECEEEEEECCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 99879837366999989883653681698999999999997
No 159
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=91.15 E-value=0.23 Score=27.22 Aligned_cols=31 Identities=13% Similarity=0.011 Sum_probs=22.7
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 8618853657998989961899999999999
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
+..|..++|+++|||..+.+..+.++++++|
T Consensus 71 ~~~g~~~vP~i~i~d~~~i~G~~~~~l~~~L 101 (103)
T 3nzn_A 71 RFNPSVSFPTTIINDEKAIVGFKEKEIRESL 101 (103)
T ss_dssp HHCTTCCSCEEEETTTEEEESCCHHHHHHHT
T ss_pred HHCCCEEEEEEEECCCEEEECCCHHHHHHHC
T ss_conf 6689946618998894899389999999865
No 160
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=91.00 E-value=0.18 Score=27.96 Aligned_cols=37 Identities=19% Similarity=0.444 Sum_probs=28.3
Q ss_pred HHHCCCCCCCEEEECCEEE-CCCCCHHHHHHHHHHHHHH
Q ss_conf 9861885365799898996-1899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFIGGNLY-LGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~VnG~~~-~g~~~~~~~~~~id~ll~~ 228 (232)
.+++|+. +|+++|||+.+ .|..+.+.+++.|+++..+
T Consensus 60 ~~~y~~~-VPvl~vdg~~~~~g~~~~~~l~~~L~~l~~~ 97 (100)
T 1wjk_A 60 YERYKFD-IPVFHLNGQFLMMHRVNTSKLEKQLRKLSGP 97 (100)
T ss_dssp HHHSSSS-CSEEEESSSEEEESSCCHHHHHHHHHSSSCS
T ss_pred HHHHCCC-CCEEEECCEEEEEECCCHHHHHHHHHHHHCC
T ss_conf 9987998-7969999999997269999999999997555
No 161
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix K1}
Probab=90.90 E-value=0.46 Score=25.38 Aligned_cols=26 Identities=12% Similarity=0.093 Sum_probs=15.6
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 88889999705888206443342113
Q gi|254780477|r 64 DAPVTMVEYASMTCFHCAEFHNKTFK 89 (232)
Q Consensus 64 ~A~v~ivef~D~~Cp~C~~~~~~~~~ 89 (232)
+.|+.|+.|..+.||||....+....
T Consensus 137 d~~~~i~~F~ap~C~~C~~~~~~~~~ 162 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHM 162 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 78707999984899865889999999
No 162
>3me7_A Putative uncharacterized protein; electron transfer protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=90.69 E-value=0.44 Score=25.49 Aligned_cols=50 Identities=8% Similarity=0.068 Sum_probs=29.8
Q ss_pred CCCCCCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 411689888899997058882-06443342113443200002037998433
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCF-HCAEFHNKTFKYLEDKYIKTGKLRYILRE 107 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp-~C~~~~~~~~~~l~~~~~~~~~~~~~~~~ 107 (232)
+.+-+-..+++|+.|+--.|| .|....+.+.+...+.......+.++...
T Consensus 21 vsLsd~~Gk~vll~f~~t~C~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~ 71 (170)
T 3me7_A 21 FQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFT 71 (170)
T ss_dssp EEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEE
T ss_pred EEHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 718996998799999734556656088888798898641256514788722
No 163
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GTT; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=90.53 E-value=0.75 Score=24.01 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=25.3
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 861885365799898996189999999999-----99999986
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
+..|...+|.+||||+.+-| ++++.++ ++.+|++.
T Consensus 67 ~~~g~~tvPqIfi~g~~IGG---~del~~l~~~g~L~~lLk~~ 106 (116)
T 2e7p_A 67 HWTGRGTVPNVFIGGKQIGG---CDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHSCCSSCEEEETTEEEEC---HHHHHHHHHTTCHHHHHHHT
T ss_pred HHCCCCCCCEEEECCEEECC---HHHHHHHHHCCCHHHHHHHC
T ss_conf 71699889858899989717---89999999879899999881
No 164
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=90.03 E-value=0.24 Score=27.17 Aligned_cols=31 Identities=3% Similarity=-0.043 Sum_probs=22.9
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8888999970588820644334211344320
Q gi|254780477|r 64 DAPVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 64 ~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
....+|+.|+...||+|+.+++.+.+..+++
T Consensus 22 ~~~~Vvv~f~~~~c~~C~~l~p~l~~la~~~ 52 (118)
T 3evi_A 22 EDVWVIIHLYRSSIPMCLLVNQHLSLLARKF 52 (118)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9978999999999811433218999999977
No 165
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.81 E-value=0.16 Score=28.19 Aligned_cols=29 Identities=14% Similarity=0.052 Sum_probs=21.8
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88999970588820644334211344320
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
...|+.|+-..||||+.+.+.+.+...++
T Consensus 27 ~~~lV~F~A~WC~~C~~~~P~~~~la~~~ 55 (137)
T 2dj0_A 27 VTWIVEFFANWSNDCQSFAPIYADLSLKY 55 (137)
T ss_dssp SCEEEEECCTTCSTTTTTHHHHHHHHHHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 70999998999989997717899999874
No 166
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron transport, structural genomics; NMR {Bartonella henselae str}
Probab=89.80 E-value=0.41 Score=25.65 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=24.3
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 1885365799898996189999999999-----99999986
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
.|.+.+|.++|||+.+.| ++++.++ ++++|++.
T Consensus 51 ~g~~tvP~i~i~g~~iGG---~~el~~l~~~g~L~~lLk~~ 88 (89)
T 2klx_A 51 NGRNTFPQIFIGDYHVGG---CDDLYALENKGKLDSLLQDV 88 (89)
T ss_dssp HSSCCSCEEEETTEECCS---HHHHHHHHHHTTHHHHHHHH
T ss_pred CCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHC
T ss_conf 599875959999999837---89999999879689999752
No 167
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=89.22 E-value=0.8 Score=23.83 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=22.3
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 618853657998989961899999999999
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
..|.+++|.++|||+.+.|. +.+.++++.
T Consensus 45 ~~g~~tvP~v~i~g~~i~Gf-~~d~i~~L~ 73 (75)
T 1r7h_A 45 ALGYVQAPVVEVDGEHWSGF-RPERIKQLQ 73 (75)
T ss_dssp HTTCBCCCEEEETTEEEESC-CHHHHHHHH
T ss_pred HCCCCCCCEEEECCEEEECC-CHHHHHHHH
T ss_conf 71799649899999999479-989999997
No 168
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics consortium, SGC, cytoplasm, developmental protein; 2.21A {Homo sapiens}
Probab=88.97 E-value=0.41 Score=25.69 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=24.4
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 61885365799898996189999999999-----99999986
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
..|.+.+|.+||||+.+-| ++++.++ ++.+|+++
T Consensus 65 ~~g~~tvPqifi~g~~IGG---~~el~~l~~~G~L~~~L~e~ 103 (114)
T 3h8q_A 65 ITNQKTVPNIFVNKVHVGG---CDQTFQAYQSGLLQKLLQED 103 (114)
T ss_dssp HHSCCSSCEEEETTEEEES---HHHHHHHHHHTHHHHHHHSC
T ss_pred HCCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHH
T ss_conf 5499879989999989817---89999999869899999985
No 169
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} PDB: 1xbs_A
Probab=88.80 E-value=0.3 Score=26.53 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=23.3
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9888899997058882064433421134432
Q gi|254780477|r 63 KDAPVTMVEYASMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 63 ~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~ 93 (232)
..-+++|+.|....||+|+++.+.+.....+
T Consensus 21 ~~~k~Vvv~F~a~wc~~C~~~~p~l~~~a~~ 51 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSD 51 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 7998799998189994831100459888987
No 170
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=88.66 E-value=0.43 Score=25.56 Aligned_cols=46 Identities=4% Similarity=0.192 Sum_probs=30.7
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 16898888999970588820644334211344320000203799843
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILR 106 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~ 106 (232)
+.+-..+++++-|.-..||+|++..+.+.+..+++. +...+.++..
T Consensus 23 l~~l~GK~vll~FwatWC~pC~~e~p~L~~~~~~~~-~~~~~~vi~v 68 (146)
T 1o8x_A 23 VKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFH-ESKNFEVVFC 68 (146)
T ss_dssp GGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHT-TTTTEEEEEE
T ss_pred HHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH-HCCCCEEEEE
T ss_conf 999199889999988989889987398999999864-2269679998
No 171
>3fz9_A Glutaredoxin; oxidoreductase; HET: GSH; 1.70A {Populus tremula x populus tremuloides} PDB: 3fza_A*
Probab=88.66 E-value=1 Score=23.17 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=25.0
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 861885365799898996189999999999-----99999986
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
+..|.++.|.+||||+.+-| ++++.++ +..+|++.
T Consensus 66 ~~tg~~tvP~vfi~g~~IGG---~~dl~~l~~~G~L~~~L~~~ 105 (112)
T 3fz9_A 66 RLTGQHTVPNVFIGGKHIGG---CTDTVKLYRKGELEPLLSEA 105 (112)
T ss_dssp HHHSCCSSCEEEETTEEEES---HHHHHHHHHTTCHHHHHHHT
T ss_pred HHCCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHC
T ss_conf 95699889858899989807---79999999869899999982
No 172
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=88.40 E-value=0.47 Score=25.29 Aligned_cols=46 Identities=7% Similarity=0.191 Sum_probs=30.6
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 16898888999970588820644334211344320000203799843
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILR 106 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~ 106 (232)
+-+-..+++++-|+--.||+|+++.+.+.+..+++ .+...+.++..
T Consensus 23 l~~~~GK~vll~FwAtWC~pC~~~~p~L~~l~~~~-~~~~~~~vi~v 68 (144)
T 1i5g_A 23 LPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAH-AEKKNFEVMLI 68 (144)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHH-TTTTTEEEEEE
T ss_pred HHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH-HCCCCCEEEEE
T ss_conf 99919998999998788987987511089999986-50578489998
No 173
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=87.69 E-value=0.61 Score=24.57 Aligned_cols=29 Identities=14% Similarity=0.336 Sum_probs=22.6
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHH
Q ss_conf 861885365799898996189999999999
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKI 221 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~ 221 (232)
+..|.+++|.++|||+.+.| .+++.++++
T Consensus 44 ~~~g~~tvP~v~i~~~~i~G-f~~d~l~~L 72 (81)
T 1h75_A 44 RAQGFRQLPVVIAGDLSWSG-FRPDMINRL 72 (81)
T ss_dssp HHTTCCSSCEEEETTEEEES-CCHHHHGGG
T ss_pred HHHCCCEECEEEECCEEEEC-CCHHHHHHH
T ss_conf 98599851589999999979-898999999
No 174
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=86.59 E-value=0.69 Score=24.23 Aligned_cols=36 Identities=11% Similarity=0.253 Sum_probs=24.7
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHHH
Q ss_conf 861885365799898996189999999999-----999999860
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDST 230 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~~ 230 (232)
+..|....|.+||||+.+-| ++++.++ +..+|+|..
T Consensus 96 ~~~G~~tvPqVfI~Gk~IGG---~del~~l~~~G~L~~lL~e~~ 136 (146)
T 2ht9_A 96 KMTGERTVPRIFVNGTFIGG---ATDTHRLHKEGKLLPLVHQCY 136 (146)
T ss_dssp HHHSCCCSCEEEETTEEEES---HHHHHHHHHTTCHHHHHHHTT
T ss_pred HHCCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHHH
T ss_conf 86699866959999989847---799999998798999999872
No 175
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron transport, structural genomics; NMR {Brucella melitensis}
Probab=86.15 E-value=0.54 Score=24.89 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=23.7
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 61885365799898996189999999999-----99999986
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
..|.+.+|.++|||+.+-| ++++.++ ++++|+..
T Consensus 51 ~~g~~tvPqI~i~g~~IGG---~~el~~~~~~g~L~~lL~~~ 89 (92)
T 2khp_A 51 RSGRNTFPQIFIGSVHVGG---CDDLYALEDEGKLDSLLKTG 89 (92)
T ss_dssp HHTSSCCCEEEETTEEEES---HHHHHHHHTTTCHHHHHHHS
T ss_pred HCCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHCC
T ss_conf 8099723859999999978---89999999869699998408
No 176
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=85.76 E-value=0.3 Score=26.51 Aligned_cols=22 Identities=5% Similarity=-0.117 Sum_probs=18.4
Q ss_pred CEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 88999970588820644334211
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTF 88 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~ 88 (232)
+ .+++|+.+.|+||+++.++..
T Consensus 29 ~-~lv~fyapwc~~ck~~~p~~~ 50 (350)
T 1sji_A 29 D-VLCLYYHESVSSDKVAQKQFQ 50 (350)
T ss_dssp S-EEEEEEECCSCSSSTTSHHHH
T ss_pred C-EEEEEECCCCHHHHHHCHHHH
T ss_conf 9-899997689847777476788
No 177
>3ctg_A Glutaredoxin-2; reduced form, cytoplasm, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=85.48 E-value=0.5 Score=25.14 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=23.2
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHH
Q ss_conf 861885365799898996189999999999-----9999998
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQD 228 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~ 228 (232)
+..|.+.+|.+||||+.+-| ++++.++ ++++|++
T Consensus 88 ~~tg~~TvPqIfI~g~~IGG---~ddl~~l~~~G~L~~lLk~ 126 (129)
T 3ctg_A 88 EISGQKTVPNVYINGKHIGG---NSDLETLKKNGKLAEILKP 126 (129)
T ss_dssp HHHSCCSSCEEEETTEEEES---HHHHHHHHHTTHHHHHTTT
T ss_pred HCCCCCCCCEEEECCEEECC---HHHHHHHHHCCCHHHHHHH
T ss_conf 72399989948999989847---8999999987989999999
No 178
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.13 E-value=0.86 Score=23.63 Aligned_cols=36 Identities=11% Similarity=0.253 Sum_probs=26.0
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHHH
Q ss_conf 861885365799898996189999999999-----999999860
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDST 230 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~~ 230 (232)
+..|....|.+||||+.+-| ++++.++ +.+||++..
T Consensus 74 ~~tG~~tvP~VfI~g~~IGG---~del~~l~~~G~L~~lLk~a~ 114 (130)
T 2cq9_A 74 KMTGERTVPRIFVNGTFIGG---ATDTHRLHKEGKLLPLVHQCY 114 (130)
T ss_dssp HHHSSCCSSEEEETTEEEEE---HHHHHHHHHHTSSHHHHHHHS
T ss_pred HHCCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHHC
T ss_conf 95599986959999989836---899999998698999999840
No 179
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=85.11 E-value=0.36 Score=25.99 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=18.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9997058882064433421134432
Q gi|254780477|r 69 MVEYASMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 69 ivef~D~~Cp~C~~~~~~~~~~l~~ 93 (232)
++.|.-+.||||+++.+...+.-+.
T Consensus 16 ~v~f~A~WCghCk~~kp~~~k~a~~ 40 (106)
T 3kp8_A 16 GTMYGAYWCPHCQDQKELFGAAFDQ 40 (106)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGG
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 6999788588799999999999855
No 180
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD protein, structural genomics, structural genomics consortium, SGC, unknown function; 1.73A {Plasmodium yoelii}
Probab=84.99 E-value=0.83 Score=23.74 Aligned_cols=32 Identities=13% Similarity=0.273 Sum_probs=25.0
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 98888999970588820644334211344320
Q gi|254780477|r 63 KDAPVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 63 ~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+-+++|+.|..-.||.|..+.+.+.....+.
T Consensus 39 e~dkvVVV~F~a~wC~~C~~m~p~L~kla~~~ 70 (160)
T 2av4_A 39 EDERLVCIRFGHDYDPDCMKMDELLYKVADDI 70 (160)
T ss_dssp CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCHHHCCCEEEECHHCC
T ss_conf 79988999995898854020245884102167
No 181
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=84.93 E-value=0.6 Score=24.63 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=24.1
Q ss_pred HHHCCCCCCCEEEE--CCEEE-CCCCCHHHHHHHH
Q ss_conf 98618853657998--98996-1899999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNLY-LGDMSEGVFSKII 222 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~~-~g~~~~~~~~~~i 222 (232)
+++||++ +|++++ ||+.+ .+..+.+++++.|
T Consensus 73 ~~~y~v~-iPtl~~~~~G~el~~~~~d~~~lr~~L 106 (107)
T 2fgx_A 73 TRLYNDR-VPVLFAVNEDKELCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHSTTS-CSEEEETTTTEEEECSSCCCHHHHHHH
T ss_pred HHHHCCC-CCEEEEEECCEEEEEECCCHHHHHHHH
T ss_conf 9995950-236999989999998148999999975
No 182
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein structure initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=84.91 E-value=1.9 Score=21.47 Aligned_cols=33 Identities=12% Similarity=0.110 Sum_probs=26.1
Q ss_pred CCCCEEEECCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 536579989899618999999999999999986
Q gi|254780477|r 197 DSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQDS 229 (232)
Q Consensus 197 ~gTPt~~VnG~~~~g~~~~~~~~~~id~ll~~~ 229 (232)
-.||.++|||+......+.+.+...|+......
T Consensus 113 vYTPq~VVnG~~~~~gs~~~~~~~~i~~~~~~~ 145 (270)
T 2axo_A 113 VYTPQAILNGRDHVKGADVRGIYDRLDAFKREG 145 (270)
T ss_dssp CCSSEEEETTTEEEETTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 849979993813566578789999999877217
No 183
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=84.72 E-value=1.6 Score=21.98 Aligned_cols=27 Identities=15% Similarity=0.110 Sum_probs=20.5
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 618853657998989961899999999999
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
..|.+++|.++|||+.+-| ++++.++.
T Consensus 46 ~~g~~tvP~v~i~~~~IGG---~del~~l~ 72 (82)
T 1fov_A 46 RSGRTTVPQIFIDAQHIGG---YDDLYALD 72 (82)
T ss_dssp HHSSCCSCEEEETTEEEES---HHHHHHHH
T ss_pred HCCCCCCCEEEECCEEEEC---HHHHHHHH
T ss_conf 7399967989999999978---79999999
No 184
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron transport, oxidoreductase; 1.80A {Ectromelia virus moscow} PDB: 2hzf_A 2hze_B
Probab=84.69 E-value=0.73 Score=24.09 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=23.1
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 1885365799898996189999999999-----99999986
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
.|.+.+|.+||||+.+-| ++++.++ ++.+|++.
T Consensus 71 tg~~tvPqIfi~G~~IGG---~ddl~~l~~~g~L~~lL~~~ 108 (114)
T 2hze_A 71 TGGKTVPRIFFGKTSIGG---YSDLLEIDNMDALGDILSSI 108 (114)
T ss_dssp HSCCSSCEEEETTEEEES---HHHHHHHHHTTCHHHHHHHT
T ss_pred CCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHC
T ss_conf 458789868899979806---79999999888799999876
No 185
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=84.60 E-value=0.73 Score=24.08 Aligned_cols=29 Identities=3% Similarity=-0.062 Sum_probs=22.5
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88999970588820644334211344320
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
..+|+.|+...|++|+.+++.+....+++
T Consensus 31 ~~VvV~f~~~~c~~C~~l~~~l~~la~~~ 59 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQHLSVLARKF 59 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 77999998999976677779999998767
No 186
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=84.32 E-value=0.65 Score=24.41 Aligned_cols=24 Identities=21% Similarity=0.162 Sum_probs=20.0
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 889999705888206443342113
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFK 89 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~ 89 (232)
+..++.|.-..||+|+++.+.+..
T Consensus 47 Kpvlv~F~a~WC~~Ck~~~~~~~~ 70 (164)
T 1sen_A 47 LPLMVIIHKSWCGACKALKPKFAE 70 (164)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCCCCCCHHHCCC
T ss_conf 979999888988271257301344
No 187
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana}
Probab=83.77 E-value=1.5 Score=22.16 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=23.3
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHH--HHHHHHHHH
Q ss_conf 188536579989899618999999999--999999986
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSK--IIDSMIQDS 229 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~--~id~ll~~~ 229 (232)
.|-+.+|.+||||+.+-|.-...++.+ -++++|+++
T Consensus 69 tg~~TvPqIFi~g~~IGG~d~l~~l~~~G~L~~~L~~a 106 (109)
T 3ipz_A 69 SNWPTFPQLYIGGEFFGGCDITLEAFKTGELQEEVEKA 106 (109)
T ss_dssp HTCSSSCEEEETTEEEECHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHHH
T ss_conf 24788885989998987789999999879999999986
No 188
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=83.12 E-value=1.8 Score=21.64 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=22.3
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHH-----HHHHHHHHH
Q ss_conf 6188536579989899618999999999-----999999986
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSK-----IIDSMIQDS 229 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~-----~id~ll~~~ 229 (232)
..|.+..|.+||||+.+-| ++++.+ -+..+|++.
T Consensus 63 ~tg~~tvPqVfi~g~~IGG---~~el~~l~~~G~L~~~L~~~ 101 (105)
T 1kte_A 63 LTGARTVPRVFIGKECIGG---CTDLESMHKRGELLTRLQQV 101 (105)
T ss_dssp HHSCCCSCEEEETTEEEES---HHHHHHHHHHTHHHHHHHHH
T ss_pred CCCCCCCCEEEECCEEEEC---HHHHHHHHHCCCHHHHHHHC
T ss_conf 2799538979999969837---89999999879899999975
No 189
>1a8y_A Calsequestrin; calcium-binding protein, sarcoplasmic reticulum, rabbit skeletal muscle; 2.40A {Oryctolagus cuniculus} SCOP: c.47.1.3 c.47.1.3 c.47.1.3
Probab=83.12 E-value=1.6 Score=21.93 Aligned_cols=22 Identities=9% Similarity=-0.144 Sum_probs=17.6
Q ss_pred CCEEEEEEECCCCCCHHHHHHHH
Q ss_conf 88899997058882064433421
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKT 87 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~ 87 (232)
.+..++.|..+ |+||+...+..
T Consensus 30 ~~~~lV~Fyap-c~~ck~~~~~~ 51 (367)
T 1a8y_A 30 YEVLALLYHEP-PEDDKASQRQF 51 (367)
T ss_dssp CSEEEEEEECC-CCSSHHHHHHH
T ss_pred CCEEEEEEECC-CCCCHHHCHHH
T ss_conf 98699999899-99646537123
No 190
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=82.42 E-value=2.4 Score=20.82 Aligned_cols=41 Identities=12% Similarity=0.106 Sum_probs=28.9
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 411689888899997058882064433421134432000020
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTG 99 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~ 99 (232)
+.+.+=..+++|+.|.--.||+|..-.+.+.+..+++ .+.+
T Consensus 40 vsLsdfkGKvvli~F~at~Cp~C~~e~~~L~~l~~~~-~~~~ 80 (183)
T 2obi_A 40 VNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARY-AECG 80 (183)
T ss_dssp EEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHH-GGGT
T ss_pred ECHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCC
T ss_conf 6089929988999998689948388999999875032-0378
No 191
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=82.28 E-value=1.5 Score=22.10 Aligned_cols=36 Identities=6% Similarity=0.191 Sum_probs=23.6
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHH--HHHHHHHHH
Q ss_conf 188536579989899618999999999--999999986
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSK--IIDSMIQDS 229 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~--~id~ll~~~ 229 (232)
.|-+.+|.+||||+.+-|.-...++.. -+..+|++.
T Consensus 70 tg~~TvPqIFI~G~~IGG~d~l~~l~~~G~L~~lLk~~ 107 (121)
T 3gx8_A 70 SEWPTIPQLYVNKEFIGGCDVITSMARSGELADLLEEA 107 (121)
T ss_dssp HTCCSSCEEEETTEEEESHHHHHHHHHHTHHHHHHHHT
T ss_pred CCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHHC
T ss_conf 23566883889998987889999999869989999984
No 192
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=81.98 E-value=1.6 Score=21.90 Aligned_cols=38 Identities=13% Similarity=0.214 Sum_probs=24.8
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHH--HHHHHHHHH
Q ss_conf 86188536579989899618999999999--999999986
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSK--IIDSMIQDS 229 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~--~id~ll~~~ 229 (232)
+..|-+.+|.+||||+.+-|.-+..++.. -++++|++.
T Consensus 312 ~~TG~~TVPqIFI~Gk~IGG~DdL~~L~~~GkL~elLke~ 351 (362)
T 2jad_A 312 EINGQRTVPNIYINGKHIGGNDDLQELRETGELEELLEPI 351 (362)
T ss_dssp HHHCCCSSCEEEETTEEEESHHHHHHHHHSSHHHHHHHHH
T ss_pred HHHCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHHH
T ss_conf 9739998195999999982789999998869879999984
No 193
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=81.87 E-value=0.75 Score=24.00 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=21.6
Q ss_pred CCCCCCCCCEEEEEEE----C---CCCCCHHHHHHHHHHHHHHH
Q ss_conf 4116898888999970----5---88820644334211344320
Q gi|254780477|r 58 VSIGQKDAPVTMVEYA----S---MTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~----D---~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+.|+.+..+ |+.|. + ..|++|+.+.+.....-+.+
T Consensus 31 ~v~~~r~y~~-vv~fta~~~~~~~~~C~~Ck~~~p~~~~lA~~~ 73 (178)
T 3ga4_A 31 LSRGVPGYFN-ILYITMRGTNSNGMSCQLCHDFEKTYHAVADVI 73 (178)
T ss_dssp HTTCCTTCEE-EEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCEE-EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9627788479-999953666657987976999989999999997
No 194
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), chaperone; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=81.77 E-value=1.1 Score=22.90 Aligned_cols=23 Identities=4% Similarity=0.160 Sum_probs=17.6
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 8889999705888206443342113
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFK 89 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~ 89 (232)
-+.++|+|.-+.|+||++ ++...
T Consensus 22 ~~~~lV~Fya~wc~~ck~--~~~~~ 44 (240)
T 2qc7_A 22 SKFVLVKFDTQYPYGEKQ--DEFKR 44 (240)
T ss_dssp CSEEEEEECCSSCCSHHH--HHHHH
T ss_pred CCCEEEEEECCCCCHHCC--HHHHH
T ss_conf 998899996999841048--89999
No 195
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.1
Probab=80.91 E-value=1.4 Score=22.33 Aligned_cols=33 Identities=9% Similarity=-0.025 Sum_probs=26.0
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 898888999970588820644334211344320
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
+-+.++.++.|.--.||+|++..|.+....+++
T Consensus 51 ~~~~~~~~l~f~atWC~pC~~e~P~l~~l~~~~ 83 (167)
T 1z6n_A 51 RIERRYRLLVAGEMWCPDCQINLAALDFAQRLQ 83 (167)
T ss_dssp TCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC
T ss_pred HCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 458984999999896975899899999999988
No 196
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=78.77 E-value=2.6 Score=20.64 Aligned_cols=34 Identities=9% Similarity=0.239 Sum_probs=24.2
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHHH
Q ss_conf 1885365799898996189999999999-----999999860
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDST 230 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~~ 230 (232)
.|-+.+|.+||||+.+-| .+++.++ +.++|++..
T Consensus 72 tg~~TvPqIFi~G~~IGG---~ddl~~l~~~GeL~~lL~~~G 110 (118)
T 2wem_A 72 SNWPTIPQVYLNGEFVGG---CDILLQMHQNGDLVEELKKLG 110 (118)
T ss_dssp HTCCSSCEEEETTEEEES---HHHHHHHHHHSHHHHHHHHTT
T ss_pred CCCCCCCEEEECCEEECC---HHHHHHHHHCCCHHHHHHHCC
T ss_conf 035756637699988778---899999998798999999808
No 197
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=78.57 E-value=1.7 Score=21.71 Aligned_cols=32 Identities=6% Similarity=0.056 Sum_probs=23.4
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 98888999970588820644334211344320
Q gi|254780477|r 63 KDAPVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 63 ~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.....+|+.|+...||.|+.+.+.+...-.++
T Consensus 131 ~~~~~VVVhfy~~~~~~C~~l~~~L~~LA~~~ 162 (245)
T 1a0r_P 131 QKITTIVVHIYEDGIKGCDALNSSLICLAAEY 162 (245)
T ss_dssp CTTCEEEEEEECTTSTTHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 79987999977888734667728999999866
No 198
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=78.06 E-value=1.9 Score=21.40 Aligned_cols=30 Identities=7% Similarity=0.012 Sum_probs=21.6
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 888999970588820644334211344320
Q gi|254780477|r 65 APVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 65 A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
...+|+.|++..||.|+.+++-+...-.++
T Consensus 120 ~~~VVVhfy~~~~~~C~~l~~~l~~La~~~ 149 (217)
T 2trc_P 120 VTTIVVNIYEDGVRGCDALNSSLECLAAEY 149 (217)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCCCCCHHHHCHHHHHHHHCC
T ss_conf 976999998999935656274477666417
No 199
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, cytoplasm, transport, glutathione, thioredoxin fold; HET: GSW; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=75.14 E-value=4 Score=19.42 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=22.6
Q ss_pred HCCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 61885365799898996189999999999-----99999986
Q gi|254780477|r 193 DFAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 193 ~~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
..|-+.+|.+||||+.+-|. +++.++ ++.+|++.
T Consensus 85 ~tg~~TvPqVFI~G~~IGG~---ddl~~l~~~GeL~~lL~~~ 123 (135)
T 2wci_A 85 YANWPTFPQLWVDGELVGGC---DIVIEMYQRGELQQLIKET 123 (135)
T ss_dssp HHTCCSSCEEEETTEEEESH---HHHHHHHHHTHHHHHHHHH
T ss_pred HCCCCCCCEEEECCEEECCH---HHHHHHHHCCCHHHHHHHC
T ss_conf 64999889797899998688---9999999869889999980
No 200
>2cx4_A Bacterioferritin comigratory protein; oxidoreductase, antioxidant enzyme, reactive oxygen species, thioredoxin fold, structural genomics; 2.30A {Aeropyrum pernix K1} SCOP: c.47.1.10 PDB: 2cx3_A
Probab=72.60 E-value=3.1 Score=20.08 Aligned_cols=30 Identities=3% Similarity=-0.055 Sum_probs=19.8
Q ss_pred CCEEEEEEE-CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 888999970-588820644334211344320
Q gi|254780477|r 65 APVTMVEYA-SMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 65 A~v~ivef~-D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+.+|+.|+ ...||+|....+.+.+...+.
T Consensus 33 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~ 63 (164)
T 2cx4_A 33 GRPAVLIFFPAAFSPVCTKELCTFRDKMAQL 63 (164)
T ss_dssp SSCEEEEECSCTTCHHHHHHHHHHHHTCTTT
T ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9989999806887968645054134321344
No 201
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide, structural genomics; 1.90A {Homo sapiens}
Probab=72.42 E-value=4.6 Score=19.01 Aligned_cols=41 Identities=10% Similarity=-0.003 Sum_probs=30.4
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 411689888899997058882064433421134432000020
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTG 99 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~ 99 (232)
+.+.+=..+++|+.|.--.||.|....+.+.+..+++ .+.+
T Consensus 42 vsLsdfkGKvvlv~fwat~C~~C~~~~p~L~~l~~ky-k~~g 82 (185)
T 2gs3_A 42 VNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARY-AECG 82 (185)
T ss_dssp EEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHH-GGGT
T ss_pred EEHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH-HCCC
T ss_conf 7289929988999986888988589999999999985-1068
No 202
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=70.76 E-value=2 Score=21.36 Aligned_cols=23 Identities=9% Similarity=0.222 Sum_probs=17.2
Q ss_pred EEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 97058882064433421134432
Q gi|254780477|r 71 EYASMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 71 ef~D~~Cp~C~~~~~~~~~~l~~ 93 (232)
.|+--.||-|-..++++.+.+..
T Consensus 6 iFYHAGCpVCVsAE~~i~~~l~~ 28 (80)
T 2k8s_A 6 IFYHAGCPVCVSAEQAVANAIDP 28 (80)
T ss_dssp EEEECSCHHHHHHHHHHHHHSCT
T ss_pred EEEECCCCEEHHHHHHHHHHHCC
T ss_conf 78736997443468999975185
No 203
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=61.29 E-value=5.7 Score=18.45 Aligned_cols=17 Identities=18% Similarity=0.573 Sum_probs=13.7
Q ss_pred EEEEEECCCCCCHHHHH
Q ss_conf 99997058882064433
Q gi|254780477|r 68 TMVEYASMTCFHCAEFH 84 (232)
Q Consensus 68 ~ivef~D~~Cp~C~~~~ 84 (232)
.|..|.+..||+|.+.-
T Consensus 19 ~v~vf~~~~c~~c~~v~ 35 (598)
T 2x8g_A 19 AVILFSKTTCPYCKKVK 35 (598)
T ss_dssp SEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCCCCHHHH
T ss_conf 39999789999966999
No 204
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal- kingston bacterial structural genomics initiative; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=61.29 E-value=7.7 Score=17.61 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=26.8
Q ss_pred CCCCCCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 411689888899997058882-0644334211344320000203799843
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCF-HCAEFHNKTFKYLEDKYIKTGKLRYILR 106 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp-~C~~~~~~~~~~l~~~~~~~~~~~~~~~ 106 (232)
+.+.+-..+++|+.|+--.|| .|......+....++.......+.++..
T Consensus 26 vsl~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~l~~~~~~v~~v~i 75 (174)
T 1xzo_A 26 VSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISF 75 (174)
T ss_dssp EETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 75899799889999877878986767876766666640354432789842
No 205
>2ywn_A Peroxiredoxin-like protein; redox protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Sulfolobus tokodaii} PDB: 3hjp_A
Probab=60.81 E-value=7.9 Score=17.56 Aligned_cols=32 Identities=6% Similarity=-0.031 Sum_probs=21.6
Q ss_pred CEEEEEEE-CCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 88999970-588820644334211344320000
Q gi|254780477|r 66 PVTMVEYA-SMTCFHCAEFHNKTFKYLEDKYIK 97 (232)
Q Consensus 66 ~v~ivef~-D~~Cp~C~~~~~~~~~~l~~~~~~ 97 (232)
+.+|+.|+ .-.||.|....+.+.+...+....
T Consensus 31 k~vvl~f~~~~~cp~c~~~~~~~~~~~~~~~~~ 63 (157)
T 2ywn_A 31 KVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV 63 (157)
T ss_dssp SCEEEEECSCTTCCC-------CCCGGGGGTTC
T ss_pred CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 979999982267775123235676530001025
No 206
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=60.69 E-value=7.9 Score=17.55 Aligned_cols=28 Identities=25% Similarity=0.332 Sum_probs=21.4
Q ss_pred HHCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 8618853657998989961899999999999
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
+..|.+.+|.++|||+.+-| ++++++.+
T Consensus 213 ~~~g~~TvPqI~i~g~~IGG---~~el~~~l 240 (241)
T 1nm3_A 213 AVSGRTTVPQVFIGGKHIGG---SDDLEKYF 240 (241)
T ss_dssp HHTCCSSSCEEEETTEEEES---HHHHHHC-
T ss_pred HHHCCCCCCEEEECCEEEEC---HHHHHHHH
T ss_conf 97099943979999999968---99999975
No 207
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=59.49 E-value=2.7 Score=20.46 Aligned_cols=33 Identities=12% Similarity=0.346 Sum_probs=22.0
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHHH-----HHHHHHHH
Q ss_conf 1885365799898996189999999999-----99999986
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSKI-----IDSMIQDS 229 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~~-----id~ll~~~ 229 (232)
.|...+|.+||||+.+-| .+++.++ +.++|++.
T Consensus 66 s~~~TvPqIFi~g~~IGG---~d~l~~l~~~G~L~~lL~~~ 103 (109)
T 1wik_A 66 SNWPTYPQLYVRGDLVGG---LDIVKELKDNGELLPILKGE 103 (109)
T ss_dssp HSCCSSCEEECSSSEEEC---HHHHHHHHHHTCSHHHHHTC
T ss_pred CCCCCCCEEEECCEEECC---HHHHHHHHHCCCHHHHHHHC
T ss_conf 699988848786848658---99999999879889999755
No 208
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=57.14 E-value=5.6 Score=18.50 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=20.1
Q ss_pred HCCCCCCCEEEE-CCEEECCCCCHHHHHHHH
Q ss_conf 618853657998-989961899999999999
Q gi|254780477|r 193 DFAIDSTPVFFI-GGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 193 ~~gi~gTPt~~V-nG~~~~g~~~~~~~~~~i 222 (232)
..|.+.+|.+|| ||+.+-| ++++++.+
T Consensus 59 ~~~~~TvPqIfi~dg~~IGG---~del~~~~ 86 (87)
T 1aba_A 59 TQIGLTMPQVFAPDGSHIGG---FDQLREYF 86 (87)
T ss_dssp CCTTCCSCEEECTTSCEEES---HHHHHHHT
T ss_pred CCCCCEECEEEECCCCEEEC---HHHHHHHH
T ss_conf 78996238599659969866---99999985
No 209
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.00 E-value=9.5 Score=17.05 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=27.5
Q ss_pred HHHCCCCCCCEEEE----CC-----EEECCCCCHHHHHHHHHHHHHH
Q ss_conf 98618853657998----98-----9961899999999999999998
Q gi|254780477|r 191 SEDFAIDSTPVFFI----GG-----NLYLGDMSEGVFSKIIDSMIQD 228 (232)
Q Consensus 191 ~~~~gi~gTPt~~V----nG-----~~~~g~~~~~~~~~~id~ll~~ 228 (232)
...+++.++|++.+ ++ ..+.|..+.+++...+...+++
T Consensus 123 ~~~~~~~~~P~~~~i~~~~~~~~~l~~l~G~~s~~ell~~L~~~~e~ 169 (178)
T 2ec4_A 123 IRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEI 169 (178)
T ss_dssp HHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 75236678873788415898633788987889999999999999999
No 210
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.73 E-value=1.8 Score=21.61 Aligned_cols=27 Identities=15% Similarity=0.083 Sum_probs=19.1
Q ss_pred CCCCCCCEEEECCEEECCCCCHHHHHHHHH
Q ss_conf 188536579989899618999999999999
Q gi|254780477|r 194 FAIDSTPVFFIGGNLYLGDMSEGVFSKIID 223 (232)
Q Consensus 194 ~gi~gTPt~~VnG~~~~g~~~~~~~~~~id 223 (232)
.|....|.+||||+++-| ++++..+.+
T Consensus 68 ~g~~tvPqIFi~g~~IGg---ydel~el~e 94 (111)
T 2ct6_A 68 QGNPLPPQIFNGDRYCGD---YDSFFESKE 94 (111)
T ss_dssp SSSCCSCEEEETTEEEEE---HHHHHHHHT
T ss_pred CCCCCCCEEEECCEEEEC---HHHHHHHHH
T ss_conf 799879989999999847---999999997
No 211
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, structural genomics, NPPSFA; 1.85A {Aquifex aeolicus VF5}
Probab=52.20 E-value=11 Score=16.66 Aligned_cols=37 Identities=14% Similarity=0.123 Sum_probs=22.5
Q ss_pred CCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 4116898888999970-588820644334211344320
Q gi|254780477|r 58 VSIGQKDAPVTMVEYA-SMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~-D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
+.+.+-..+.+|+.|+ ...||.|....+.+.+...+.
T Consensus 40 v~L~d~~gk~vvl~f~~~~~~p~C~~e~~~l~~~~~~~ 77 (171)
T 2yzh_A 40 KIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM 77 (171)
T ss_dssp EEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred EEHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHC
T ss_conf 86799689869999836767676754148999998743
No 212
>3i9v_2 NADH-quinone oxidoreductase subunit 2; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_2* 3iam_2* 3ias_2* 3m9s_2*
Probab=51.23 E-value=6.6 Score=18.06 Aligned_cols=86 Identities=13% Similarity=0.237 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-------------------------HHCCHHHHHHHHHHHHH
Q ss_conf 88888865433211345689987643110000688986-------------------------40598999999999999
Q gi|254780477|r 135 FVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDT-------------------------CLNDQNILDDIKAGKKR 189 (232)
Q Consensus 135 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-------------------------~~~~~~~~~~i~~~~~~ 189 (232)
....+...|... +..+.+.+..++..+|+...++.. |...+. ..+....
T Consensus 27 ll~~L~~iQ~~~--GyIp~~al~~iA~~l~v~~a~V~~vatFY~~f~~~p~gk~~i~VC~~~~C~~~Ga--~~l~~~l-- 100 (181)
T 3i9v_2 27 IMPLLRRVQQEE--GWIRPERIEEIARLVGTTPTEVMGVASFYSYYQFVPTGKYHLQVCATLSCKLAGA--EELWDYL-- 100 (181)
T ss_dssp HHHHHHHHHHHH--SSCCHHHHHHHHHHHTSCHHHHHHHHTTCSSCCSSCCCSEEEEEECSHHHHTTTH--HHHHHHH--
T ss_pred HHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCC--HHHHHHH--
T ss_conf 999999999982--9909999999999989299999999976250235889886899559768775788--6899999--
Q ss_pred HHHHCCCC----------------------CCCEEEECCEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99861885----------------------365799898996189999999999999999
Q gi|254780477|r 190 ASEDFAID----------------------STPVFFIGGNLYLGDMSEGVFSKIIDSMIQ 227 (232)
Q Consensus 190 ~~~~~gi~----------------------gTPt~~VnG~~~~g~~~~~~~~~~id~ll~ 227 (232)
.+.+||. --|.+.|||+.+.+..+.+.+..+|+.+-+
T Consensus 101 -~~~Lgi~~gett~Dg~ftle~~~ClG~C~~AP~v~Vn~~~y~~~lt~e~~~~il~~lr~ 159 (181)
T 3i9v_2 101 -TETLGIGPGEVTPDGLFSVQKVECLGSCHTAPVIQVNDEPYVECVTRARLEALLAGLRA 159 (181)
T ss_dssp -HHHHTCCTTCCCTTSCEEEEEESCCSCGGGCSCEECSSSCCBCCCCHHHHHHHHHHHHT
T ss_pred -HHHHCCCCCCCCCCCCEEEEECCCCCEECCCCEEEECCEEECCCCCHHHHHHHHHHHHC
T ss_conf -99819999967899868764221768607898499989873587999999999999986
No 213
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=50.20 E-value=12 Score=16.47 Aligned_cols=29 Identities=7% Similarity=-0.056 Sum_probs=18.1
Q ss_pred CEEEEEEE-CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88999970-588820644334211344320
Q gi|254780477|r 66 PVTMVEYA-SMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 66 ~v~ivef~-D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
+.+|+.|+ ...||+|..-.+.+.+...+.
T Consensus 37 ~~vvl~~~~~~~cp~C~~~~~~l~~~~~~~ 66 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEF 66 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGT
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 729998783236840677767888765442
No 214
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=49.59 E-value=4.5 Score=19.10 Aligned_cols=65 Identities=8% Similarity=0.019 Sum_probs=30.0
Q ss_pred HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH-HHHCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 9987643110000688986405989999999999999-98618853657998989961899999999999
Q gi|254780477|r 154 DALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRA-SEDFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 154 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
..+..+....++.-..++- ..+......+....... ....|...+|-+||||+++-| +++|..+.
T Consensus 20 ~rv~~lL~~~~I~feeiDI-~~d~~~r~e~~~~~~~~~~~~~g~~tvPQIFi~g~~iGG---~del~~~~ 85 (121)
T 1u6t_A 20 QDVLGFLEANKIGFEEKDI-AANEENRKWMRENVPENSRPATGYPLPPQIFNESQYRGD---YDAFFEAR 85 (121)
T ss_dssp HHHHHHHHHTTCCEEEEEC-TTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEEEEE---HHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEC-CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEC---HHHHHHHH
T ss_conf 9999999986996599865-799999999987412101245899766589889989708---99999999
No 215
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=48.70 E-value=12 Score=16.43 Aligned_cols=32 Identities=13% Similarity=0.111 Sum_probs=23.0
Q ss_pred HHCCCCCCCEEEECCEEEC-CCCCHHHHHHHHHH
Q ss_conf 8618853657998989961-89999999999999
Q gi|254780477|r 192 EDFAIDSTPVFFIGGNLYL-GDMSEGVFSKIIDS 224 (232)
Q Consensus 192 ~~~gi~gTPt~~VnG~~~~-g~~~~~~~~~~id~ 224 (232)
++||. .+|.+.|||+... ...+.+++++.|+.
T Consensus 42 ~~Y~~-~VPVl~i~~~~~l~wpFd~~~L~~~L~~ 74 (87)
T 1ttz_A 42 SAYGL-RVPVLRDPMGRELDWPFDAPRLRAWLDA 74 (87)
T ss_dssp HHHTT-TCSEEECTTCCEEESCCCHHHHHHHHHT
T ss_pred HHHCC-CCCEEEECCEEEECCCCCHHHHHHHHHC
T ss_conf 98589-8788998998798585699999999961
No 216
>3kgk_A Arsenical resistance operon trans-acting repressor ARSD; alpha+beta, chaperone, DNA-binding, plasmid, transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=46.62 E-value=13 Score=16.12 Aligned_cols=34 Identities=12% Similarity=0.273 Sum_probs=25.8
Q ss_pred HHHHCCCCCCCEEEECCEEEC-C-CCCHHHHHHHHH
Q ss_conf 998618853657998989961-8-999999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFIGGNLYL-G-DMSEGVFSKIID 223 (232)
Q Consensus 190 ~~~~~gi~gTPt~~VnG~~~~-g-~~~~~~~~~~id 223 (232)
..+..|..+=|-++|||+.+. | +++.++|.+...
T Consensus 64 ~L~~~G~~~LPl~lVDGeiv~~G~YPt~~Ela~~~g 99 (110)
T 3kgk_A 64 FIEASGAEGLPLLLLDGETVMAGRYPKRAELARWFG 99 (110)
T ss_dssp HHHHHCGGGCCEEEETTEEEEESSCCCHHHHHHHHT
T ss_pred HHHHCCCCCCCEEEECCEEEEECCCCCHHHHHHHHC
T ss_conf 999669644898999999999157989999999969
No 217
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=45.80 E-value=14 Score=16.04 Aligned_cols=46 Identities=9% Similarity=-0.047 Sum_probs=30.1
Q ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 16898888999970588820644334211344320000203799843
Q gi|254780477|r 60 IGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILR 106 (232)
Q Consensus 60 ~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~ 106 (232)
+.+=..+|+++.+..=.|++|.+..+.+.+...++ .+.+...+.+.
T Consensus 42 Ls~ykGKVvLIvN~AS~Cg~~~~~y~~L~~L~~ky-~~~gf~Vl~fP 87 (208)
T 2f8a_A 42 LGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRL-GPRGLVVLGFP 87 (208)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHH-GGGTEEEEEEE
T ss_pred HHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH-CCCCCEEEECC
T ss_conf 89949988999984067788777899999999985-33896798436
No 218
>3hvv_A Thiol peroxidase, scavengase P20; oxidoreductase, TPX, peroxiredoxin, antioxidant; 1.75A {Escherichia coli k-12} PDB: 3hvs_A* 1qxh_A* 3i43_A* 3hvx_A
Probab=45.76 E-value=14 Score=16.03 Aligned_cols=36 Identities=17% Similarity=0.081 Sum_probs=21.1
Q ss_pred CCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHHHH
Q ss_conf 4116898888999970-58882064433421134432
Q gi|254780477|r 58 VSIGQKDAPVTMVEYA-SMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~-D~~Cp~C~~~~~~~~~~l~~ 93 (232)
+.+.+-..+.+|+.|+ .-.||.|....+.+.+...+
T Consensus 37 vsLsd~~Gk~vVl~f~p~~~~p~C~~e~~~~~~~~~~ 73 (167)
T 3hvv_A 37 VTLGQFAGKRKVLNIFPSIDTGVSAASVRKFNQLATE 73 (167)
T ss_dssp EEGGGGTTSEEEEEECSCTTSTTHHHHHHHHHHHGGG
T ss_pred EEHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 8479969985999983677877677516778999997
No 219
>3ktb_A Arsenical resistance operon trans-acting repressor; alpha-beta-alpha sandwich, helix-turn-helix, structural genomics, PSI-2; 2.10A {Bacteroides vulgatus atcc 8482}
Probab=41.74 E-value=16 Score=15.64 Aligned_cols=33 Identities=12% Similarity=0.211 Sum_probs=25.6
Q ss_pred HHHHCCCCCCCEEEECCEEEC-C-CCCHHHHHHHH
Q ss_conf 998618853657998989961-8-99999999999
Q gi|254780477|r 190 ASEDFAIDSTPVFFIGGNLYL-G-DMSEGVFSKII 222 (232)
Q Consensus 190 ~~~~~gi~gTPt~~VnG~~~~-g-~~~~~~~~~~i 222 (232)
..++.|..+=|-++|||+.+. | +++.++|.+.+
T Consensus 67 ~L~~~G~e~LPltlVDGeiv~~G~YPt~~Ela~~~ 101 (106)
T 3ktb_A 67 FLQKHGADALPITLVDGEIAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp HHHTTCGGGCSEEEETTEEEECSSCCCHHHHHHHH
T ss_pred HHHHCCCCCCCEEEECCEEEEECCCCCHHHHHHHH
T ss_conf 99965965489899999998806798999999996
No 220
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=41.71 E-value=16 Score=15.64 Aligned_cols=29 Identities=14% Similarity=0.093 Sum_probs=19.1
Q ss_pred CEEEEEEE-CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88999970-588820644334211344320
Q gi|254780477|r 66 PVTMVEYA-SMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 66 ~v~ivef~-D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
+++|+.|+ .-.||+|....+.+.+...+.
T Consensus 45 K~vVl~f~~~~~~p~C~~~~~~l~~~~~~~ 74 (167)
T 2jsy_A 45 KVTIISVIPSIDTGVCDAQTRRFNEEAAKL 74 (167)
T ss_dssp SCEEEEECSCSTTSHHHHTHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 759999666325564560378999999986
No 221
>2e84_A High-molecular-weight cytochrome C; cytochrome C3 motifs, electron transport; HET: HEM; 2.70A {Desulfovibrio vulgaris str}
Probab=40.23 E-value=9.1 Score=17.17 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 002768999999999999999874157766
Q gi|254780477|r 2 VMSTTRIGVLGGIVLLFIASYFFYTRKGSA 31 (232)
Q Consensus 2 ~~~~~ri~~l~~~~~~~~~~~~~~~~~~~~ 31 (232)
||+-+|+..++++++++++++++.......
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (556)
T 2e84_A 1 MMNAKSLLRWAGALVAVAAVTVFGLDARGT 30 (556)
T ss_dssp ------------------------------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 987313788889999999998888886103
No 222
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=39.57 E-value=17 Score=15.43 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=21.9
Q ss_pred CCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 116898888999970-588820644334211344320
Q gi|254780477|r 59 SIGQKDAPVTMVEYA-SMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 59 ~~G~~~A~v~ivef~-D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.+-+-..+.+|+.|+ .-.||.|....+.+.....+.
T Consensus 36 sL~d~~Gk~~Vl~f~~~~~cp~C~~e~~~l~~~~~~~ 72 (163)
T 1psq_A 36 SLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL 72 (163)
T ss_dssp EGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred EHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 5899099879999833775760333299999998741
No 223
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus, orthopox; 2.50A {Vaccinia virus}
Probab=37.03 E-value=19 Score=15.18 Aligned_cols=38 Identities=11% Similarity=0.226 Sum_probs=25.1
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 8899997058882064433421134432000020379984332
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREF 108 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 108 (232)
|-|++.|.-+.|+-|+..+..+ ..+.+.| .+..+...-
T Consensus 2 K~tLILfGKPlC~vCe~~s~~l-~~LedeY----~ilrVNIlS 39 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAV-EELKSEY----DILHVDILS 39 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHH-HTTTTTE----EEEEEECCC
T ss_pred CCEEEEECCCCCHHHHHHHHHH-HHHHCCC----CEEEEEEEE
T ss_conf 7369995796627899899999-9851535----479988622
No 224
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.15 E-value=7.4 Score=17.73 Aligned_cols=20 Identities=25% Similarity=0.364 Sum_probs=14.3
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q ss_conf 88820644334211344320
Q gi|254780477|r 75 MTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 75 ~~Cp~C~~~~~~~~~~l~~~ 94 (232)
+.||||-.++..-.+.+.++
T Consensus 10 ~KCPyCd~~F~kng~DLq~H 29 (37)
T 2elp_A 10 MKCPYCDFYFMKNGSDLQRH 29 (37)
T ss_dssp EECSSSSCEECSSCHHHHHH
T ss_pred CCCCCHHHHHHHCCHHHHHH
T ss_conf 14870168885056789999
No 225
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=27.64 E-value=27 Score=14.20 Aligned_cols=29 Identities=7% Similarity=-0.033 Sum_probs=17.6
Q ss_pred CCEEEEEEE--CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 888999970--588820644334211344320
Q gi|254780477|r 65 APVTMVEYA--SMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 65 A~v~ivef~--D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
.++ |+.|| --.||+|....+.+.+...+.
T Consensus 35 ~~~-vv~ff~p~~~cp~C~~e~~~~~~~~~~~ 65 (159)
T 2a4v_A 35 NRV-VVFFVYPRASTPGSTRQASGFRDNYQEL 65 (159)
T ss_dssp CSE-EEEEECSSSSSHHHHHHHHHHHHHHHHH
T ss_pred CCE-EEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 768-9998378998997448999999889986
No 226
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=25.62 E-value=21 Score=14.86 Aligned_cols=18 Identities=11% Similarity=0.244 Sum_probs=13.9
Q ss_pred EEEEEECCCCCCHHHHHH
Q ss_conf 999970588820644334
Q gi|254780477|r 68 TMVEYASMTCFHCAEFHN 85 (232)
Q Consensus 68 ~ivef~D~~Cp~C~~~~~ 85 (232)
+++.|....||||++..-
T Consensus 6 ~m~Ly~~~~sp~~~rv~i 23 (216)
T 3lyk_A 6 VMTLFSNKDDIYCHQVKI 23 (216)
T ss_dssp CEEEEECTTCHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHH
T ss_conf 267766999868999999
No 227
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=24.65 E-value=30 Score=13.88 Aligned_cols=16 Identities=19% Similarity=0.733 Sum_probs=12.4
Q ss_pred EEEEEEE---CCCCCCHHH
Q ss_conf 8999970---588820644
Q gi|254780477|r 67 VTMVEYA---SMTCFHCAE 82 (232)
Q Consensus 67 v~ivef~---D~~Cp~C~~ 82 (232)
+..+.|+ ++.|+||..
T Consensus 20 ~r~~vf~~GCN~~C~~C~n 38 (245)
T 3c8f_A 20 IRFITFFQGCLMRCLYCHN 38 (245)
T ss_dssp EEEEEEESCCSCCCTTCSC
T ss_pred CEEEEECCCCCCCCCCCCC
T ss_conf 3899987874788989997
No 228
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Probab=24.42 E-value=23 Score=14.64 Aligned_cols=17 Identities=24% Similarity=0.172 Sum_probs=12.9
Q ss_pred EEEEEECCCCCCHHHHH
Q ss_conf 99997058882064433
Q gi|254780477|r 68 TMVEYASMTCFHCAEFH 84 (232)
Q Consensus 68 ~ivef~D~~Cp~C~~~~ 84 (232)
|++-|....||+|++..
T Consensus 2 ~~~LY~~~~sp~~~kv~ 18 (218)
T 1r5a_A 2 TTVLYYLPASPPCRSVL 18 (218)
T ss_dssp CEEEEECTTCHHHHHHH
T ss_pred CEEEECCCCCHHHHHHH
T ss_conf 26998279987799999
No 229
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=24.31 E-value=18 Score=15.33 Aligned_cols=19 Identities=5% Similarity=-0.038 Sum_probs=15.2
Q ss_pred EEEEEECCCCCCHHHHHHH
Q ss_conf 9999705888206443342
Q gi|254780477|r 68 TMVEYASMTCFHCAEFHNK 86 (232)
Q Consensus 68 ~ivef~D~~Cp~C~~~~~~ 86 (232)
+++.|.++.||+|++..--
T Consensus 8 ~~~lY~~p~sp~~~rv~l~ 26 (215)
T 3lyp_A 8 RLACYSDPADHYSHRVRIV 26 (215)
T ss_dssp CCEEEECTTCHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHH
T ss_conf 8688799998689999999
No 230
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, PSI, MCSG, protein structure initiative; 2.10A {Methanosarcina mazei GO1}
Probab=23.87 E-value=31 Score=13.76 Aligned_cols=25 Identities=24% Similarity=0.635 Sum_probs=17.9
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 88889999705888206443342113
Q gi|254780477|r 64 DAPVTMVEYASMTCFHCAEFHNKTFK 89 (232)
Q Consensus 64 ~A~v~ivef~D~~Cp~C~~~~~~~~~ 89 (232)
+-|| ++-|.-..|++|+.++.+.+.
T Consensus 39 ~Kpi-fl~ig~~~C~wC~vm~~etf~ 63 (173)
T 3ira_A 39 NKPV-FLSIGYSTCHWCHMMAHESFE 63 (173)
T ss_dssp TCCE-EEEEECTTCHHHHHHHHHTTT
T ss_pred CCCE-EEEEECCCCHHHHHHHHHHCC
T ss_conf 9918-999741767788998887418
No 231
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=23.10 E-value=32 Score=13.67 Aligned_cols=29 Identities=14% Similarity=0.024 Sum_probs=17.7
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88999970588820644334211344320
Q gi|254780477|r 66 PVTMVEYASMTCFHCAEFHNKTFKYLEDK 94 (232)
Q Consensus 66 ~v~ivef~D~~Cp~C~~~~~~~~~~l~~~ 94 (232)
++.|..|-.-.||+|....+.+.....++
T Consensus 45 ~vVl~f~p~~~tp~C~~e~~~l~~~~~~~ 73 (165)
T 1q98_A 45 RKVLNIFPSIDTGVCATSVRKFNQQAAKL 73 (165)
T ss_dssp EEEEEECSCSCSSCCCHHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 79999776467675456689899999985
No 232
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreductase; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=22.80 E-value=33 Score=13.63 Aligned_cols=34 Identities=3% Similarity=-0.219 Sum_probs=21.0
Q ss_pred CCEEEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 888999970-5888206443342113443200002
Q gi|254780477|r 65 APVTMVEYA-SMTCFHCAEFHNKTFKYLEDKYIKT 98 (232)
Q Consensus 65 A~v~ivef~-D~~Cp~C~~~~~~~~~~l~~~~~~~ 98 (232)
.+.+|+.|+ .-.||+|..--+.+.+..++.....
T Consensus 35 Gk~vVl~F~p~~~~p~C~~e~~~l~~~~~~~~~~g 69 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG 69 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 89699999667779862899999986556540477
No 233
>2auv_A Potential NAD-reducing hydrogenase subunit; thioredoxin, thiordoxin-like, oxidoreductase; NMR {Desulfovibrio fructosovorans}
Probab=20.92 E-value=13 Score=16.16 Aligned_cols=26 Identities=23% Similarity=0.588 Sum_probs=20.0
Q ss_pred CCCEEEECCEEECCCCCHHHHHHHHHH
Q ss_conf 365799898996189999999999999
Q gi|254780477|r 198 STPVFFIGGNLYLGDMSEGVFSKIIDS 224 (232)
Q Consensus 198 gTPt~~VnG~~~~g~~~~~~~~~~id~ 224 (232)
.-|.+.|||+.+. ..+++.+.++|++
T Consensus 59 ~aP~v~id~~~y~-~vt~e~v~~il~~ 84 (85)
T 2auv_A 59 LAPIVMVGEKVYG-NVTPGQVKKILAE 84 (85)
T ss_dssp TSCCCEEGGGCCC-CSSSSHHHHHHHH
T ss_pred CCCEEEECCEEEC-CCCHHHHHHHHHH
T ss_conf 9998999999877-8899999999971
No 234
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=20.81 E-value=36 Score=13.38 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=29.8
Q ss_pred CCCCCCCCCEEEEEEECCCCCC-HHHHHHHHHHHHHHHCCC-CCEEEEEECCC
Q ss_conf 4116898888999970588820-644334211344320000-20379984332
Q gi|254780477|r 58 VSIGQKDAPVTMVEYASMTCFH-CAEFHNKTFKYLEDKYIK-TGKLRYILREF 108 (232)
Q Consensus 58 ~~~G~~~A~v~ivef~D~~Cp~-C~~~~~~~~~~l~~~~~~-~~~~~~~~~~~ 108 (232)
..+-+-..+++|+.|+=..||. |...-..+.....+.... ...+.++....
T Consensus 28 ~~l~d~~Gk~~vl~F~yt~Cp~~Cp~~~~~l~~~~~~l~~~~~~~v~~l~isv 80 (172)
T 2k6v_A 28 VRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSV 80 (172)
T ss_dssp EEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEES
T ss_pred EEHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 95699699889999988889985879999999887653331366458997048
No 235
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein- like 3; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=20.04 E-value=37 Score=13.28 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=18.6
Q ss_pred CCCCCCEEEECCEEECCCCCHHHHHHHHH
Q ss_conf 88536579989899618999999999999
Q gi|254780477|r 195 AIDSTPVFFIGGNLYLGDMSEGVFSKIID 223 (232)
Q Consensus 195 gi~gTPt~~VnG~~~~g~~~~~~~~~~id 223 (232)
+-+..|.+||||+.+-| ++++..+.+
T Consensus 57 ~~~tvPqIfi~~~~iGg---~del~~l~e 82 (93)
T 1t1v_A 57 PKATPPQIVNGNHYCGD---YELFVEAVE 82 (93)
T ss_dssp TTCCSCEEEETTEEEEE---HHHHHHHHH
T ss_pred CCCCCCEEEECCEEEEC---HHHHHHHHH
T ss_conf 88838999999999975---999999997
Done!