HHsearch alignment for GI: 254780478 and conserved domain: PRK00111
>PRK00111 hypothetical protein; Provisional.
Probab=99.68 E-value=1e-16 Score=123.45 Aligned_cols=94 Identities=22% Similarity=0.261 Sum_probs=77.0
Q ss_pred CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCEEEEEECC-CHHHHH
Q ss_conf 1189889999999998405468899962666310899943111213305544444333456788379999359-069999
Q gi|254780478|r 2 IHFSQVIDDLLDPFLRRRAGISMSLVSAWSEIVGSNIARCCRPEKIIWPNRTSIERQDISSDVSGTLIIACEG-SHALFL 80 (161)
Q Consensus 2 ~~ls~ll~~~i~~~~~krg~~~~~l~~~W~~IVG~~~A~~~~P~ki~~~~~~~~~~~~~~~~~~g~L~i~v~~-~~a~el 80 (161)
T Consensus 65 ~~lGa~~~rlI~~RGW~~~vA~G~V~~~W~~IVG~eIA~H~~P~s~~----------------DG~L~V~~dSTAWATQL 128 (178)
T PRK00111 65 ESLGSVLNKEIQRRGWGKDIAGGWVTSNWEELVGAKIAQHTRVEMIK----------------DKKLFITCDSTAWATNL 128 (178)
T ss_pred CCHHHHHHHHHHHCCCCCCCCCEEHHCCCHHHHCHHHHCCCCEEEEE----------------CCEEEEEECCHHHHHHH
T ss_conf 76789999999975986564411031362366595665347315751----------------88799996888999999
Q ss_pred HHHHHHHHHHHHHHHCHHHHHEEEEEECCCCC
Q ss_conf 99899999999986273100025778557784
Q gi|254780478|r 81 MHDQSKIIRNVNIFFGFCAIKRIRFLQRSMSI 112 (161)
Q Consensus 81 ~~~~~~Ii~riN~~~G~~aI~~I~~~q~~~~~ 112 (161)
T Consensus 129 RlL~~~LL~~I~~~lG~~vV~~I~V-~GP~aP 159 (178)
T PRK00111 129 RMMQRQILQVIAEKVGPNIITELRI-FGPQAP 159 (178)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEE-ECCCCC
T ss_conf 9999999999998838984689999-898999