BLAST/PSIBLAST alignment of GI: 254780478 and GI: 116250852 at iteration 1
>gi|116250852|ref|YP_766690.1| hypothetical protein RL1079 [Rhizobium leguminosarum bv. viciae 3841] Length = 165
>gi|115255500|emb|CAK06576.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 165
 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 5/155 (3%)

Query: 3   HFSQVIDDLLDPFLRRRAGISMSLVSAWSEIVGSNIARCCRPEKIIWPNRTSIERQDISS 62
             S++ + L+DP L RRAGI+ +L+ +WSEI G + A C RPEKI W         +   
Sbjct: 10  QISELANGLIDPVLARRAGINTALLGSWSEIAGEDFADCTRPEKIAWARGGD----ETGG 65

Query: 63  DVSGTLIIACEGSHALFLMHDQSKIIRNVNIFFGFCAIKRIRFLQRSMSIVNQAPSVSIP 122
              G L IACEG+ ALFL H Q ++I+ +N FFGF A+ +IR +Q+ +S   +  S + P
Sbjct: 66  FRPGVLTIACEGARALFLTHAQGELIQRINSFFGFAAVHQIRIVQKPVSQAIRR-SRTPP 124

Query: 123 ALEKDDCEKIDKMTEGIKDEQLKRALIRFGHAVVG 157
            L+ +   K++ M EGI++++L++A+ R G AV+G
Sbjct: 125 PLKGEAARKLEGMMEGIENDKLRQAIQRLGTAVMG 159