HHsearch alignment for GI: 254780479 and conserved domain: PRK01229

>PRK01229 N-glycosylase/DNA lyase; Provisional.
Probab=96.13  E-value=0.0075  Score=40.59  Aligned_cols=115  Identities=21%  Similarity=0.213  Sum_probs=76.5

Q ss_pred             HHHHHHHHHH----HHCCHHHCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCC--CHH-HHHHHHHHHHHHH------H
Q ss_conf             4676644673----1161203326589987748997898729989999997404--634-5889998776754------3
Q gi|254780479|r   40 YKVWISEIML----QQTTVKTVEPYFKKFMQKWPTIFCLSSAKDEEILSAWAGL--GYY-TRARNLKKCADII------V  106 (356)
Q Consensus        40 y~v~vseiml----qqT~v~~v~~~~~~~~~~~P~~~~la~a~~~~vl~~w~gL--Gyy-~Rar~l~~~a~~i------~  106 (356)
T Consensus        34 e~~iF~EL~FCILTanssA~~~~ka~-~~l~-----~g~~~~~~eel~~~l~~~g~RF~n~rAkyIv~aR~~~~~lk~i~  107 (208)
T PRK01229         34 EEDLFSELSFCILTANSSAEGGIKAQ-KEIG-----DGFLYLSEEELREKLKEVGHRFPNLRAEYIVEARKLIGKLKEII  107 (208)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHH-HHHH-----HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88999999999938874077899999-9987-----40025999999999998496784226899999999988999999


Q ss_pred             HCCCCCCCCHHHHHHH-HHHHHHHHHHHHH-HHHCCCEEEECCCCHHHHHHHHHCCCC
Q ss_conf             0057868731456888-8877787766776-643496313124314666576519754
Q gi|254780479|r  107 KKYEGNFPHKVEILKK-LPGIGDYTASAIV-AIAFNHFAVVVDTNIERIISRYFDIIK  162 (356)
Q Consensus       107 ~~~~g~~P~~~~~l~~-LpGiG~yta~ai~-s~a~~~~~~~vD~Nv~RVl~R~~~~~~  162 (356)
T Consensus       108 ~~~-~~~~e~Re~Lv~nIKG~G~KEASHFLRNiG~-~dlAIlDrHILr~l~~~g~i~~  163 (208)
T PRK01229        108 KAD-KDQFEAREFLVKNIKGIGYKEASHFLRNVGF-EDLAILDRHILRFLKRYGLIKE  163 (208)
T ss_pred             HCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCCCCC
T ss_conf             706-8778999999985647667999999996585-2357769999999998289765