HHsearch alignment for GI: 254780479 and conserved domain: PRK10702
>PRK10702 endonuclease III; Provisional.
Probab=100.00 E-value=0 Score=436.32 Aligned_cols=202 Identities=23% Similarity=0.310 Sum_probs=181.6
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCH
Q ss_conf 99999962899887548554445678704676644673116120332658998774899789872998999999740463
Q gi|254780479|r 12 ILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVEPYFKKFMQKWPTIFCLSSAKDEEILSAWAGLGY 91 (356)
Q Consensus 12 ll~w~~~~~R~lpwr~~~~~~~~~~~~py~v~vseimlqqT~v~~v~~~~~~~~~~~P~~~~la~a~~~~vl~~w~gLGy 91 (356)
T Consensus 6 ~~~i~~~l~~~~p~~~~----~l~~~~P~~vLVs~ILsqqTtd~~v~~~~~~L~~~~~t~e~la~a~~~el~~~i~~~G~ 81 (211)
T PRK10702 6 RLEILTRLRDNNPHPTT----ELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGL 81 (211)
T ss_pred HHHHHHHHHHHCCCCCC----CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999987869999----85889858999999997418589999999999997799999870999999999998635
Q ss_pred H-HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 4-588999877675430057868731456888887778776677664349631312431466657651975457356899
Q gi|254780479|r 92 Y-TRARNLKKCADIIVKKYEGNFPHKVEILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIKPAPLYHKT 170 (356)
Q Consensus 92 y-~Rar~l~~~a~~i~~~~~g~~P~~~~~l~~LpGiG~yta~ai~s~a~~~~~~~vD~Nv~RVl~R~~~~~~~~~~~~k~ 170 (356)
T Consensus 82 y~~KA~~L~~~a~~i~~~~~G~vP~~~~~L~~LpGIG~kTA~aIl~~a~~~~~~~VDtnV~RV~~Rlg~~~~~---~~~~ 158 (211)
T PRK10702 82 YNSKAENVIKTCRILLEKHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGK---NVEQ 158 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC---CHHH
T ss_conf 9999999999999999990998766699999876635889999999984998652573599999997657789---9999
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
Q ss_conf 98741025785226789999999986320412356431100000134310
Q gi|254780479|r 171 IKNYARKITSTSRPGDFVQAMMDLGALICTSNKPLCPLCPIQKNCLTFSE 220 (356)
Q Consensus 171 l~~~~~~~~~~~~~~~~nQAlMdlGa~iC~p~~P~C~~Cpl~~~C~~~~~ 220 (356)
T Consensus 159 ~~~~l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C~~Cpl~~~C~~~~K 208 (211)
T PRK10702 159 VEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEK 208 (211)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999982890237999999999950150699993999989144999666