HHsearch alignment for GI: 254780479 and conserved domain: cd02883
>cd02883 Nudix_Hydrolase Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzy
Probab=97.83 E-value=0.00025 Score=51.04 Aligned_cols=104 Identities=18% Similarity=0.226 Sum_probs=65.7
Q ss_pred EEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEC--CCEEEEEEE------EEEEEEEE
Q ss_conf 0003413760577645720132047442111134672158886301010000213--735899831------59999999
Q gi|254780479|r 242 VFIAITNDNRILLRKRTNTRLLEGMDELPGSAWSSTKDGNIDTHSAPFTANWILC--NTITHTFTH------FTLTLFVW 313 (356)
Q Consensus 242 ~~vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~~~~~~~~~~~~~~~~l--~~ikH~fTH------~~L~i~v~ 313 (356)
T Consensus 4 ~~ii~~~~~~vLl~~r~~~--~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f 81 (123)
T cd02883 4 GAVILDEDGRVLLVRRADS--PGGLWELPGGGVEPGETLEEAAIREVREETGLDVDVLRLLGVYEVESPDEGEHAVVFVF 81 (123)
T ss_pred EEEEEECCCEEEEEEECCC--CCCEEECCCEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCCCCEEEEEEE
T ss_conf 9999979999999994289--98959998143159989899756678898594567758999999877789966999999
Q ss_pred EEECCCC-------CCCCCCEEECHHHHHHCCCCHHHHHHH
Q ss_conf 9980776-------766781332278887479987899999
Q gi|254780479|r 314 KTIVPQI-------VIIPDSTWHDAQNLANAALPTVMKKAL 347 (356)
Q Consensus 314 ~~~~~~~-------~~~~~~~Wv~~~el~~~~LPs~~kKIL 347 (356)
T Consensus 82 ~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~ 122 (123)
T cd02883 82 LARLVGGEPTLLPPDEISEVRWVTLDELPALALSPALRPAL 122 (123)
T ss_pred EEEECCCCCCCCCCCCEEEEEEEEHHHHHCCCCCHHHHHHH
T ss_conf 99995895212898668999998499913499983675965