HHsearch alignment for GI: 254780479 and conserved domain: cd03426

>cd03426 CoAse Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.
Probab=96.48  E-value=0.012  Score=39.28  Aligned_cols=87  Identities=16%  Similarity=0.143  Sum_probs=56.1

Q ss_pred             CCEEEEEECCCC-HHHHCCCCCCCCCCCCC-CCHH------HHHHCCCCCCCCEECCCEEEEEEEEEEEEEEEEEECCCC
Q ss_conf             760577645720-13204744211113467-2158------886301010000213735899831599999999980776
Q gi|254780479|r  249 DNRILLRKRTNT-RLLEGMDELPGSAWSST-KDGN------IDTHSAPFTANWILCNTITHTFTHFTLTLFVWKTIVPQI  320 (356)
Q Consensus       249 ~~kiLL~KRp~~-gll~GLwEFP~~e~~~~-~~~~------~~~~~~~~~~~~~~l~~ikH~fTH~~L~i~v~~~~~~~~  320 (356)
T Consensus        15 ~~~ill~kRs~~l~~h~GqisfPGG~~e~~D~~~~~tAlREt~EEiGl~~~~~~~lg~L~~~~t~s~~~V~PfV~~~~~~   94 (157)
T cd03426          15 ELRVLLTKRASHLRSHPGQVAFPGGKVDPGDEDPVATALREAEEEIGLPPDSVEVLGRLPPYYTRSGFVVTPVVGLVPPP   94 (157)
T ss_pred             CEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCC
T ss_conf             67999998267667789848379960276653389999999999868991133898634871325984899999994798


Q ss_pred             C-------CCCCCEEECHHHHH
Q ss_conf             7-------66781332278887
Q gi|254780479|r  321 V-------IIPDSTWHDAQNLA  335 (356)
Q Consensus       321 ~-------~~~~~~Wv~~~el~  335 (356)
T Consensus        95 ~~~~~~~~EV~~vf~vPL~~ll  116 (157)
T cd03426          95 LPLVLNPDEVAEVFEVPLSFLL  116 (157)
T ss_pred             CCCCCCHHHHHHHHHCCHHHHH
T ss_conf             7657984897888140599973