HHsearch alignment for GI: 254780479 and conserved domain: cd04672

>cd04672 Nudix_Hydrolase_14 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=97.72  E-value=8.8e-05  Score=54.18  Aligned_cols=102  Identities=11%  Similarity=0.108  Sum_probs=59.2

Q ss_pred             EEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCE------ECCCEEEEEEE-----EEEEE
Q ss_conf             00034137605776457201320474421111346721588863010100002------13735899831-----59999
Q gi|254780479|r  242 VFIAITNDNRILLRKRTNTRLLEGMDELPGSAWSSTKDGNIDTHSAPFTANWI------LCNTITHTFTH-----FTLTL  310 (356)
Q Consensus       242 ~~vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~~~~~~~~~~~~~~~------~l~~ikH~fTH-----~~L~i  310 (356)
T Consensus         6 ~~vv~-~dg~vLL~rr~~~----g~W~lPGG~ve~gEt~~eaa~REv~EETGl~v~~~~l~~v~~~~~~~~~~~~~~~~~   80 (123)
T cd04672           6 RAAIF-KDGKILLVREKSD----GLWSLPGGWADVGLSPAENVVKEVKEETGLDVKVRKLAAVDDRNKHHPPPQPYQVYK   80 (123)
T ss_pred             EEEEE-ECCEEEEEEECCC----CEEECCCEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCEEEEE
T ss_conf             99999-8999999998899----939898466379989999999999997790999858999983543279995249999


Q ss_pred             EEEEEECCC-----CCCCCCCEEECHHHHHHCCCCHHHHHHHH
Q ss_conf             999998077-----67667813322788874799878999998
Q gi|254780479|r  311 FVWKTIVPQ-----IVIIPDSTWHDAQNLANAALPTVMKKALS  348 (356)
Q Consensus       311 ~v~~~~~~~-----~~~~~~~~Wv~~~el~~~~LPs~~kKIL~  348 (356)
T Consensus        81 ~~f~~~~~~g~~~~~~E~~e~~Wf~~deLP~L~~~~~t~~~i~  123 (123)
T cd04672          81 LFFLCEILGGEFKPNIETSEVGFFALDDLPPLSEKRNTEEQIE  123 (123)
T ss_pred             EEEEEEECCCCCCCCCHHHEEEEECHHHCCCCCCCCCCHHHHC
T ss_conf             9999998789388894564367988889987875698979919