HHsearch alignment for GI: 254780479 and conserved domain: cd04683

>cd04683 Nudix_Hydrolase_24 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=98.10  E-value=1.9e-05  Score=58.93  Aligned_cols=100  Identities=16%  Similarity=0.233  Sum_probs=61.6

Q ss_pred             EEEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEECC--C--EE---EEEEE--EEEEEE
Q ss_conf             200034137605776457201320474421111346721588863010100002137--3--58---99831--599999
Q gi|254780479|r  241 AVFIAITNDNRILLRKRTNTRLLEGMDELPGSAWSSTKDGNIDTHSAPFTANWILCN--T--IT---HTFTH--FTLTLF  311 (356)
Q Consensus       241 ~~~vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~~~~~~~~~~~~~~~~l~--~--ik---H~fTH--~~L~i~  311 (356)
T Consensus         2 av~vvl~~~~~vLL~~R~~~~~~~G~W~~PGG~ve~GEt~~~aa~REl~EEtGl~v~~~~l~~~~~~~~~~~~~~~~~~~   81 (120)
T cd04683           2 AVYVLLRRDDEVLLQRRANTGYMDGQWALPAGHLEKGEDAVTAAVREAREEIGVTLDPEDLRLAHTMHRRTEDIESRIGL   81 (120)
T ss_pred             EEEEEEEECCEEEEEECCCCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHCCEEEECEEEEEEEEECCCCCCCEEEEE
T ss_conf             89999993999999977899999997989758877999999999999888769388734089999883268998799999


Q ss_pred             EEEEECC-------CCCCCCCCEEECHHHHHHCCCC
Q ss_conf             9999807-------7676678133227888747998
Q gi|254780479|r  312 VWKTIVP-------QIVIIPDSTWHDAQNLANAALP  340 (356)
Q Consensus       312 v~~~~~~-------~~~~~~~~~Wv~~~el~~~~LP  340 (356)
T Consensus        82 ~f~~~~~~g~p~~~~p~e~~~~~Wf~~deLP~~~~~  117 (120)
T cd04683          82 FFTVRRWSGEPRNCEPDKCAELRWFPLDALPDDTVD  117 (120)
T ss_pred             EEEEEEECCEEECCCCCCEEEEEEECHHHCCCCCCC
T ss_conf             999997478986189981458999998899886577