HHsearch alignment for GI: 254780479 and conserved domain: cd04691
>cd04691 Nudix_Hydrolase_32 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=98.57 E-value=2.6e-07 Score=71.95 Aligned_cols=93 Identities=14% Similarity=0.246 Sum_probs=61.9
Q ss_pred EEEEEEECCCEEEEEECC-CCHHHHCCCCCCCCCCCCCCCHHHHHHCCCC------CCCCEECCCEEEEEEEEEEEEEEE
Q ss_conf 200034137605776457-2013204744211113467215888630101------000021373589983159999999
Q gi|254780479|r 241 AVFIAITNDNRILLRKRT-NTRLLEGMDELPGSAWSSTKDGNIDTHSAPF------TANWILCNTITHTFTHFTLTLFVW 313 (356)
Q Consensus 241 ~~~vii~~~~kiLL~KRp-~~gll~GLwEFP~~e~~~~~~~~~~~~~~~~------~~~~~~l~~ikH~fTH~~L~i~v~ 313 (356)
T Consensus 3 Vagii~-~~~kvLl~rR~~~~~~~~G~WefPGGkvE~gEt~~~Al~REl~EElgI~v~~~~~~~~~~~~~~~~~~-l~~~ 80 (117)
T cd04691 3 VVGVLF-SDDKVLLERRSLTKNADPGKLNIPGGHIEAGESQEEALLREVQEELGVDPLSYTYLCSLYHPTSELQL-LHYY 80 (117)
T ss_pred EEEEEE-ECCEEEEEECCCCCCCCCCEEECCEECCCCCCCHHHHHHHHHHHHHCEEEECCEEEEEEEECCCCEEE-EEEE
T ss_conf 999999-89999999889999999996989745177988999999999889819156224589999855999699-9999
Q ss_pred EEEC----CCCCCCCCCEEECHHHHH
Q ss_conf 9980----776766781332278887
Q gi|254780479|r 314 KTIV----PQIVIIPDSTWHDAQNLA 335 (356)
Q Consensus 314 ~~~~----~~~~~~~~~~Wv~~~el~ 335 (356)
T Consensus 81 ~~~~~~G~~~~~E~~e~~Wv~~~el~ 106 (117)
T cd04691 81 VVTFWQGEIPAQEAAEVHWMTANDIV 106 (117)
T ss_pred EEEEECCEECCCCCCCCEECCHHHCC
T ss_conf 99998176643347705771699953