HHsearch alignment for GI: 254780479 and conserved domain: pfam00633
>pfam00633 HHH Helix-hairpin-helix motif. The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.
Probab=97.50 E-value=2.9e-05 Score=57.54 Aligned_cols=30 Identities=43% Similarity=0.605 Sum_probs=27.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 057868731456888887778776677664
Q gi|254780479|r 108 KYEGNFPHKVEILKKLPGIGDYTASAIVAI 137 (356)
Q Consensus 108 ~~~g~~P~~~~~l~~LpGiG~yta~ai~s~ 137 (356)
T Consensus 1 ~~~~~~~as~eeL~~lpGVG~~tA~~I~~~ 30 (30)
T pfam00633 1 SLEGLIPASREELLALPGVGPKTAEAILSY 30 (30)
T ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHCC
T ss_conf 964435235999972889776889988539