HHsearch results for GI: 254780479 and protein with PDBid: 2h56_A
>2h56_A DNA-3-methyladenine glycosidase; 10174367, EC 3.2.2.-, structural genomics, PSI-2, protein structure initiative; 2.55A {Bacillus halodurans}
Probab=99.35 E-value=6.4e-12 Score=102.95 Aligned_cols=140 Identities=17% Similarity=0.254 Sum_probs=110.7
Q ss_pred CCHHHHHHHHHHHHHCCHHHCCHHHHHHHHH----CCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC--
Q ss_conf 8704676644673116120332658998774----8997898729989999997404634588999877675430057--
Q gi|254780479|r 37 PSPYKVWISEIMLQQTTVKTVEPYFKKFMQK----WPTIFCLSSAKDEEILSAWAGLGYYTRARNLKKCADIIVKKYE-- 110 (356)
Q Consensus 37 ~~py~v~vseimlqqT~v~~v~~~~~~~~~~----~P~~~~la~a~~~~vl~~w~gLGyy~Rar~l~~~a~~i~~~~~-- 110 (356)
.|||..+|.-|.-||..++.....|.|+.++ ||+++.+++++++++..+ ||+ +++++.++..|+.+.+...
T Consensus 49 ~d~Fe~Lv~~Ii~QQiS~~aA~ti~~Rl~~~~G~~~p~p~~l~~~~~~~Lr~~--Gls-~~K~~~i~~la~~~~~g~~~~ 125 (233)
T 2h56_A 49 PNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGGALEKPEQLYRVSDEALRQA--GVS-KRKIEYIRHVCEHVESGRLDF 125 (233)
T ss_dssp SCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTSCCCCTHHHHTSCHHHHHHT--TCC-HHHHHHHHHHHHHHHTTSSCH
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHC--CCC-HHHHHHHHHHHHHHHHCCCCC
T ss_conf 99899999999818314999999999999994899999688862999999777--997-878999999999998177520
Q ss_pred ---CCCCC--HHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEC-CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf ---86873--145688888777877667766434963-1312-43146665765197545735689998741025785
Q gi|254780479|r 111 ---GNFPH--KVEILKKLPGIGDYTASAIVAIAFNHF-AVVV-DTNIERIISRYFDIIKPAPLYHKTIKNYARKITST 181 (356)
Q Consensus 111 ---g~~P~--~~~~l~~LpGiG~yta~ai~s~a~~~~-~~~v-D~Nv~RVl~R~~~~~~~~~~~~k~l~~~~~~~~~~ 181 (356)
...+. -.+.|+++||||+.||..|+-|+++.+ +.++ |..|+|.+.++++..... .++.+..+++.+-|-
T Consensus 126 ~~l~~~~~~e~~~~L~~ikGIGpWTA~~illf~lgr~DvfP~~Dl~l~ra~~~ly~~~~~~--~~~~~~~~ae~w~Py 201 (233)
T 2h56_A 126 TELEGAEATTVIEKLTAIKGIGQWTAEMFMMFSLGRLDVLSVGDVGLQRGAKWLYGNGEGD--GKKLLIYHGKAWAPY 201 (233)
T ss_dssp HHHTTSCHHHHHHHHHTSTTCCHHHHHHHHHHTTCCSCCCCTTCHHHHHHHHHHHSSSCSC--HHHHHHHHHGGGTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC--CHHHHHHHHHCCCCH
T ss_conf 0101268889999988068848789999999968999789863799999999982888899--899999998727889