HHsearch results for GI: 254780479 and protein with PDBid: 3fhf_A
>3fhf_A Mjogg, N-glycosylase/DNA lyase, DNA-; helix-hairpin-helix, 8-oxoguanine, 8-OXOG, DNA damage, DNA repair, glycosidase, hydrolase; 2.00A {Methanocaldococcus jannaschii} PDB: 3knt_A*
Probab=99.94 E-value=2.6e-28 Score=218.42 Aligned_cols=169 Identities=17% Similarity=0.159 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHH
Q ss_conf 99999999996289988754855444567870467664467311612033265899877489978987299899999974
Q gi|254780479|r 8 IQSKILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVEPYFKKFMQKWPTIFCLSSAKDEEILSAWA 87 (356)
Q Consensus 8 ~~~~ll~w~~~~~R~lpwr~~~~~~~~~~~~py~v~vseimlqqT~v~~v~~~~~~~~~~~P~~~~la~a~~~~vl~~w~ 87 (356)
+-++++.+|.. ++|+.. .|||.++|++||.|||++..|...++++ | +.++.++++|+...+.
T Consensus 25 ~i~~~~~~f~~----~~~~~~--------~~~F~~Lv~~ILsqqt~~~~~~~~~~~l----~--e~~~~~~~eel~~~ik 86 (214)
T 3fhf_A 25 IIDKRIQEFKS----FKNKSN--------EEWFKELCFCILTANFTAEGGIRIQKEI----G--DGFLTLPREELEEKLK 86 (214)
T ss_dssp HHHHHHHHHHG----GGGSCH--------HHHHHHHHHHHHHTTSCHHHHHHHHHHH----T--THHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHCC----CCCCCC--------CCHHHHHHHHHHCCCCCHHHHHHHHHHH----H--HHHHCCCHHHHHHHHH
T ss_conf 99999998515----677654--------8889999999973657399999999999----9--9998699999999999
Q ss_pred CCC--HH-HHHHHHHHHHHH-----HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHC
Q ss_conf 046--34-588999877675-----4300578687314568888877787766776643496313124314666576519
Q gi|254780479|r 88 GLG--YY-TRARNLKKCADI-----IVKKYEGNFPHKVEILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFD 159 (356)
Q Consensus 88 gLG--yy-~Rar~l~~~a~~-----i~~~~~g~~P~~~~~l~~LpGiG~yta~ai~s~a~~~~~~~vD~Nv~RVl~R~~~ 159 (356)
..| || +||++|+++|++ +.+.++|.+|.+.++|.+|||||+|||++|++++|+.+.++||+||.||+.|++.
T Consensus 87 ~~G~~f~~~KAk~I~~~a~~~~~~~l~~~~~~~~~~~~~~L~~l~GIG~ktA~~~L~~~~~~~~~ivD~hv~Ri~~rlg~ 166 (214)
T 3fhf_A 87 NLGHRFYRKRAEYIVLARRFKNIKDIVESFENEKVAREFLVRNIKGIGYKEASHFLRNVGYDDVAIIDRHILRELYENNY 166 (214)
T ss_dssp HTTCTTHHHHHHHHHHHGGGCCHHHHHHHSSSHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCSCCCCCHHHHHHHHHTTS
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf 94645679999999999999999888897399898739999748887699999999997699863132799999999388
Q ss_pred CCCC-CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 7545-7356899987410257852267899999999
Q gi|254780479|r 160 IIKP-APLYHKTIKNYARKITSTSRPGDFVQAMMDL 194 (356)
Q Consensus 160 ~~~~-~~~~~k~l~~~~~~~~~~~~~~~~nQAlMdl 194 (356)
+... ...+++....+.+.+.+..+..++++++||+
T Consensus 167 ~~~~~k~~t~k~y~~~e~~l~~~~~~~~~~~~~lDl 202 (214)
T 3fhf_A 167 IDEIPKTLSRRKYLEIENILRDIGEEVNLKLSELDL 202 (214)
T ss_dssp SSSCCSSCCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 777776421647999999999777637999899899