HHsearch results for GI: 254780479 and protein with PDBid: 3fhf_A

>3fhf_A Mjogg, N-glycosylase/DNA lyase, DNA-; helix-hairpin-helix, 8-oxoguanine, 8-OXOG, DNA damage, DNA repair, glycosidase, hydrolase; 2.00A {Methanocaldococcus jannaschii} PDB: 3knt_A*
Probab=99.94  E-value=2.6e-28  Score=218.42  Aligned_cols=169  Identities=17%  Similarity=0.159  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHH
Q ss_conf             99999999996289988754855444567870467664467311612033265899877489978987299899999974
Q gi|254780479|r    8 IQSKILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVEPYFKKFMQKWPTIFCLSSAKDEEILSAWA   87 (356)
Q Consensus         8 ~~~~ll~w~~~~~R~lpwr~~~~~~~~~~~~py~v~vseimlqqT~v~~v~~~~~~~~~~~P~~~~la~a~~~~vl~~w~   87 (356)
                      +-++++.+|..    ++|+..        .|||.++|++||.|||++..|...++++    |  +.++.++++|+...+.
T Consensus        25 ~i~~~~~~f~~----~~~~~~--------~~~F~~Lv~~ILsqqt~~~~~~~~~~~l----~--e~~~~~~~eel~~~ik   86 (214)
T 3fhf_A           25 IIDKRIQEFKS----FKNKSN--------EEWFKELCFCILTANFTAEGGIRIQKEI----G--DGFLTLPREELEEKLK   86 (214)
T ss_dssp             HHHHHHHHHHG----GGGSCH--------HHHHHHHHHHHHHTTSCHHHHHHHHHHH----T--THHHHSCHHHHHHHHH
T ss_pred             HHHHHHHHHCC----CCCCCC--------CCHHHHHHHHHHCCCCCHHHHHHHHHHH----H--HHHHCCCHHHHHHHHH
T ss_conf             99999998515----677654--------8889999999973657399999999999----9--9998699999999999


Q ss_pred             CCC--HH-HHHHHHHHHHHH-----HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHC
Q ss_conf             046--34-588999877675-----4300578687314568888877787766776643496313124314666576519
Q gi|254780479|r   88 GLG--YY-TRARNLKKCADI-----IVKKYEGNFPHKVEILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFD  159 (356)
Q Consensus        88 gLG--yy-~Rar~l~~~a~~-----i~~~~~g~~P~~~~~l~~LpGiG~yta~ai~s~a~~~~~~~vD~Nv~RVl~R~~~  159 (356)
                      ..|  || +||++|+++|++     +.+.++|.+|.+.++|.+|||||+|||++|++++|+.+.++||+||.||+.|++.
T Consensus        87 ~~G~~f~~~KAk~I~~~a~~~~~~~l~~~~~~~~~~~~~~L~~l~GIG~ktA~~~L~~~~~~~~~ivD~hv~Ri~~rlg~  166 (214)
T 3fhf_A           87 NLGHRFYRKRAEYIVLARRFKNIKDIVESFENEKVAREFLVRNIKGIGYKEASHFLRNVGYDDVAIIDRHILRELYENNY  166 (214)
T ss_dssp             HTTCTTHHHHHHHHHHHGGGCCHHHHHHHSSSHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCSCCCCCHHHHHHHHHTTS
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf             94645679999999999999999888897399898739999748887699999999997699863132799999999388


Q ss_pred             CCCC-CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             7545-7356899987410257852267899999999
Q gi|254780479|r  160 IIKP-APLYHKTIKNYARKITSTSRPGDFVQAMMDL  194 (356)
Q Consensus       160 ~~~~-~~~~~k~l~~~~~~~~~~~~~~~~nQAlMdl  194 (356)
                      +... ...+++....+.+.+.+..+..++++++||+
T Consensus       167 ~~~~~k~~t~k~y~~~e~~l~~~~~~~~~~~~~lDl  202 (214)
T 3fhf_A          167 IDEIPKTLSRRKYLEIENILRDIGEEVNLKLSELDL  202 (214)
T ss_dssp             SSSCCSSCCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             777776421647999999999777637999899899