RPSBLAST alignment of GI: 254780479 and protein with PDBid: 1pu6

>1pu6_A 3-methyladenine DNA glycosylase; helix-hairpin-helix, base excision repair, hydrolase; HET: KCX; 1.64A {Helicobacter pylori} SCOP: a.96.1.5 PDB: 1pu7_A* 1pu8_A* Length = 218

 Score =  140 bits (354), Expect = 4e-34
 Identities = 28/216 (12%), Positives = 59/216 (27%), Gaps = 25/216 (11%)

Query: 8   IQSKILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVE-------PY 60
           I   +       +    W  +           ++  +  ++ Q T  + V          
Sbjct: 7   ILKALKSLDLLKNAPAWWWPNA--------LKFEALLGAVLTQNTKFEAVLKSLENLKNA 58

Query: 61  FKKFMQKWPTIFCLSSAKDEEILSAWAGLGYYTRA-RNLKKCADIIVKKYE----GNFPH 115
           F         +  ++  +  ++       G+Y +  + L   +  I+K ++         
Sbjct: 59  FILENDDEINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDLSGNILKDFQSFENFKQEV 118

Query: 116 KVEILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIKP-----APLYHKT 170
             E L    GIG  +A AI+  A     +VVD      + +    I+             
Sbjct: 119 TREWLLDQKGIGKESADAILCYACAKEVMVVDKYSYLFLKKLGIEIEDYDELQHFFEKGV 178

Query: 171 IKNYARKITSTSRPGDFVQAMMDLGALICTSNKPLC 206
            +N    +          Q        I   +K   
Sbjct: 179 QENLNSALALYENTISLAQLYARFHGKIVEFSKQKL 214