RPSBLAST alignment of GI: 254780479 and protein with PDBid: 3n5n

>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens} Length = 287
 Score =  253 bits (646), Expect = 5e-68
 Identities = 95/266 (35%), Positives = 135/266 (50%), Gaps = 5/266 (1%)

Query: 8   IQSKILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVEPYFKKFMQK 67
            +  +L WYD   R LPWR   + E       Y VW+SE+MLQQT V TV  Y+  +MQK
Sbjct: 18  FRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQK 77

Query: 68  WPTIFCLSSAKDEEILSAWAGLGYYTRARNLKKCADIIVKKYEGNFPHK-VEILKKLPGI 126
           WPT+  L+SA  EE+   WAGLGYY+R R L++ A  +V++  G+ P     + + LPG+
Sbjct: 78  WPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGV 137

Query: 127 GDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIKP--APLYHKTIKNYARKITSTSRP 184
           G YTA AI +IAF     VVD N+ R++ R   I     + L  + +   A+++   +RP
Sbjct: 138 GRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARP 197

Query: 185 GDFVQAMMDLGALICTSNKPLCPLCPIQKNCLTFSEGKSHLLGINTIKKKRPMRTGAVFI 244
           GDF QA M+LGA +CT  +PLC  CP++  C      +   L  +      P        
Sbjct: 198 GDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDVEECAP- 256

Query: 245 AITNDNRILLRKRTNTRLLEGMDELP 270
             T    + L          G+   P
Sbjct: 257 -NTGQCHLCLPPSEPWDQTLGVVNFP 281