HHSEARCH alignment of GI: 254780480 and SCOP domain: d1pkha_

Alignment
>d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.91  E-value=6e-25  Score=179.71  Aligned_cols=164  Identities=16%  Similarity=0.138  Sum_probs=120.1

Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECC-----CC--------CEEECCCCCCCC
Q ss_conf             76899999998752786036655443373167888145545666630455126-----77--------513015655558
Q gi|254780480|r  166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKR-----HT--------AAIDVDSENKYD  232 (367)
Q Consensus       166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkk-----ht--------~~IDl~k~~~y~  232 (367)
                      ++|||.+++++.++..++.++.++  ++-.+.|+||+..    +...-|.+..     ..        ....++..+.+.
T Consensus         1 MiLsd~~I~~~~~~g~i~i~Pf~~--~qiqp~s~DLrLg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (182)
T d1pkha_           1 MILSDKDIIDYVTSKRIIIKPFNK--DFVGPCSYDVTLG----DEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNL   74 (182)
T ss_dssp             CBCCHHHHHHHHHTTSSEEESCCG--GGBCSSCEEEEBC----SEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCC
T ss_pred             CCCCHHHHHHHHHCCCEEECCCCH--HHCCCCCCCEEEC----CEEEEEECCCCCCCCCCCHHHCCCCCCEEECCCCCCC
T ss_conf             916889999999749946848987--8838661243742----3899994423674456653111355430424543444


Q ss_pred             HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEE--CCCCCCEEEECCEEECCCCCCCCCCCCCCEE
Q ss_conf             77866431135577753998899789998633444283401644530--4333421342160456886654345667504
Q gi|254780480|r  233 ESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPY--DHSIGEFRVHYAGFFDPGFGCVLPQEVGAKA  310 (367)
Q Consensus       233 ~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~--~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~  310 (367)
                      ....+..+..    ++.++|.|++|||+.|.|+|++|+|++|.+.+.  .+|.|.+.+++|||+||||.|.+        
T Consensus        75 ~~~~~~~~~~----~~~~~l~p~~~~L~~t~E~v~lp~~~~~~~~~kSS~aR~G~~~~~ta~~iDpGy~G~l--------  142 (182)
T d1pkha_          75 TEEKINYFKE----KYNVDYVVEGGVLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAGWIDAGFKGKI--------  142 (182)
T ss_dssp             CHHHHHHHHH----HHCCSEEEESCEEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCCEECTTCEEEE--------
T ss_pred             CCCCEEEEEC----CCCEEECCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEECCCCCCEE--------
T ss_conf             5443168734----7860771798799999769995472158997344024431002123328899987669--------


Q ss_pred             EEEECC-CCCEEEECCCEEEEEEEEECCCCCCCCCCCC
Q ss_conf             788617-8888994798889999976376642223754
Q gi|254780480|r  311 VLEVRS-SVPFVLEHGQIIGRLKYESMDGEPERLYGEA  347 (367)
Q Consensus       311 vLevr~-~~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~  347 (367)
                      +||+.+ ..|+.|++||+||||+|++|+++++.+|+..
T Consensus       143 tlei~n~~~pi~I~~g~ri~Ql~F~~~~~~~~~~Y~~r  180 (182)
T d1pkha_         143 TLEIVAFDKPVILYKNQRIGQLIFSKLLSPADVGYSER  180 (182)
T ss_dssp             EEEEEESSSCEEEETTCEEEEEEEEECSSCCCCSEEEE
T ss_pred             EEEEEECCCCEEECCCCEEEEEEEEECCCCCCCCCCCC
T ss_conf             99999789898980899899999998777665786767


SCOP domain information

class: All beta proteins
fold: beta-clip
superfamily: dUTPase-like
family: dUTPase-like
domain: Bifunctional dCTP deaminase/dUTPase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]