Query gi|254780480|ref|YP_003064893.1| 2'-deoxycytidine 5'-triphosphate deaminase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 367 No_of_seqs 242 out of 475 Neff 5.3 Searched_HMMs 13730 Date Wed Jun 1 06:58:17 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780480.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1xs1a_ b.85.4.1 (A:) Deoxycyt 100.0 9.7E-41 7E-45 282.8 13.9 156 4-166 1-165 (193) 2 d1pkha_ b.85.4.1 (A:) Bifuncti 100.0 1.5E-39 1.1E-43 275.1 16.4 156 4-166 1-171 (182) 3 d1xs1a_ b.85.4.1 (A:) Deoxycyt 100.0 4.9E-34 3.6E-38 239.0 13.7 184 166-365 1-193 (193) 4 d1pkha_ b.85.4.1 (A:) Bifuncti 99.9 6E-25 4.4E-29 179.7 9.8 164 166-347 1-180 (182) 5 d1duna_ b.85.4.1 (A:) Deoxyuri 99.6 4E-15 2.9E-19 115.6 8.1 84 74-165 24-108 (120) 6 d1f7da_ b.85.4.1 (A:) Deoxyuri 99.5 1.3E-13 9.2E-18 105.8 8.7 83 74-164 23-106 (118) 7 d2bsya2 b.85.4.1 (A:121-256) M 99.3 2.2E-12 1.6E-16 97.6 7.3 82 74-166 19-101 (136) 8 d2bsya1 b.85.4.1 (A:4-116) Mon 99.3 2.6E-11 1.9E-15 90.7 11.3 81 74-165 28-109 (113) 9 d1duna_ b.85.4.1 (A:) Deoxyuri 99.2 6.5E-11 4.7E-15 88.1 10.7 90 249-346 26-117 (120) 10 d3ehwa1 b.85.4.1 (A:24-159) De 99.2 4.5E-11 3.3E-15 89.1 9.2 83 74-164 30-114 (136) 11 d1vyqa1 b.85.4.1 (A:1-159) Deo 99.1 2.7E-10 2E-14 84.0 9.2 120 32-165 25-145 (159) 12 d1euwa_ b.85.4.1 (A:) Deoxyuri 99.1 4.4E-10 3.2E-14 82.6 9.3 85 74-164 38-125 (136) 13 d1sixa_ b.85.4.1 (A:) Deoxyuri 99.0 6.4E-10 4.7E-14 81.6 7.9 85 74-164 41-128 (153) 14 d1f7da_ b.85.4.1 (A:) Deoxyuri 98.9 2.9E-09 2.1E-13 77.3 9.7 83 249-337 25-107 (118) 15 d2bsya1 b.85.4.1 (A:4-116) Mon 98.8 4.1E-08 3E-12 69.8 12.0 84 247-339 28-111 (113) 16 d3ehwa1 b.85.4.1 (A:24-159) De 98.6 1.4E-07 1.1E-11 66.2 9.7 85 249-339 32-117 (136) 17 d1sixa_ b.85.4.1 (A:) Deoxyuri 98.5 8.3E-07 6E-11 61.3 10.0 86 249-340 43-132 (153) 18 d2bsya2 b.85.4.1 (A:121-256) M 98.4 1.2E-06 8.4E-11 60.3 9.5 98 249-358 21-120 (136) 19 d1euwa_ b.85.4.1 (A:) Deoxyuri 98.4 2.4E-06 1.8E-10 58.2 11.1 86 247-338 38-127 (136) 20 d1vyqa1 b.85.4.1 (A:1-159) Deo 97.9 2.2E-05 1.6E-09 52.0 8.2 77 256-338 68-146 (159) 21 d2caya1 b.55.1.12 (A:1-99,A:25 50.7 2.5 0.00018 19.0 1.1 31 235-268 2-32 (130) 22 d1r57a_ d.108.1.1 (A:) Hypothe 48.1 6.9 0.0005 16.1 3.0 35 323-357 18-52 (102) 23 d2a1xa1 b.82.2.9 (A:43-338) Ph 45.1 4.8 0.00035 17.2 1.8 32 1-32 6-37 (296) 24 d1go3e2 d.230.1.1 (E:1-78) N-t 31.3 10 0.00073 15.0 1.7 69 257-333 2-72 (78) No 1 >d1xs1a_ b.85.4.1 (A:) Deoxycytidine triphosphate deaminase (dCTP deaminase) {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=9.7e-41 Score=282.81 Aligned_cols=156 Identities=22% Similarity=0.343 Sum_probs=132.8 Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCH-HHCCCCEEEEEECCEEEEEECCCCCCCC-----CCHHHHCCCC--EEEEEECCC Q ss_conf 6158689999998798498178986-5657122588758989998123157888-----6211000240--478873688 Q gi|254780480|r 4 GVLPDKAIATLAERGDIVSEHPLEK-NQIQPASIDLRLSSKAYRVRASFLPNID-----GLVSDKIKHF--KLREIDLSG 75 (367) Q Consensus 4 GILsd~~I~~li~~g~I~i~~p~~~-~QIQPaSiDLRLG~~~~rv~asflp~~~-----~~v~~~l~~~--~~~eidl~~ 75 (367) |||||++|++++++|.|.++ |+++ +||||||+|||||+++++++.+.-+..+ ..+.+.++.. ....++.++ T Consensus 1 MiLSd~~I~~~i~~g~I~i~-P~~~~~qiqp~s~DLrLg~~~~v~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (193) T d1xs1a_ 1 MRLCDRDIEAWLDEGRLSIN-PRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGE 79 (193) T ss_dssp CBCCHHHHHHHHHHTSSEEE-SCCCGGGEETTEEEEEBCSEEBCBCGGGCSCEETTSCHHHHHHHHHHHBCCCEECCTTC T ss_pred CCCCHHHHHHHHHCCCEEEC-CCCHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCC T ss_conf 95788999999986995871-68721015784599873667999954465203567775023333221034215505786 Q ss_pred CEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCC Q ss_conf 6486687329999888998499827998601343112503423207877554236674438999951686-527983398 Q gi|254780480|r 76 GTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGS 154 (367) Q Consensus 76 g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~ 154 (367) +|+|+||++||++|+|+|+||+|++|.++||||+||+||++|++++ +|||||+|++||||.|.+ +||++++|| T Consensus 80 ~~~L~Pg~~~L~~T~E~v~lP~~~~a~~~~rSS~~R~Gl~~~~~ag------~~dpG~~G~ltlel~n~~~~pi~i~~g~ 153 (193) T d1xs1a_ 80 AFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAH------RIDPGWSGCIVLEFYNSGKLPLALRPGM 153 (193) T ss_dssp CEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHHTTTEESCSSCC------EECTTCEEEEEEEEEECSSSCEEECTTS T ss_pred EEEEECCCEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCC------EECCCCCEEEEEEEEECCCCEEEECCCC T ss_conf 1998189899999777886483548999814660005778851354------8779976069999996774269975899 Q ss_pred EEEEEEEEECCC Q ss_conf 035689850887 Q gi|254780480|r 155 RLSQIRFVKERK 166 (367) Q Consensus 155 rl~Qi~f~~g~~ 166 (367) |||||+|++... T Consensus 154 ~i~Qlvf~~~~~ 165 (193) T d1xs1a_ 154 LIGALSFEPLSG 165 (193) T ss_dssp EEEEEEEEECSS T ss_pred EEEEEEEEECCC T ss_conf 899999998878 No 2 >d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=100.00 E-value=1.5e-39 Score=275.07 Aligned_cols=156 Identities=22% Similarity=0.233 Sum_probs=135.7 Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEE-------------- Q ss_conf 615868999999879849817898656571225887589899981231578886211000240478-------------- Q gi|254780480|r 4 GVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLR-------------- 69 (367) Q Consensus 4 GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~-------------- 69 (367) |||||++|++++++|.|.++ ||+++||||||+|||||+.++++..+.++..+....+++...... T Consensus 1 MiLsd~~I~~~~~~g~i~i~-Pf~~~qiqp~s~DLrLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (182) T d1pkha_ 1 MILSDKDIIDYVTSKRIIIK-PFNKDFVGPCSYDVTLGDEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNLTEEKI 79 (182) T ss_dssp CBCCHHHHHHHHHTTSSEEE-SCCGGGBCSSCEEEEBCSEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCCCHHHH T ss_pred CCCCHHHHHHHHHCCCEEEC-CCCHHHCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCE T ss_conf 91688999999974994684-89878838661243742389999442367445665311135543042454344454431 Q ss_pred -EEECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCE Q ss_conf -8736886486687329999888998499827998601343112503423207877554236674438999951686527 Q gi|254780480|r 70 -EIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPI 148 (367) Q Consensus 70 -eidl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI 148 (367) .+..+++++|.|+.+||++|+|+|++|+|++|.++||||++|+|++++.+++ +|||||+|++||||+|.++|| T Consensus 80 ~~~~~~~~~~l~p~~~~L~~t~E~v~lp~~~~~~~~~kSS~aR~G~~~~~ta~------~iDpGy~G~ltlei~n~~~pi 153 (182) T d1pkha_ 80 NYFKEKYNVDYVVEGGVLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAG------WIDAGFKGKITLEIVAFDKPV 153 (182) T ss_dssp HHHHHHHCCSEEEESCEEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCC------EECTTCEEEEEEEEEESSSCE T ss_pred EEEECCCCEEECCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCE------EECCCCCCEEEEEEEECCCCE T ss_conf 68734786077179879999976999547215899734402443100212332------889998766999999789898 Q ss_pred EEECCCEEEEEEEEECCC Q ss_conf 983398035689850887 Q gi|254780480|r 149 VVRVGSRLSQIRFVKERK 166 (367) Q Consensus 149 ~v~~G~rl~Qi~f~~g~~ 166 (367) +||+|||||||+|++.+. T Consensus 154 ~I~~g~ri~Ql~F~~~~~ 171 (182) T d1pkha_ 154 ILYKNQRIGQLIFSKLLS 171 (182) T ss_dssp EEETTCEEEEEEEEECSS T ss_pred EECCCCEEEEEEEEECCC T ss_conf 980899899999998777 No 3 >d1xs1a_ b.85.4.1 (A:) Deoxycytidine triphosphate deaminase (dCTP deaminase) {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=4.9e-34 Score=239.04 Aligned_cols=184 Identities=21% Similarity=0.300 Sum_probs=146.2 Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHH----HHHHC Q ss_conf 76899999998752786036655443373167888145545666630455126775130156555587786----64311 Q gi|254780480|r 166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDF----WDPLF 241 (367) Q Consensus 166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~df----we~i~ 241 (367) ++|||.+++++.++..++.++.++. .+..+.|+||+.. +.+.-|++. +++.||++.+..-..+.+ |++.. T Consensus 1 MiLSd~~I~~~i~~g~I~i~P~~~~-~qiqp~s~DLrLg----~~~~v~~~~-~~~~id~~~~~~~~~~~~~~~~~~~~~ 74 (193) T d1xs1a_ 1 MRLCDRDIEAWLDEGRLSINPRPPV-ERINGATVDVRLG----NKFRTFRGH-TAAFIDLSGPKDEVSAALDRVMSDEIV 74 (193) T ss_dssp CBCCHHHHHHHHHHTSSEEESCCCG-GGEETTEEEEEBC----SEEBCBCGG-GCSCEETTSCHHHHHHHHHHHBCCCEE T ss_pred CCCCHHHHHHHHHCCCEEECCCCHH-HCCCCCEEEEECC----CEEEEEECC-CCCCCCCCCCCCHHHHHHHHCCCCEEE T ss_conf 9578899999998699587168721-0157845998736----679999544-652035677750233332210342155 Q ss_pred CCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCC--CCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC--C Q ss_conf 35577753998899789998633444283401644530433--3421342160456886654345667504788617--8 Q gi|254780480|r 242 SWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHS--IGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS--S 317 (367) Q Consensus 242 ~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~--~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~--~ 317 (367) . ..++.++|+||+|||+.|.|+|++|+|++|.+.+.++. .|.+.+.+|||+||||.|.. +||+.| . T Consensus 75 ~--~~~~~~~L~Pg~~~L~~T~E~v~lP~~~~a~~~~rSS~~R~Gl~~~~~ag~~dpG~~G~l--------tlel~n~~~ 144 (193) T d1xs1a_ 75 L--DEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCI--------VLEFYNSGK 144 (193) T ss_dssp C--CTTCCEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHHTTTEESCSSCCEECTTCEEEE--------EEEEEECSS T ss_pred E--CCCCEEEEECCCEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCEECCCCCEEE--------EEEEEECCC T ss_conf 0--578619981898999997778864835489998146600057788513548779976069--------999996774 Q ss_pred CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHHHHH Q ss_conf 88899479888999997637664222375434723266-6773443430 Q gi|254780480|r 318 VPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ-ALKLSKHFHQ 365 (367) Q Consensus 318 ~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Q-gl~lsk~f~~ 365 (367) .|+.|++||+||||+|++|+++++++|+...+||||+| |+++||+|+. T Consensus 145 ~pi~i~~g~~i~Qlvf~~~~~~~~~~Y~~~~~gkYq~q~g~~~sk~~~d 193 (193) T d1xs1a_ 145 LPLALRPGMLIGALSFEPLSGPAVRPYNRREDAKYRNQQGAVASRIDKD 193 (193) T ss_dssp SCEEECTTSEEEEEEEEECSSCCSSCGGGCTTCSCSSBCSCCCCCGGGC T ss_pred CEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 2699758998999999988787543457777985789889876363579 No 4 >d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=99.91 E-value=6e-25 Score=179.71 Aligned_cols=164 Identities=16% Similarity=0.138 Sum_probs=120.1 Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECC-----CC--------CEEECCCCCCCC Q ss_conf 76899999998752786036655443373167888145545666630455126-----77--------513015655558 Q gi|254780480|r 166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKR-----HT--------AAIDVDSENKYD 232 (367) Q Consensus 166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkk-----ht--------~~IDl~k~~~y~ 232 (367) ++|||.+++++.++..++.++.++ ++-.+.|+||+.. +...-|.+.. .. ....++..+.+. T Consensus 1 MiLsd~~I~~~~~~g~i~i~Pf~~--~qiqp~s~DLrLg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (182) T d1pkha_ 1 MILSDKDIIDYVTSKRIIIKPFNK--DFVGPCSYDVTLG----DEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNL 74 (182) T ss_dssp CBCCHHHHHHHHHTTSSEEESCCG--GGBCSSCEEEEBC----SEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCC T ss_pred CCCCHHHHHHHHHCCCEEECCCCH--HHCCCCCCCEEEC----CEEEEEECCCCCCCCCCCHHHCCCCCCEEECCCCCCC T ss_conf 916889999999749946848987--8838661243742----3899994423674456653111355430424543444 Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEE--CCCCCCEEEECCEEECCCCCCCCCCCCCCEE Q ss_conf 77866431135577753998899789998633444283401644530--4333421342160456886654345667504 Q gi|254780480|r 233 ESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPY--DHSIGEFRVHYAGFFDPGFGCVLPQEVGAKA 310 (367) Q Consensus 233 ~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~--~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~ 310 (367) ....+..+.. ++.++|.|++|||+.|.|+|++|+|++|.+.+. .+|.|.+.+++|||+||||.|.+ T Consensus 75 ~~~~~~~~~~----~~~~~l~p~~~~L~~t~E~v~lp~~~~~~~~~kSS~aR~G~~~~~ta~~iDpGy~G~l-------- 142 (182) T d1pkha_ 75 TEEKINYFKE----KYNVDYVVEGGVLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAGWIDAGFKGKI-------- 142 (182) T ss_dssp CHHHHHHHHH----HHCCSEEEESCEEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCCEECTTCEEEE-------- T ss_pred CCCCEEEEEC----CCCEEECCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEECCCCCCEE-------- T ss_conf 5443168734----7860771798799999769995472158997344024431002123328899987669-------- Q ss_pred EEEECC-CCCEEEECCCEEEEEEEEECCCCCCCCCCCC Q ss_conf 788617-8888994798889999976376642223754 Q gi|254780480|r 311 VLEVRS-SVPFVLEHGQIIGRLKYESMDGEPERLYGEA 347 (367) Q Consensus 311 vLevr~-~~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~ 347 (367) +||+.+ ..|+.|++||+||||+|++|+++++.+|+.. T Consensus 143 tlei~n~~~pi~I~~g~ri~Ql~F~~~~~~~~~~Y~~r 180 (182) T d1pkha_ 143 TLEIVAFDKPVILYKNQRIGQLIFSKLLSPADVGYSER 180 (182) T ss_dssp EEEEEESSSCEEEETTCEEEEEEEEECSSCCCCSEEEE T ss_pred EEEEEECCCCEEECCCCEEEEEEEEECCCCCCCCCCCC T ss_conf 99999789898980899899999998777665786767 No 5 >d1duna_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Equine infectious anemia virus [TaxId: 11665]} Probab=99.57 E-value=4e-15 Score=115.62 Aligned_cols=84 Identities=13% Similarity=0.189 Sum_probs=75.9 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+..+++|++..+++|.+.+++|++.+|++.||||++|-|+.++. ..||+||+|+|++++.|.+ -|+.+++ T Consensus 24 ~ed~~i~p~~~~~i~tg~~i~iP~g~~g~i~~RSsla~~gl~v~~--------GvID~gY~Gei~v~l~N~~~~~~~i~~ 95 (120) T d1duna_ 24 PYDIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGLLING--------GIIDEGYTGEIQVICTNIGKSNIKLIE 95 (120) T ss_dssp SSCEEECTTCEEEEECCCEEECCTTEEEEEECCHHHHHTTEEEEC--------CEEETTCCSCCEEEEEECSSSCEEECT T ss_pred CCCEEECCCCEEEEEECEEEECCCCCEEEEEECCCEEECCCCCCC--------CEEECCCCCCEEEEEEECCCCCEEECC T ss_conf 988899999999999150998589848999613652322885545--------586036668679999978998689879 Q ss_pred CCEEEEEEEEECC Q ss_conf 9803568985088 Q gi|254780480|r 153 GSRLSQIRFVKER 165 (367) Q Consensus 153 G~rl~Qi~f~~g~ 165 (367) |+||+||.|.+-. T Consensus 96 G~rIaQlv~~~~~ 108 (120) T d1duna_ 96 GQKFAQLIILQHH 108 (120) T ss_dssp TCEEEEEEEEECC T ss_pred CCEEEEEEEEECC T ss_conf 9989999999877 No 6 >d1f7da_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Feline immunodeficiency virus [TaxId: 11673]} Probab=99.46 E-value=1.3e-13 Score=105.81 Aligned_cols=83 Identities=19% Similarity=0.167 Sum_probs=75.7 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+.++++|++.++++|.+++.+|++..|.+.||||++|.|+.+.. ..||+||.|+|++.+.|.+ .|+.+.+ T Consensus 23 ~~~~~I~P~~~~~i~tg~~v~ip~g~~~~i~~RSsl~~~gl~v~~--------GvID~gYrGei~v~l~N~~~~~~~i~~ 94 (118) T d1f7da_ 23 AKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLG--------GVIDEGYRGEIGVIMINVSRKSITLME 94 (118) T ss_dssp SSCEEECTTCEEEEECCCEECCCTTEEEEEECCHHHHTTTEEEEC--------CEECTTCCSCCEEEEEECSSSCEEECT T ss_pred CCCEEECCCCEEEEECCEEEECCCCCEEEEEECCCCEEEEEEECC--------CCCCCCCCCCCEEEEEECCCCCEEECC T ss_conf 977899999999998786998289966889732220202684110--------121833378728999978998879889 Q ss_pred CCEEEEEEEEEC Q ss_conf 980356898508 Q gi|254780480|r 153 GSRLSQIRFVKE 164 (367) Q Consensus 153 G~rl~Qi~f~~g 164 (367) |+||+|+.|..- T Consensus 95 G~rIaQlv~~p~ 106 (118) T d1f7da_ 95 RQKIAQLIILPC 106 (118) T ss_dssp TCEEEEEEEEEC T ss_pred CCEEEEEEEEEE T ss_conf 998999999870 No 7 >d2bsya2 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Probab=99.31 E-value=2.2e-12 Score=97.64 Aligned_cols=82 Identities=9% Similarity=0.027 Sum_probs=73.5 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+..+++|++.++++|.+.+.+|++.+|.+.||||++|.|+.+. ..+||.|+|.+++.|.| -|+.+.+ T Consensus 19 ~e~~~I~P~~~~~v~tgi~~~ip~g~~~~i~~RSsla~kGl~v~-----------~~~~~~Gei~v~l~N~s~~~~~I~~ 87 (136) T d2bsya2 19 PKDLALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGLAMQGILVK-----------PCRWRRGGVDVSLTNFSDQTVFLNK 87 (136) T ss_dssp SSCEEECTTCEEEEEECSCCCCCTTEEEEEECCHHHHHTTEEEC-----------CEECBTTBEEEEEEECSSSCEEECT T ss_pred CCCEEECCCCEEEECCEEEEEECCCEEEEEEECCCCCCCCEEEE-----------CCCEECCEEEEEEEECCCCCEEECC T ss_conf 98879999998960456899807980899980021030897991-----------9976566799999989897789869 Q ss_pred CCEEEEEEEEECCC Q ss_conf 98035689850887 Q gi|254780480|r 153 GSRLSQIRFVKERK 166 (367) Q Consensus 153 G~rl~Qi~f~~g~~ 166 (367) |+|||||.|.+... T Consensus 88 G~RIaQlVf~~~~~ 101 (136) T d2bsya2 88 YRRFCQLVYLHKHH 101 (136) T ss_dssp TCEEEEEEEEEGGG T ss_pred CCEEEEEEEEECCC T ss_conf 99899999984443 No 8 >d2bsya1 b.85.4.1 (A:4-116) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Probab=99.28 E-value=2.6e-11 Score=90.71 Aligned_cols=81 Identities=17% Similarity=0.117 Sum_probs=72.1 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+..+++|++..+++|-.++.+|++..+.+.+|||.| |.++. ..||+||+|+|++++.|.+ .++.+++ T Consensus 28 ~~~i~i~P~e~~~v~tGl~i~iP~g~~~~l~~RSs~g---l~~~~--------GvID~gY~Gei~v~l~N~~~~~~~i~~ 96 (113) T d2bsya1 28 KTTILLRPMKTTTVDLGLYARPPEGHGLMLWGSTSRP---VTSHV--------GIIDPGYTGELRLILQNQRRYNSTLRP 96 (113) T ss_dssp SSCEEECTTSEEEEEEEEEEECCTTEEEEEEEECSSS---EEECC--------EEECTTCCSCEEEEEEESSSSCEEECT T ss_pred CCCEEECCCCEEEECCCEEEECCCCCEEEEEHHCCCE---EEECC--------EEECCCCEEEEEEEEEECCCCCEEECC T ss_conf 9998989998899606729984999766531114740---66012--------166888800499999968996099868 Q ss_pred CCEEEEEEEEECC Q ss_conf 9803568985088 Q gi|254780480|r 153 GSRLSQIRFVKER 165 (367) Q Consensus 153 G~rl~Qi~f~~g~ 165 (367) |+|+.|+.++... T Consensus 97 G~~~~qlv~~~~~ 109 (113) T d2bsya1 97 SELKIHLAAFRYA 109 (113) T ss_dssp TSCEEEEEEEEEE T ss_pred CCEEEEEEEEECC T ss_conf 9999999999723 No 9 >d1duna_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Equine infectious anemia virus [TaxId: 11665]} Probab=99.21 E-value=6.5e-11 Score=88.11 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=73.9 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEE--EECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCC Q ss_conf 39988997899986334442834016445--3043334213421604568866543456675047886178888994798 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMI--PYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQ 326 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~--~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~ 326 (367) .++|+|+++.+..|.+.+.+|+++++... ++.++-|. .+ .+|.+||||.|.+.. .|-+.++.|+.++.|+ T Consensus 26 d~~i~p~~~~~i~tg~~i~iP~g~~g~i~~RSsla~~gl-~v-~~GvID~gY~Gei~v------~l~N~~~~~~~i~~G~ 97 (120) T d1duna_ 26 DIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGL-LI-NGGIIDEGYTGEIQV------ICTNIGKSNIKLIEGQ 97 (120) T ss_dssp CEEECTTCEEEEECCCEEECCTTEEEEEECCHHHHHTTE-EE-ECCEEETTCCSCCEE------EEEECSSSCEEECTTC T ss_pred CEEECCCCEEEEEECEEEECCCCCEEEEEECCCEEECCC-CC-CCCEEECCCCCCEEE------EEEECCCCCEEECCCC T ss_conf 889999999999915099858984899961365232288-55-455860366686799------9997899868987999 Q ss_pred EEEEEEEEECCCCCCCCCCC Q ss_conf 88999997637664222375 Q gi|254780480|r 327 IIGRLKYESMDGEPERLYGE 346 (367) Q Consensus 327 ~i~~l~~~~~~~~p~~~Yg~ 346 (367) +||||+|.++..+..++|++ T Consensus 98 rIaQlv~~~~~~~~~~~~~e 117 (120) T d1duna_ 98 KFAQLIILQHHSNSRQPWDE 117 (120) T ss_dssp EEEEEEEEECCCCCCCCCCT T ss_pred EEEEEEEEECCCCCEEEECC T ss_conf 89999999877885688433 No 10 >d3ehwa1 b.85.4.1 (A:24-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Human (Homo sapiens) [TaxId: 9606]} Probab=99.20 E-value=4.5e-11 Score=89.13 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=72.5 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC-CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE Q ss_conf 88648668732999988899849982799860134311-2503423207877554236674438999951686-527983 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR-IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR 151 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR-Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~ 151 (367) .+..++.|++..+++|...+.+|++..|++.||||++. .+|.+. . ..||+||.|+|.+-+.|.+ -|+.+. T Consensus 30 ~ed~~i~p~~~~~i~tgi~~~ip~g~~~~i~~RSs~~~k~~l~~~--~------GvID~dYrGei~v~l~N~~~~~~~i~ 101 (136) T d3ehwa1 30 AYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVG--A------GVIDEDYRGNVGVVLFNFGKEKFEVK 101 (136) T ss_dssp SSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEE--C------CEECTTBCSCCEEEEEECSSSCEEEC T ss_pred CEEEEEECCCEEEEECCCEEEECCCCEEEEEEECCCCCCCEEEEC--C------EEECCCCCCEEEEEEEECCCCCEEEE T ss_conf 754999736328999784886048958878640355664459807--8------79748887329999996156332772 Q ss_pred CCCEEEEEEEEEC Q ss_conf 3980356898508 Q gi|254780480|r 152 VGSRLSQIRFVKE 164 (367) Q Consensus 152 ~G~rl~Qi~f~~g 164 (367) +|+||+||.|..- T Consensus 102 ~G~riaQlv~~~~ 114 (136) T d3ehwa1 102 KGDRIAQLICERI 114 (136) T ss_dssp TTCEEEEEEEEEB T ss_pred CCCEEEEEEECCC T ss_conf 4973899998167 No 11 >d1vyqa1 b.85.4.1 (A:1-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Plasmodium falciparum [TaxId: 5833]} Probab=99.09 E-value=2.7e-10 Score=84.03 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=85.7 Q ss_pred CCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC Q ss_conf 71225887589899981231578886211000240478873688648668732999988899849982799860134311 Q gi|254780480|r 32 QPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR 111 (367) Q Consensus 32 QPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR 111 (367) +-|++||..-+... + .|+....+. + ......+....+++..+.......+...+..|.++.+++.||||+++ T Consensus 25 gdAG~DL~~~~d~~-i----~p~~~~~i~--t-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pRSslaK 96 (159) T d1vyqa1 25 GDSGLDLFIVKDEV-L----KPKSTTFVK--L-GIKAIALQYKSNYYYKCEKSENKKKDDDKSNIVNTSFLLFPRSSISK 96 (159) T ss_dssp -CCEEEECCCSCEE-E----CTTEEEEEE--E-EEEEEEEECCCCC------------------CEECCEEEEECGGGGG T ss_pred CCEEEEEECCCCEE-E----CCCCEEEEE--C-CCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCC T ss_conf 90599797587879-8----999889982--7-88889976055604420123344444433467881699973488001 Q ss_pred CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCCEEEEEEEEECC Q ss_conf 2503423207877554236674438999951686-52798339803568985088 Q gi|254780480|r 112 IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFVKER 165 (367) Q Consensus 112 Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~rl~Qi~f~~g~ 165 (367) .++.....+ ..||+||.|+|.+.+.|.+ -|+.+..|+||+||.|..-. T Consensus 97 ~~l~l~n~~------GIIDsgYrGei~v~l~N~~~~~~~I~~GdRIaQlv~~~~~ 145 (159) T d1vyqa1 97 TPLRLANSI------GLIDAGYRGEIIAALDNTSDQEYHIKKNDKLVQLVSFTGE 145 (159) T ss_dssp TTEEETTSS------EEECTTCCSEEEEEEEECSSSCEEECTTCCCEEEECTTCC T ss_pred CCEEECCCC------CCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEEEECC T ss_conf 572564647------6679766636999999689975697799949999962148 No 12 >d1euwa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Escherichia coli [TaxId: 562]} Probab=99.06 E-value=4.4e-10 Score=82.65 Aligned_cols=85 Identities=20% Similarity=0.370 Sum_probs=71.6 Q ss_pred CCCEEECCCCEEEEEEEEEEECCC-CCEEEEECCCCCCC-CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEE Q ss_conf 886486687329999888998499-82799860134311-2503423207877554236674438999951686-52798 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKN-GISAYANPKSSIGR-IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVV 150 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~-di~a~~~pKSS~GR-Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v 150 (367) ++..++.|++..+++|.-.+.+|+ +..|.+.||||+++ .++.....+ ..||+||+|+|.+-+.|.+ -|+.+ T Consensus 38 ~~~i~i~p~~~~~i~tGi~~~~p~~~~~~~i~~RSs~~~K~~l~~~n~~------GvID~dYrGei~v~l~N~~~~~~~i 111 (136) T d1euwa_ 38 NDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLV------GLIDSDYQGQLMISVWNRGQDSFTI 111 (136) T ss_dssp SSCEEECTTCEEEEEEEEEEECCCTTEEEEEEECHHHHHHHCEEETTSS------EEECTTCCSEEEEEEEECSSSCEEE T ss_pred CCCEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCC------CCCCCCCCCCEEEEEEECCCCEEEE T ss_conf 7706229996398620389984389816799701573234017515644------5334677884599999799972698 Q ss_pred ECCCEEEEEEEEEC Q ss_conf 33980356898508 Q gi|254780480|r 151 RVGSRLSQIRFVKE 164 (367) Q Consensus 151 ~~G~rl~Qi~f~~g 164 (367) .+|+||+|+.|..- T Consensus 112 ~~GdRIaQlv~~~~ 125 (136) T d1euwa_ 112 QPGERIAQMIFVPV 125 (136) T ss_dssp CTTCEEEEEEEEEC T ss_pred CCCCEEEEEEEEEC T ss_conf 69998999998674 No 13 >d1sixa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Mycobacterium tuberculosis, rv2697c [TaxId: 1773]} Probab=99.00 E-value=6.4e-10 Score=81.61 Aligned_cols=85 Identities=18% Similarity=0.292 Sum_probs=72.7 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC-CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC--CCEEE Q ss_conf 88648668732999988899849982799860134311-2503423207877554236674438999951686--52798 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR-IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT--FPIVV 150 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR-Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s--fpI~v 150 (367) .+..++.|++..+++|...+.+|++..+.+.||||++. -+|.+...+ ..||+||+|+|.+-+.|.+ -|+.+ T Consensus 41 ~ed~~i~p~~~~~i~tgi~~~~p~g~~~~i~~RSs~~~k~gl~l~n~~------GiID~dYrGel~v~l~N~~~~~~~~i 114 (153) T d1sixa_ 41 AEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSP------GTIDAGYRGEIKVALINLDPAAPIVV 114 (153) T ss_dssp SSCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEETTSS------EEEETTCCSCCEEEEEECCSSCCEEE T ss_pred CCCEEECCCCEEEEEECCEEEECCCCEEEECCCCHHHHCCCCEEECCC------CEEECCCCCCEEEEEEECCCCCCEEE T ss_conf 641483776069999365732046855525065434220574970688------47754668830899996998857698 Q ss_pred ECCCEEEEEEEEEC Q ss_conf 33980356898508 Q gi|254780480|r 151 RVGSRLSQIRFVKE 164 (367) Q Consensus 151 ~~G~rl~Qi~f~~g 164 (367) .+|+||+||.|..- T Consensus 115 ~~G~RIaQlv~~~~ 128 (153) T d1sixa_ 115 HRGDRIAQLLVQRV 128 (153) T ss_dssp CTTCEEEEEEEEEC T ss_pred CCCCCEEEEEEEEC T ss_conf 58981999997104 No 14 >d1f7da_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Feline immunodeficiency virus [TaxId: 11673]} Probab=98.95 E-value=2.9e-09 Score=77.28 Aligned_cols=83 Identities=16% Similarity=0.119 Sum_probs=66.7 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEE Q ss_conf 39988997899986334442834016445304333421342160456886654345667504788617888899479888 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQII 328 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i 328 (367) .++|+|++.++..|.+++.+|+++.+...|.++.......-.+|.+||||.|.+.. .|.+.++.|+.++.|++| T Consensus 25 ~~~I~P~~~~~i~tg~~v~ip~g~~~~i~~RSsl~~~gl~v~~GvID~gYrGei~v------~l~N~~~~~~~i~~G~rI 98 (118) T d1f7da_ 25 EIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLGGVIDEGYRGEIGV------IMINVSRKSITLMERQKI 98 (118) T ss_dssp CEEECTTCEEEEECCCEECCCTTEEEEEECCHHHHTTTEEEECCEECTTCCSCCEE------EEEECSSSCEEECTTCEE T ss_pred CEEECCCCEEEEECCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEE------EEEECCCCCEEECCCCEE T ss_conf 78999999999987869982899668897322202026841101218333787289------999789988798899989 Q ss_pred EEEEEEECC Q ss_conf 999997637 Q gi|254780480|r 329 GRLKYESMD 337 (367) Q Consensus 329 ~~l~~~~~~ 337 (367) |||+|.+.. T Consensus 99 aQlv~~p~~ 107 (118) T d1f7da_ 99 AQLIILPCK 107 (118) T ss_dssp EEEEEEECC T ss_pred EEEEEEEEC T ss_conf 999998706 No 15 >d2bsya1 b.85.4.1 (A:4-116) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Probab=98.82 E-value=4.1e-08 Score=69.84 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=70.1 Q ss_pred CCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCC Q ss_conf 75399889978999863344428340164453043334213421604568866543456675047886178888994798 Q gi|254780480|r 247 EGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQ 326 (367) Q Consensus 247 ~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~ 326 (367) +..++|+|+|..+..|-.++.+|+++++...+.++. | ...-+|.+||||.|.+. ..|.+.++.|+.++.|| T Consensus 28 ~~~i~i~P~e~~~v~tGl~i~iP~g~~~~l~~RSs~-g--l~~~~GvID~gY~Gei~------v~l~N~~~~~~~i~~G~ 98 (113) T d2bsya1 28 KTTILLRPMKTTTVDLGLYARPPEGHGLMLWGSTSR-P--VTSHVGIIDPGYTGELR------LILQNQRRYNSTLRPSE 98 (113) T ss_dssp SSCEEECTTSEEEEEEEEEEECCTTEEEEEEEECSS-S--EEECCEEECTTCCSCEE------EEEEESSSSCEEECTTS T ss_pred CCCEEECCCCEEEECCCEEEECCCCCEEEEEHHCCC-E--EEECCEEECCCCEEEEE------EEEEECCCCCEEECCCC T ss_conf 999898999889960672998499976653111474-0--66012166888800499------99996899609986899 Q ss_pred EEEEEEEEECCCC Q ss_conf 8899999763766 Q gi|254780480|r 327 IIGRLKYESMDGE 339 (367) Q Consensus 327 ~i~~l~~~~~~~~ 339 (367) +++||++++..++ T Consensus 99 ~~~qlv~~~~~tP 111 (113) T d2bsya1 99 LKIHLAAFRYATP 111 (113) T ss_dssp CEEEEEEEEEECC T ss_pred EEEEEEEEECCCC T ss_conf 9999999972368 No 16 >d3ehwa1 b.85.4.1 (A:24-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Human (Homo sapiens) [TaxId: 9606]} Probab=98.62 E-value=1.4e-07 Score=66.23 Aligned_cols=85 Identities=19% Similarity=0.206 Sum_probs=68.2 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 3998899789998633444283401644530433342-134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) ..+|.|++..+..|..++.+|+++.+.+.|.++..-- +.....|.+|+||.|.+. ..|...++.|+.++.|++ T Consensus 32 d~~i~p~~~~~i~tgi~~~ip~g~~~~i~~RSs~~~k~~l~~~~GvID~dYrGei~------v~l~N~~~~~~~i~~G~r 105 (136) T d3ehwa1 32 DYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVG------VVLFNFGKEKFEVKKGDR 105 (136) T ss_dssp CEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEECCEECTTBCSCCE------EEEEECSSSCEEECTTCE T ss_pred EEEEECCCEEEEECCCEEEECCCCEEEEEEECCCCCCCEEEECCEEECCCCCCEEE------EEEEECCCCCEEEECCCE T ss_conf 49997363289997848860489588786403556644598078797488873299------999961563327724973 Q ss_pred EEEEEEEECCCC Q ss_conf 899999763766 Q gi|254780480|r 328 IGRLKYESMDGE 339 (367) Q Consensus 328 i~~l~~~~~~~~ 339 (367) ||||++.++..+ T Consensus 106 iaQlv~~~~~~~ 117 (136) T d3ehwa1 106 IAQLICERIFYP 117 (136) T ss_dssp EEEEEEEEBCCC T ss_pred EEEEEECCCCCE T ss_conf 899998167852 No 17 >d1sixa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Mycobacterium tuberculosis, rv2697c [TaxId: 1773]} Probab=98.46 E-value=8.3e-07 Score=61.29 Aligned_cols=86 Identities=19% Similarity=0.267 Sum_probs=67.4 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCC---CCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC-CCCEEEEC Q ss_conf 3998899789998633444283401644530433---3421342160456886654345667504788617-88889947 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHS---IGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS-SVPFVLEH 324 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~---~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~-~~p~~l~~ 324 (367) .++|.|++..+..|-..+.+|+++.+...|.+.. -|......+|.+|+||.|.+. ..|..-+ +.|+.++. T Consensus 43 d~~i~p~~~~~i~tgi~~~~p~g~~~~i~~RSs~~~k~gl~l~n~~GiID~dYrGel~------v~l~N~~~~~~~~i~~ 116 (153) T d1sixa_ 43 DVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIK------VALINLDPAAPIVVHR 116 (153) T ss_dssp CEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEETTSSEEEETTCCSCCE------EEEEECCSSCCEEECT T ss_pred CEEECCCCEEEEEECCEEEECCCCEEEECCCCHHHHCCCCEEECCCCEEECCCCCCEE------EEEEECCCCCCEEECC T ss_conf 1483776069999365732046855525065434220574970688477546688308------9999699885769858 Q ss_pred CCEEEEEEEEECCCCC Q ss_conf 9888999997637664 Q gi|254780480|r 325 GQIIGRLKYESMDGEP 340 (367) Q Consensus 325 g~~i~~l~~~~~~~~p 340 (367) |++||||++.+..... T Consensus 117 G~RIaQlv~~~~~~~~ 132 (153) T d1sixa_ 117 GDRIAQLLVQRVELVE 132 (153) T ss_dssp TCEEEEEEEEECCCCC T ss_pred CCCEEEEEEEECCCCE T ss_conf 9819999971047515 No 18 >d2bsya2 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Probab=98.40 E-value=1.2e-06 Score=60.35 Aligned_cols=98 Identities=11% Similarity=-0.075 Sum_probs=67.4 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEE--EEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCC Q ss_conf 3998899789998633444283401644--53043334213421604568866543456675047886178888994798 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEM--IPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQ 326 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~--~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~ 326 (367) .++|+|+++.+..|.+++.+|+++++.+ |++.++-|.. ++.+ +|+.|.+. ..|-+.++.|+.++.|+ T Consensus 21 ~~~I~P~~~~~v~tgi~~~ip~g~~~~i~~RSsla~kGl~-v~~~----~~~~Gei~------v~l~N~s~~~~~I~~G~ 89 (136) T d2bsya2 21 DLALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGLAMQGIL-VKPC----RWRRGGVD------VSLTNFSDQTVFLNKYR 89 (136) T ss_dssp CEEECTTCEEEEEECSCCCCCTTEEEEEECCHHHHHTTEE-ECCE----ECBTTBEE------EEEEECSSSCEEECTTC T ss_pred CEEECCCCEEEECCEEEEEECCCEEEEEEECCCCCCCCEE-EECC----CEECCEEE------EEEEECCCCCEEECCCC T ss_conf 8799999989604568998079808999800210308979-9199----76566799------99998989778986999 Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88999997637664222375434723266677 Q gi|254780480|r 327 IIGRLKYESMDGEPERLYGEARGSHYQSQALK 358 (367) Q Consensus 327 ~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl~ 358 (367) +||||+|.+-...|.. |..-..+.+.+.+.+ T Consensus 90 RIaQlVf~~~~~~~~~-~~~~~~~~~~~~~~~ 120 (136) T d2bsya2 90 RFCQLVYLHKHHLTSF-YSPHSDAGVLGPRSL 120 (136) T ss_dssp EEEEEEEEEGGGEESC-CSTTEETTTTCSSSE T ss_pred EEEEEEEEECCCCCEE-EECCCCCCCCCCCCC T ss_conf 8999999844434374-202346346488855 No 19 >d1euwa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Escherichia coli [TaxId: 562]} Probab=98.40 E-value=2.4e-06 Score=58.24 Aligned_cols=86 Identities=20% Similarity=0.278 Sum_probs=67.7 Q ss_pred CCEEEECCCCEEEEEEEEEEECC-CCCEEEEEEECCCC--CCEEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEE Q ss_conf 75399889978999863344428-34016445304333--421342-160456886654345667504788617888899 Q gi|254780480|r 247 EGQFILDPNEFYIFASREFIQIP-PSLVAEMIPYDHSI--GEFRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVL 322 (367) Q Consensus 247 ~~~~~l~p~~F~l~~s~E~v~iP-~~~aae~~~~~~~~--g~~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l 322 (367) +..+.++|++-.+..|--.+.+| +++.+...+.++.. +-..++ -+|.+|+||.|.+. ..|...++.|+.+ T Consensus 38 ~~~i~i~p~~~~~i~tGi~~~~p~~~~~~~i~~RSs~~~K~~l~~~n~~GvID~dYrGei~------v~l~N~~~~~~~i 111 (136) T d1euwa_ 38 NDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLM------ISVWNRGQDSFTI 111 (136) T ss_dssp SSCEEECTTCEEEEEEEEEEECCCTTEEEEEEECHHHHHHHCEEETTSSEEECTTCCSEEE------EEEEECSSSCEEE T ss_pred CCCEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEE------EEEEECCCCEEEE T ss_conf 7706229996398620389984389816799701573234017515644533467788459------9999799972698 Q ss_pred ECCCEEEEEEEEECCC Q ss_conf 4798889999976376 Q gi|254780480|r 323 EHGQIIGRLKYESMDG 338 (367) Q Consensus 323 ~~g~~i~~l~~~~~~~ 338 (367) +.|+|||||+|.+... T Consensus 112 ~~GdRIaQlv~~~~~~ 127 (136) T d1euwa_ 112 QPGERIAQMIFVPVVQ 127 (136) T ss_dssp CTTCEEEEEEEEECCC T ss_pred CCCCEEEEEEEEECCC T ss_conf 6999899999867471 No 20 >d1vyqa1 b.85.4.1 (A:1-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Plasmodium falciparum [TaxId: 5833]} Probab=97.94 E-value=2.2e-05 Score=52.03 Aligned_cols=77 Identities=12% Similarity=0.064 Sum_probs=51.0 Q ss_pred CEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEEE Q ss_conf 789998633444283401644530433342-1342-16045688665434566750478861788889947988899999 Q gi|254780480|r 256 EFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQIIGRLKY 333 (367) Q Consensus 256 ~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i~~l~~ 333 (367) .+....+...+..|+++.+-..|.++.... +++. ..|.+|+||.|.+. +.|-..++.|+.++.|+|||||++ T Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~pRSslaK~~l~l~n~~GIIDsgYrGei~------v~l~N~~~~~~~I~~GdRIaQlv~ 141 (159) T d1vyqa1 68 KSENKKKDDDKSNIVNTSFLLFPRSSISKTPLRLANSIGLIDAGYRGEII------AALDNTSDQEYHIKKNDKLVQLVS 141 (159) T ss_dssp -------------CEECCEEEEECGGGGGTTEEETTSSEEECTTCCSEEE------EEEEECSSSCEEECTTCCCEEEEC T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCEEE------EEEEECCCCCEEECCCCEEEEEEE T ss_conf 23344444433467881699973488001572564647667976663699------999968997569779994999996 Q ss_pred EECCC Q ss_conf 76376 Q gi|254780480|r 334 ESMDG 338 (367) Q Consensus 334 ~~~~~ 338 (367) .+... T Consensus 142 ~~~~~ 146 (159) T d1vyqa1 142 FTGEP 146 (159) T ss_dssp TTCCC T ss_pred EECCC T ss_conf 21486 No 21 >d2caya1 b.55.1.12 (A:1-99,A:252-282) Vacuolar protein sorting protein 36, VPS36 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=50.66 E-value=2.5 Score=18.99 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=13.1 Q ss_pred HHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEC Q ss_conf 8664311355777539988997899986334442 Q gi|254780480|r 235 DFWDPLFSWDAPEGQFILDPNEFYIFASREFIQI 268 (367) Q Consensus 235 dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~i 268 (367) +||.++..+ .+|.-+|.+||. ++.++..|.+ T Consensus 2 ~~w~~~~~t--~sg~p~L~~~E~-~l~~qd~V~L 32 (130) T d2caya1 2 EYWHYVETT--SSGQPLLREGEK-DIFIDQSVGL 32 (130) T ss_dssp GTCEECCBC--TTSCBCCCTTCC-EEEEEEEEEE T ss_pred CCCCHHHCC--CCCCEECCCCEE-EEEEECCEEE T ss_conf 632110012--689767159907-9998277787 No 22 >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} Probab=48.06 E-value=6.9 Score=16.10 Aligned_cols=35 Identities=9% Similarity=0.219 Sum_probs=18.3 Q ss_pred ECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC Q ss_conf 47988899999763766422237543472326667 Q gi|254780480|r 323 EHGQIIGRLKYESMDGEPERLYGEARGSHYQSQAL 357 (367) Q Consensus 323 ~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl 357 (367) .+|+.||.+.|.+.+...-..+-.....+|+|||+ T Consensus 18 ~~g~~vg~~~~~~~~~~~~~i~~~~V~p~~RG~Gi 52 (102) T d1r57a_ 18 DENNALAEITYRFVDNNEINIDHTGVSDELGGQGV 52 (102) T ss_dssp SSTTEEEEEEEEESSSSEEEEEEEEECCSSSTTCT T ss_pred ECCCEEEEEEEEECCCCEEEEEEEEECHHHCCCCH T ss_conf 48960799999982799899999998967779548 No 23 >d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]} Probab=45.14 E-value=4.8 Score=17.16 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=27.6 Q ss_pred CCCCCCCHHHHHHHHHCCCEEECCCCCHHHCC Q ss_conf 98761586899999987984981789865657 Q gi|254780480|r 1 MNKGVLPDKAIATLAERGDIVSEHPLEKNQIQ 32 (367) Q Consensus 1 ~~~GILsd~~I~~li~~g~I~i~~p~~~~QIQ 32 (367) |++.+||+.+++..-++|.+++..-+++++++ T Consensus 6 ~~~~~Lt~eq~~~f~~~Gyvvi~~~l~~~~~~ 37 (296) T d2a1xa1 6 LDNNVLTLEQRKFYEENGFLVIKNLVPDADIQ 37 (296) T ss_dssp CCC--CCSTHHHHHHHHSEEEETTCSCHHHHH T ss_pred CCCCCCCHHHHHHHHHCCEEECCCCCCHHHHH T ss_conf 68899999999999879999815958999999 No 24 >d1go3e2 d.230.1.1 (E:1-78) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=31.27 E-value=10 Score=15.05 Aligned_cols=69 Identities=17% Similarity=0.351 Sum_probs=39.9 Q ss_pred EEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC-CCCEEEE-CCCEEEEEEE Q ss_conf 899986334442834016445304333421342160456886654345667504788617-8888994-7988899999 Q gi|254780480|r 257 FYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS-SVPFVLE-HGQIIGRLKY 333 (367) Q Consensus 257 F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~-~~p~~l~-~g~~i~~l~~ 333 (367) |++..=...|+|||++-++. ......-..+.-|+|-+++..|.-+ +|+++.. ....++. +|...-+..| T Consensus 2 F~~~~l~d~v~i~P~~~g~~-~~~~i~~~L~~~~egkv~~~~G~ii-------~v~di~~i~eG~I~~gdG~~~~~V~F 72 (78) T d1go3e2 2 YKILEIADVVKVPPEEFGKD-LKETVKKILMEKYEGRLDKDVGFVL-------SIVDVKDIGEGKVVHGDGSAYHPVVF 72 (78) T ss_dssp EEEEEEEEEEEECGGGTTSC-HHHHHHHHHHHHHTTCEETTTEEEE-------EEEEEEEECCCBCCTTCCSEEEEEEE T ss_pred CEEEEEEEEEEECHHHHCCC-HHHHHHHHHHHHHCCCCCCCCCEEE-------EEEEEEEECCCEEECCCCCEEEEEEE T ss_conf 09999999999998993957-8999999998985894948857999-------99880682389898698889999999 Done!