RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780480|ref|YP_003064893.1| 2'-deoxycytidine 5'-triphosphate deaminase [Candidatus Liberibacter asiaticus str. psy62] (367 letters) >2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} (A:1-174) Length = 174 Score = 125 bits (316), Expect = 7e-30 Identities = 99/160 (61%), Positives = 115/160 (71%) Query: 4 GVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKI 63 G+L D AI L + SE L+ +Q+QPAS+DLRL SKAYRVRASF+P V DK+ Sbjct: 11 GILADGAIRALFAGDKLKSEADLDVDQVQPASLDLRLGSKAYRVRASFMPGPGTRVIDKL 70 Query: 64 KHFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRS 123 F L E+DLS G VL+ CVYIVPLMESL L +SA ANPKSS GR+D+F RV+ D + Sbjct: 71 NRFSLHEVDLSQGAVLETGCVYIVPLMESLALPADMSASANPKSSTGRLDIFTRVMTDNA 130 Query: 124 QEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFVK 163 QEFD I Y+GPLYLEI PRTFPIVVR GSRLSQIRF Sbjct: 131 QEFDKIPAGYTGPLYLEISPRTFPIVVRRGSRLSQIRFRI 170 Score = 43.8 bits (103), Expect = 4e-05 Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 13/142 (9%) Query: 198 SVDLK-GNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDPNE 256 S+DL+ G++ + ++ + ++ D +G +L+ Sbjct: 42 SLDLRLGSKAYRVRASFMPGPGTRVIDKLNRFSLHE----------VDLSQG-AVLETGC 90 Query: 257 FYIFASREFIQIPPSLVAEMIPYDH-SIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVR 315 YI E + +P + A P + F + G + Sbjct: 91 VYIVPLMESLALPADMSASANPKSSTGRLDIFTRVMTDNAQEFDKIPAGYTGPLYLEISP 150 Query: 316 SSVPFVLEHGQIIGRLKYESMD 337 + P V+ G + ++++ Sbjct: 151 RTFPIVVRRGSRLSQIRFRIGH 172 >2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} (A:175-370) Length = 196 Score = 115 bits (288), Expect = 1e-26 Identities = 107/197 (54%), Positives = 132/197 (67%), Gaps = 7/197 (3%) Query: 169 SQEELSALHELSPLVQDGLRDFSGKGVALSVDLK-GNEIGKKSIIGYRAKRHTAAIDVDS 227 ++ E+ LHE LV + +G G+ALS+DLK E G +IGYR K HTA +DVD Sbjct: 2 NESEVLKLHETETLVASENPNVTGGGIALSIDLKGFGENG---LIGYRGKHHTAVVDVDK 58 Query: 228 ENKYDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFR 287 + ++D DFW+PLF ILDP+EFYI SRE + +PP AEM P+D +GEFR Sbjct: 59 KAQHDVLDFWEPLF-ARGRAE-LILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFR 116 Query: 288 VHYAGFFDPGFGCVLPQEVGAKAVLEVR-SSVPFVLEHGQIIGRLKYESMDGEPERLYGE 346 VHYAGFFDPGFG G++AVLEVR VPF+LEHGQI+GRL YE M +PE LYG Sbjct: 117 VHYAGFFDPGFGHAQAGGTGSRAVLEVRSHEVPFILEHGQIVGRLVYEHMLEKPEGLYGT 176 Query: 347 ARGSHYQSQALKLSKHF 363 GS+YQ+Q LKLSKHF Sbjct: 177 GLGSNYQAQGLKLSKHF 193 Score = 95.9 bits (238), Expect = 8e-21 Identities = 22/165 (13%), Positives = 52/165 (31%), Gaps = 7/165 (4%) Query: 6 LPDKAIATLAERGDIVSE-HPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIK 64 L + + L E +V+ +P SIDL+ + + + + DK Sbjct: 1 LNESEVLKLHETETLVASENPNVTGGGIALSIDLKGFGENGLIGYRGKHHTAVVDVDKKA 60 Query: 65 HFKLRE------IDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARV 118 + + +LD + YI+ E++++ +A P + Sbjct: 61 QHDVLDFWEPLFARGRAELILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYA 120 Query: 119 IGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFVK 163 + + LE+ P ++ G + ++ + Sbjct: 121 GFFDPGFGHAQAGGTGSRAVLEVRSHEVPFILEHGQIVGRLVYEH 165 >1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} (A:) Length = 204 Score = 103 bits (258), Expect = 4e-23 Identities = 34/174 (19%), Positives = 58/174 (33%), Gaps = 22/174 (12%) Query: 5 VLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIK 64 +L DK I I+ + P K+ + P S D+ L + L +IK Sbjct: 2 ILSDKDIIDYVTSKRIIIK-PFNKDFVGPCSYDVTLGDEFIIYDDEVYDLSKELNYKRIK 60 Query: 65 HFKLREIDL---------------SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSI 109 + + E + L N ISA +SS+ Sbjct: 61 IKNSILVCPLNYNLTEEKINYFKEKYNVDYVVEGGVLGTTNEYIELPNDISAQYQGRSSL 120 Query: 110 GRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFVK 163 GR+ + + I + G + LEI+ P+++ R+ Q+ F K Sbjct: 121 GRVFLTSHQTAGW------IDAGFKGKITLEIVAFDKPVILYKNQRIGQLIFSK 168 Score = 75.4 bits (185), Expect = 1e-14 Identities = 25/203 (12%), Positives = 60/203 (29%), Gaps = 17/203 (8%) Query: 169 SQEELSALHELSPLVQDGLRD--FSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVD 226 S +++ ++ +++ + I + + + I + Sbjct: 4 SDKDIIDYVTSKRIIIKPFNKDFVGPCSYDVTLGDEF-IIYDDEVYDLSKELNYKRIKIK 62 Query: 227 SENKYDESDFWDPLFSW---DAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYD--H 281 + ++ + + E+I++P + A+ Sbjct: 63 NSILVCPLNYNLTEEKINYFKEKYN-VDYVVEGGVLGTTNEYIELPNDISAQYQGRSSLG 121 Query: 282 SIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPE 341 + AG+ D GF G + V P +L Q IG+L + + + Sbjct: 122 RVFLTSHQTAGWIDAGFK-------GKITLEIVAFDKPVILYKNQRIGQLIFSKLLSPAD 174 Query: 342 RLYGEARGSHYQ-SQALKLSKHF 363 Y E + S Y +++ S Sbjct: 175 VGYSERKTSKYAYQKSVMPSLIH 197 >3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, iodide phasing, hydrolase; 2.10A {Anaplasma phagocytophilum HZ} (A:) Length = 206 Score = 98.5 bits (245), Expect = 1e-21 Identities = 28/213 (13%), Positives = 62/213 (29%), Gaps = 18/213 (8%) Query: 151 RVGSRLSQIRFVKERKFCSQEELSALHELSPLVQDGLRDFSGKGV-ALSVDLKGNEIGKK 209 +G+ +Q + + ++ + G GV + + G + Sbjct: 8 HMGTLEAQTQGPGSMSVMPDHWIKERALKDGMISPFVDHKEGTGVLSYGLSSYGYDARLD 67 Query: 210 SIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIP 269 + A H+ +D + ++ D I+ PN F + + E+ IP Sbjct: 68 NKFKIFANTHSVVVDPKNFSQDSFVDREG---------DFCIIPPNSFMLAKTVEYFNIP 118 Query: 270 PSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQIIG 329 ++ + V +PG+ + S +P + + Sbjct: 119 RDVMVVCVGKSTYARCGIVVNVTPLEPGWSGYV------TLEFSNTSPLPVKVYAFEGAC 172 Query: 330 RLKYESMDGEPERLYGEARGSHYQ-SQALKLSK 361 + + S + Y E G Y + L Sbjct: 173 QFLFFSGKERCSKSYDE-AGGKYMGQSDVTLPI 204 Score = 71.6 bits (175), Expect = 1e-13 Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 24/169 (14%) Query: 5 VLPDKAIATLAERGDIVSE-------HPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDG 57 V+PD I A + ++S + + D RL +K + +D Sbjct: 24 VMPDHWIKERALKDGMISPFVDHKEGTGVLSYGLSSYGYDARLDNKFKIFANTHSVVVD- 82 Query: 58 LVSDKIKHFKLREIDL--SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVF 115 K+F ++ N + +E N+ + KS+ R + Sbjct: 83 -----PKNFSQDSFVDREGDFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYARCGIV 137 Query: 116 ARVIGDRSQEFDSISPNYSGPLYLEIL-PRTFPIVVRVGSRLSQIRFVK 163 V + P +SG + LE P+ V Q F Sbjct: 138 VNV--------TPLEPGWSGYVTLEFSNTSPLPVKVYAFEGACQFLFFS 178 >1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} (A:) Length = 193 Score = 96.2 bits (239), Expect = 6e-21 Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 14/167 (8%) Query: 5 VLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKI- 63 L D+ I + G + +I A++D+RL +K R ID Sbjct: 2 RLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEV 61 Query: 64 ----KHFKLREIDLS--GGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFAR 117 EI L L + + +ES+ L + + + +SS+ R+ + Sbjct: 62 SAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVH 121 Query: 118 VIGDRSQEFDSISPNYSGPLYLEIL-PRTFPIVVRVGSRLSQIRFVK 163 V R I P +SG + LE P+ +R G + + F Sbjct: 122 VTAHR------IDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEP 162 Score = 80.0 bits (197), Expect = 4e-16 Identities = 37/199 (18%), Positives = 61/199 (30%), Gaps = 15/199 (7%) Query: 169 SQEELSALHELSPLVQDGLRDFSGKGVALSVDLK-GNEIGKKSIIGYRAKRHTAAIDVDS 227 ++ A + L + A +VD++ GN+ + D S Sbjct: 4 CDRDIEAWLDEGRLSINPRPPVERINGA-TVDVRLGNKFRTFRGHTAAFIDLSGPKDEVS 62 Query: 228 ENKYDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDH--SIGE 285 L E F L P E + + E + +P LV + +G Sbjct: 63 AALDRVMSDEIVLD---EGEA-FYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGL 118 Query: 286 FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYG 345 A DPG+ + +P L G +IG L +E + G R Y Sbjct: 119 MVHVTAHRIDPGWSGCI------VLEFYNSGKLPLALRPGMLIGALSFEPLSGPAVRPYN 172 Query: 346 EARGSHYQ-SQALKLSKHF 363 + Y+ Q S+ Sbjct: 173 RREDAKYRNQQGAVASRID 191 >2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis H37RV} PDB: 2qlp_A* (A:) Length = 190 Score = 92.7 bits (230), Expect = 6e-20 Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 9/160 (5%) Query: 5 VLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIK 64 +L D+ + G + + P + +QP+SID+RL +RV + + + Sbjct: 2 LLSDRDLRAEISSGRLGID-PFDDTLVQPSSIDVRLDCL-FRVFNNTRYTHIDPAKQQDE 59 Query: 65 HFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQ 124 L + VL + +E L + ++ KSS+GR+ + Sbjct: 60 LTSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGF-- 117 Query: 125 EFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFVK 163 I P +SG + LE+ PI + G ++ Q+ ++ Sbjct: 118 ----IDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLR 153 Score = 65.4 bits (159), Expect = 1e-11 Identities = 45/201 (22%), Positives = 70/201 (34%), Gaps = 27/201 (13%) Query: 169 SQEELSALHELSPLVQDGLRDFSGKGVAL-SVDLK-GNEIGKKSIIGYRAKRHTAAIDVD 226 S +L A L D F V S+D++ +R +T +D Sbjct: 4 SDRDLRAEISSGRLGID---PFDDTLVQPSSIDVRLDCL--------FRVFNNTRYTHID 52 Query: 227 SENKYDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI--G 284 + DE + F+L P EF + ++ E +P +L + G Sbjct: 53 PAKQQDELTSLVQPVDGE----PFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLG 108 Query: 285 EFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLY 344 AGF DPGF + L +++P L G IG+L + E Y Sbjct: 109 LLTHSTAGFIDPGFS----GHI--TLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPY 162 Query: 345 GE-ARGSHYQ-SQALKLSKHF 363 G GS YQ + S+ + Sbjct: 163 GSSRAGSKYQGQRGPTPSRSY 183 >2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A (A:) Length = 169 Score = 81.9 bits (202), Expect = 1e-16 Identities = 28/159 (17%), Positives = 50/159 (31%), Gaps = 20/159 (12%) Query: 5 VLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIK 64 +L ++I L + + ++ DLR+ + K Sbjct: 12 ILSHQSIKNLLGKV----ILNYSEENVRENGYDLRICGD-KYYELVQGAELPE------K 60 Query: 65 HFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQ 124 LREI+ +L AN Y+ E N ++ KS++ R A Sbjct: 61 KATLREIEFKERAILSANHTYLFESCEEFNXPADLAVLITLKSTLARNGFLAPP------ 114 Query: 125 EFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFVK 163 I Y G + + I ++ G + F+K Sbjct: 115 --TVIDAGYKGKVNVAITAVY-NSSLKKGXATHHLIFLK 150 Score = 49.5 bits (118), Expect = 6e-07 Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 9/102 (8%) Query: 245 APEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQ 304 E IL N Y+F S E P L + + D G+ + Sbjct: 69 FKER-AILSANHTYLFESCEEFNXPADLAVLITLKSTLARNGFLAPPTVIDAGYKGKV-- 125 Query: 305 EVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE 346 + + + L+ G L + +D ERLY Sbjct: 126 ------NVAITAVYNSSLKKGXATHHLIFLKLDKPTERLYNG 161 >1vyq_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; drug design, dutpase, deoxyuridine nucleotidohydrolase, malaria; HET: DUX; 2.4A {Plasmodium falciparum} (A:) Length = 173 Score = 81.6 bits (201), Expect = 1e-16 Identities = 15/159 (9%), Positives = 36/159 (22%), Gaps = 19/159 (11%) Query: 6 LPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKH 65 L ++ + + + +DL + + K Sbjct: 3 LKIVCLSDEVREMYK----NHKTHHEGDSGLDLFIVKD-------EVLKPKSTTFVK-LG 50 Query: 66 FKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQE 125 K + + + S P+SSI + + Sbjct: 51 IKAIALQYKSNYYYKCEKSENKKKDDDKSNIVNTSFLLFPRSSISKTPLRLANSIGL--- 107 Query: 126 FDSISPNYSGPLYLEILPRTF-PIVVRVGSRLSQIRFVK 163 I Y G + + + ++ +L Q+ Sbjct: 108 ---IDAGYRGEIIAALDNTSDQEYHIKKNDKLVQLVSFT 143 Score = 41.5 bits (97), Expect = 2e-04 Identities = 13/117 (11%), Positives = 31/117 (26%), Gaps = 14/117 (11%) Query: 246 PEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDH--SIGEFRVHYAGFFDPGF-GCVL 302 + + + + + + P + G D G+ G + Sbjct: 58 YKSNYYYKCEKSENKKKDDDKSNIVNTSFLLFPRSSISKTPLRLANSIGLIDAGYRGEI- 116 Query: 303 PQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQSQ 355 A L+ S + ++ + +L + + L E +RG Sbjct: 117 ------IAALDNTSDQEYHIKKNDKLVQLVSFTGEPLSFELVEELDETSRGEGGFGS 167 >2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A (A:) Length = 169 Score = 78.5 bits (193), Expect = 1e-15 Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 20/162 (12%) Query: 28 KNQIQPASIDLRLSSKAYRVRASFLPNID------GLVSDKIKHFKLREIDLSG--GTVL 79 +P+ +L +S P V DLS + + Sbjct: 5 ACVNEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKV 64 Query: 80 DANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYL 139 A ++P S+ + G A P+S + G I +Y GP+ + Sbjct: 65 PARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGV-------IDADYRGPVGV 117 Query: 140 EILPRTF-PIVVRVGSRLSQIRFVKERKFCSQEELSALHELS 180 + + V+ G R++Q+ K ++ + +L Sbjct: 118 ILFNHSDADFEVKFGDRIAQLIIEK----IVTPDVVEVDDLD 155 Score = 38.0 bits (88), Expect = 0.002 Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 14/115 (12%) Query: 245 APEGQFILDPNEFYIFASREFIQIPPSLVAEMIP-YDHSIGEFRVHYAGFFDPGF-GCVL 302 + + + + I +P A + P + AG D + G V Sbjct: 58 SAVD-SKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPV- 115 Query: 303 PQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQ 353 +L S F ++ G I +L E + + RG Sbjct: 116 ------GVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGF 164 >3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolism; HET: DUP; 1.20A {Mycobacterium tuberculosis} PDB: 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A* (A:) Length = 174 Score = 76.1 bits (187), Expect = 6e-15 Identities = 19/150 (12%), Positives = 46/150 (30%), Gaps = 15/150 (10%) Query: 16 ERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSG 75 + + + L+ LP+ + ++ + Sbjct: 2 GSSHHHHH-HSSGLVPRGSHMSTTLAIV-RLDPGLPLPSRAHDGDAGV------DLYSAE 53 Query: 76 GTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSG 135 L +V ++ + G+ +P+S + + V +I Y G Sbjct: 54 DVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVN-----SPGTIDAGYRG 108 Query: 136 PLYLEILPRT--FPIVVRVGSRLSQIRFVK 163 + + ++ PIVV G R++Q+ + Sbjct: 109 EIKVALINLDPAAPIVVHRGDRIAQLLVQR 138 Score = 38.8 bits (90), Expect = 0.001 Identities = 17/116 (14%), Positives = 38/116 (32%), Gaps = 12/116 (10%) Query: 245 APEGQFILDPNEFYIFASREFIQIPPSLVAEMIP---YDHSIGEFRVHYAGFFDPGF-GC 300 + E L P + + + +P +V + P +G V+ G D G+ G Sbjct: 51 SAED-VELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGE 109 Query: 301 VLPQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE-ARGSHYQSQ 355 + ++ + + P V+ G I +L + ++ + Sbjct: 110 IKVA------LINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTS 159 >3ehw_A DUTP pyrophosphatase; jelly-roll, FULL-length C-terminal ARM, enzyme-ligand complex, hydrolase; HET: DUP; 1.80A {Homo sapiens} (A:) Length = 164 Score = 74.9 bits (184), Expect = 1e-14 Identities = 18/157 (11%), Positives = 43/157 (27%), Gaps = 18/157 (11%) Query: 25 PLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDANCV 84 + +PA + A + P + ++ + + Sbjct: 10 ISPSKRARPAEVGGMQLRFARLSEHATAPTRGSARAAGY------DLYSAYDYTIPPMEK 63 Query: 85 YIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPR 144 +V + L +G P+S + I +Y G + + + Sbjct: 64 AVVKTDIQIALPSGCYGRVAPRSGLAA-------KHFIDVGAGVIDEDYRGNVGVVLFNF 116 Query: 145 TF-PIVVRVGSRLSQIRFVKERKFCSQEELSALHELS 180 V+ G R++Q+ + E+ + L Sbjct: 117 GKEKFEVKKGDRIAQLICER----IFYPEIEEVQALD 149 Score = 41.8 bits (98), Expect = 1e-04 Identities = 23/166 (13%), Positives = 42/166 (25%), Gaps = 33/166 (19%) Query: 198 SVDL-KGNE--IGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDP 254 V + + + + R A D+ + + + P Sbjct: 20 EVGGMQLRFARLSEHATAPTRGSARAAGYDLY------------------SAYD-YTIPP 60 Query: 255 NEFYIFASREFIQIPPSLVAEMIP-YDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLE 313 E + + I +P + P + F AG D + + VL Sbjct: 61 MEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNV------GVVLF 114 Query: 314 VRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQSQ 355 F ++ G I +L E + RGS Sbjct: 115 NFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFGS 160 >2d4n_A DU; jelly roll, hydrolase; HET: UPR; 1.53A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A* (A:) Length = 152 Score = 74.9 bits (184), Expect = 2e-14 Identities = 13/162 (8%), Positives = 39/162 (24%), Gaps = 18/162 (11%) Query: 194 GVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILD 253 G A + +++ + + L + + Sbjct: 5 GPAPGPETS-----LWGSQLCSSQQKQPISKLT---RATPGSAGLDLC---STSHTVLTP 53 Query: 254 PNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLE 313 ++ + +PP+ ++ + Y G D + + ++ Sbjct: 54 EMGPQALSTGIYGPLPPNTFGLILGRSSITMKGLQVYPGVIDNDYTGEIK-------IMA 106 Query: 314 VRSSVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ 355 + + G I +L + ++ RG Sbjct: 107 KAVNNIVTVSQGNRIAQLILLPLIETDNKVQQPYRGQGSFGS 148 Score = 64.2 bits (156), Expect = 3e-11 Identities = 17/140 (12%), Positives = 34/140 (24%), Gaps = 16/140 (11%) Query: 28 KNQIQPA-SIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLS---GGTVLDANC 83 K PA + L + +DL + Sbjct: 1 KRVEGPAPGPETSLWGSQLC----SSQQKQPISKLTRATPGSAGLDLCSTSHTVLTPEMG 56 Query: 84 VYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILP 143 + L +SSI + I +Y+G + + Sbjct: 57 PQALSTGIYGPLPPNTFGLILGRSSITMKGLQVYP--------GVIDNDYTGEIKIMAKA 108 Query: 144 RTFPIVVRVGSRLSQIRFVK 163 + V G+R++Q+ + Sbjct: 109 VNNIVTVSQGNRIAQLILLP 128 >3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster} (A:) Length = 160 Score = 73.8 bits (181), Expect = 3e-14 Identities = 22/162 (13%), Positives = 50/162 (30%), Gaps = 18/162 (11%) Query: 20 IVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVL 79 + S + + ID + A + P + + ++ + V+ Sbjct: 1 MPSTDFADIPAAKKMKIDTCVLRFAKLTENALEPVRGSAKAAGV------DLRSAYDVVV 54 Query: 80 DANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYL 139 A IV + + G P+S + + G + +Y G L + Sbjct: 55 PARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFIDVGAGV-------VDEDYRGNLGV 107 Query: 140 EILPRTF-PIVVRVGSRLSQIRFVKERKFCSQEELSALHELS 180 + + V+ G R++Q + +L + +L Sbjct: 108 VLFNHSDVDFEVKHGDRIAQFICER----IFYPQLVMVDKLE 145 Score = 36.8 bits (85), Expect = 0.005 Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 35/165 (21%) Query: 198 SVDLK-GNE--IGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDP 254 +D + + ++ R A +D+ + ++ Sbjct: 16 KIDTCVLRFAKLTENALEPVRGSAKAAGVDLR------------------SAYD-VVVPA 56 Query: 255 NEFYIFASREFIQIPPSLVAEMIP-YDHSIGEFRVHYAGFFDPGF-GCVLPQEVGAKAVL 312 I + +Q+P + P ++ F AG D + G + VL Sbjct: 57 RGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFIDVGAGVVDEDYRGNL-------GVVL 109 Query: 313 EVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQ 353 S V F ++HG I + E + + + RG Sbjct: 110 FNHSDVDFEVKHGDRIAQFICERIFYPQLVMVDKLEDTERGEAGF 154 >3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphatase, DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A (A:) Length = 167 Score = 59.6 bits (144), Expect = 6e-10 Identities = 14/163 (8%), Positives = 42/163 (25%), Gaps = 17/163 (10%) Query: 198 SVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFS--WD--APEGQFILD 253 + + + + + + +D A + + Sbjct: 9 HHSSG---LVPRGSHM--TATSDKVLKIQLRSASATVPTKGSATAAGYDIYASQD-ITIP 62 Query: 254 PNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHY-AGFFDPGFGCVLPQEVGAKAVL 312 + ++ +P + P + + AG D + EV Sbjct: 63 AMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTGAGVVDRDYT----GEVKVVLF- 117 Query: 313 EVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ 355 S F ++ G + +L E + + + + ++ + Sbjct: 118 -NHSQRDFAIKKGDRVAQLILEKIVDDAQIVVVDSLEESARGA 159 Score = 59.2 bits (143), Expect = 8e-10 Identities = 18/158 (11%), Positives = 45/158 (28%), Gaps = 16/158 (10%) Query: 30 QIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGG--------TVLDA 81 L + + A+ + + + + G + A Sbjct: 4 SHHHHHHSSGLVPRGSHMTATSDKVLKIQLRSASATVPTKGSATAAGYDIYASQDITIPA 63 Query: 82 NCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEI 141 +V S + G P+S + + G + +Y+G + + + Sbjct: 64 MGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTGAG-------VVDRDYTGEVKVVL 116 Query: 142 LPRTF-PIVVRVGSRLSQIRFVKERKFCSQEELSALHE 178 + ++ G R++Q+ K + +L E Sbjct: 117 FNHSQRDFAIKKGDRVAQLILEKIVDDAQIVVVDSLEE 154 >1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} (A:) Length = 136 Score = 57.2 bits (138), Expect = 3e-09 Identities = 17/115 (14%), Positives = 29/115 (25%), Gaps = 11/115 (9%) Query: 245 APEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQ 304 A + L P E + + + +P +I + G D G+ Sbjct: 22 AAKE-IHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLGGVIDEGY------ 74 Query: 305 EVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQSQ 355 ++ S L Q I +L E RG + Sbjct: 75 RGEIGVIMINVSRKSITLMERQKIAQLIILPCKHEVLEQGKVVMDSERGDNGYGS 129 Score = 38.3 bits (89), Expect = 0.001 Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 13/104 (12%) Query: 78 VLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPL 137 L V ++P L L G KSSIG + I Y G + Sbjct: 27 HLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLG--------GVIDEGYRGEI 78 Query: 138 YLEILPRT-FPIVVRVGSRLSQIRFVKERKFCSQEELSALHELS 180 + ++ + I + +++Q+ + C E L + Sbjct: 79 GVIMINVSRKSITLMERQKIAQLIILP----CKHEVLEQGKVVM 118 >3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} (A:) Length = 165 Score = 53.0 bits (127), Expect = 5e-08 Identities = 20/145 (13%), Positives = 43/145 (29%), Gaps = 19/145 (13%) Query: 22 SEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGG--TVL 79 + + + + L K A P D+S V+ Sbjct: 2 ASMTGGQQMGRGSEFMSSLLVKKLVESA-TTP--------MRGSEGAAGYDISSVEDVVV 52 Query: 80 DANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYL 139 A V S+ + +G P+S + I +Y+G + + Sbjct: 53 PAMGRIAVSTGISIRVPDGTYGRIAPRSGLAY-------KYGIDVLAGVIDEDYTGEVKV 105 Query: 140 EILPRTF-PIVVRVGSRLSQIRFVK 163 + T +++ G R++Q+ + Sbjct: 106 ILYNTTERDYIIKKGDRIAQLILEQ 130 Score = 36.8 bits (85), Expect = 0.004 Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 12/121 (9%) Query: 250 FILDPNEFYIFASREFIQIPPSLVAEMIP-YDHSIGEFRVHYAGFFDPGFGCVLPQEVGA 308 ++ ++ I++P + P + AG D + + Sbjct: 50 VVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAGVIDEDYTGEV------ 103 Query: 309 KAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQ-SQALKLSKHF 363 K +L + ++++ G I +L E + + + ARGS S + H Sbjct: 104 KVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLDLSDTARGSGGFGSTGILEHHHH 163 Query: 364 H 364 H Sbjct: 164 H 164 >1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} (A:) Length = 134 Score = 46.1 bits (109), Expect = 7e-06 Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 10/110 (9%) Query: 250 FILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAK 309 ++ ++ I + IQ+PP+ + + + G D G+ + + Sbjct: 27 IMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGLLINGGIIDEGYTGEI------Q 80 Query: 310 AVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQSQ 355 + L GQ +L + + E RG Sbjct: 81 VICTNIGKSNIKLIEGQKFAQLIILQHHSNSRQPWDENKISQRGDKGFGS 130 Score = 36.0 bits (83), Expect = 0.008 Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 9/87 (10%) Query: 78 VLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPL 137 ++ + I+P + + + KSS+ + + I Y+G + Sbjct: 28 MIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGLLING--------GIIDEGYTGEI 79 Query: 138 YLEIL-PRTFPIVVRVGSRLSQIRFVK 163 + I + G + +Q+ ++ Sbjct: 80 QVICTNIGKSNIKLIEGQKFAQLIILQ 106 >2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} (A:117-244) Length = 128 Score = 43.3 bits (102), Expect = 5e-05 Identities = 13/111 (11%), Positives = 20/111 (18%), Gaps = 12/111 (10%) Query: 245 APEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGF-GCVLP 303 P+ L P++ P + S G G V Sbjct: 22 LPKD-LALFPHQTVSVTLTVPPPSIPHHRPTIFG--RS-GLAMQGILVKPCRWRRGGV-- 75 Query: 304 QEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQS 354 L S L + +L Y + Sbjct: 76 -----DVSLTNFSDQTVFLNKYRRFCQLVYLHKHHLTSFYSPHSDAGVLGP 121 Score = 34.1 bits (78), Expect = 0.027 Identities = 7/87 (8%), Positives = 20/87 (22%), Gaps = 12/87 (13%) Query: 78 VLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPL 137 L + V L +S + + G + Sbjct: 27 ALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGLAMQGI-----------LVKPCRWRRGGV 75 Query: 138 YLEILPRTF-PIVVRVGSRLSQIRFVK 163 + + + + + R Q+ ++ Sbjct: 76 DVSLTNFSDQTVFLNKYRRFCQLVYLH 102 >2baz_A YOSS, hypothetical protein BSU20020; homotrimer, beta barrel, unknown function; 2.30A {Bacillus subtilis} (A:) Length = 142 Score = 41.8 bits (98), Expect = 1e-04 Identities = 11/109 (10%), Positives = 34/109 (31%), Gaps = 8/109 (7%) Query: 250 FILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI---GEFRVHYAGFFDPGFGCVLPQEV 306 + +EF + +++P A ++P + G + + G D + + Sbjct: 32 VAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESY----KGDN 87 Query: 307 GAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ 355 + ++ G I + + + + + G+ + Sbjct: 88 D-FWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIEVDRLGNGDRGG 135 Score = 40.3 bits (94), Expect = 4e-04 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 7/103 (6%) Query: 78 VLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPL 137 + + +VPL ++ L G A+ P+SS + + I +Y G Sbjct: 33 AIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNS-----MGVIDESYKGDN 87 Query: 138 YLEILPRTF--PIVVRVGSRLSQIRFVKERKFCSQEELSALHE 178 P ++ G R+ Q R +K+ E+ L Sbjct: 88 DFWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIEVDRLGN 130 >2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A (A:) Length = 147 Score = 40.3 bits (94), Expect = 4e-04 Identities = 17/162 (10%), Positives = 40/162 (24%), Gaps = 29/162 (17%) Query: 198 SVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDPNEF 257 + ++ + ++ R A D+ + + + P E Sbjct: 7 NSPVRFVKETNRAKSPTRQSPGAAGYDLY------------------SAYD-YTIPPGER 47 Query: 258 YIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSS 317 + + + +P + P + G D + + +L Sbjct: 48 QLIKTDISMSMPKFCYGRIAPRSGLSLKGIDIGGGVIDEDYRGNI------GVILINNGK 101 Query: 318 VPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQSQ 355 F + G I +L Y+ + RG Sbjct: 102 CTFNVNTGDRIAQLIYQRIYYPELEEVQSLDSTNRGDQGFGS 143 Score = 38.4 bits (89), Expect = 0.002 Identities = 18/154 (11%), Positives = 43/154 (27%), Gaps = 26/154 (16%) Query: 30 QIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGG--TVLDANCVYIV 87 + +R F+ + S + DL + ++ Sbjct: 2 FNMNINSPVR-----------FVKETNRAKSPTRQSPGAAGYDLYSAYDYTIPPGERQLI 50 Query: 88 PLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-F 146 S+++ P+S + + I +Y G + + ++ Sbjct: 51 KTDISMSMPKFCYGRIAPRSGLSLKGIDIGG--------GVIDEDYRGNIGVILINNGKC 102 Query: 147 PIVVRVGSRLSQIRFVKERKFCSQEELSALHELS 180 V G R++Q+ + + EL + L Sbjct: 103 TFNVNTGDRIAQLIYQR----IYYPELEEVQSLD 132 >3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A* (A:) Length = 141 Score = 35.7 bits (82), Expect = 0.008 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 8/87 (9%) Query: 78 VLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPL 137 V+ A V S+ + +G P+S + + G I +Y+G + Sbjct: 35 VVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAG-------VIDEDYTGEV 87 Query: 138 YLEILP-RTFPIVVRVGSRLSQIRFVK 163 + + +++ G R++Q+ + Sbjct: 88 KVILYNTTERDYIIKKGDRIAQLILEQ 114 Score = 35.7 bits (82), Expect = 0.009 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 11/111 (9%) Query: 250 FILDPNEFYIFASREFIQIPPSLVAEMIP-YDHSIGEFRVHYAGFFDPGFGCVLPQEVGA 308 ++ ++ I++P + P + AG D + + Sbjct: 34 VVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAGVIDEDYTGEV------ 87 Query: 309 KAVLEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQSQ 355 K +L + ++++ G I +L E + + + ARGS Sbjct: 88 KVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLDLSDTARGSGGFGS 138 >1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} (A:) Length = 152 Score = 33.8 bits (77), Expect = 0.038 Identities = 23/168 (13%), Positives = 48/168 (28%), Gaps = 35/168 (20%) Query: 198 SVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDPNEF 257 V + +GK+ + A +A +D+ + L P + Sbjct: 6 DVKILDPRVGKEFPLPTYATSGSAGLDLRA-----------------CLNDAVELAPGDT 48 Query: 258 YIFASREFIQIPPSLVAEMIPYDHSIGEFRVHY-----AGFFDPGF-GCVLPQEVGAKAV 311 + + I I +A M+ S + G D + G + Sbjct: 49 TLVPTGLAIHIADPSLAAMM-LPRSGLGHKHGIVLGNLVGLIDSDYQGQL-------MIS 100 Query: 312 LEVRSSVPFVLEHGQIIGRLKYESMDGEPERLYGE----ARGSHYQSQ 355 + R F ++ G+ I ++ + + L + RG Sbjct: 101 VWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGH 148 >1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase- bromide complex; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} (C:105-185,C:404-466) Length = 144 Score = 32.4 bits (74), Expect = 0.093 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Query: 320 FVLEHGQIIGRLKYESMDGEPERLYGEAR---GSHYQ 353 + EH ++ LK + + ERLY EAR G+ Q Sbjct: 37 LLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQ 73 >2gj1_A Lactoperoxidase, LPO; oxidoreductase, metal-binding protein; HET: NAG MAN HEM; 2.30A {Bos taurus} PDB: 3bxi_A* 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3erh_A* 3faq_A* 2gjm_A* 3fnl_A* 2z5z_A* 2o86_A* ... (A:221-405,A:520-583) Length = 249 Score = 30.8 bits (69), Expect = 0.26 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Query: 320 FVLEHGQIIGRLKYESMDGEPERLYGEAR---GSHYQ 353 + EH ++ LK + E+LY EAR G+ Q Sbjct: 37 LLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQ 73 >1cvu_A Prostaglandin H2 synthase-2; COX-2, cyclooxygenase, prostaglandin, arachidonate, endoperoxide, oxidoreductase; HET: NAG MAN BOG ACD; 2.40A {Mus musculus} (A:158-334,A:514-552) Length = 216 Score = 28.5 bits (63), Expect = 1.4 Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Query: 320 FVLEHGQIIGRLKYESMDGEPERLYGEAR---GSHYQ 353 ++ EH ++ LK E + E+L+ ++ Sbjct: 117 WLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGETI 153 >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxidase, prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} (A:158-406,A:514-553) Length = 289 Score = 28.1 bits (62), Expect = 1.9 Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%) Query: 320 FVLEHGQIIGRLKYESMDGEPERLYGEAR---GSHYQ 353 ++ EH ++ LK E E+L+ AR Sbjct: 117 WLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETI 153 >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} (C:) Length = 373 Score = 27.0 bits (58), Expect = 3.7 Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 90 MESLNLKNGISAYANPKSSIGRIDVFARV 118 M S+++ G ++ K S I V+ RV Sbjct: 3 MASMDISGGNTSRQPQKKSNQNIQVYVRV 31 >1ztm_A Fusion glycoprotein; fusion protein, 6-helix bundle,trimer, post-fusion, viral protein; HET: NAG; 3.05A {Human parainfluenza virus 3} (A:1-24,A:267-424) Length = 182 Score = 27.1 bits (60), Expect = 3.8 Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 11/83 (13%) Query: 111 RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQI-----RFVKER 165 +I R++ + DSIS N + LP ++ G+ L Sbjct: 21 KISQLTRLLNTQIYRVDSISYNIQNREWYIPLPSH---IMTKGAFLGGADVKECIEAFSS 77 Query: 166 KFCSQEELSALHELSPLVQDGLR 188 C + L+ ++ L Sbjct: 78 YICPSDPGFV---LNHEMESCLS 97 >2poc_A D-fructose-6-, isomerase domain of glutamine-fructose-6- phosphate transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans SC5314} PDB: 2put_A* 2puv_A* 2puw_A* (A:1-206) Length = 206 Score = 27.1 bits (59), Expect = 4.0 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 64 KHFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFAR 117 KHF +EI + + I + L G+ ++ + RI + A Sbjct: 6 KHFMQKEIFEQPDSAFNTMRGRIDFENCVVTL-GGLKSWLSTIRRCRRIIMIAC 58 >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transferase, two-component regulatory system; 3.80A {Thermotoga maritima} (A:1-113,A:195-205) Length = 124 Score = 26.6 bits (58), Expect = 4.8 Identities = 8/89 (8%), Positives = 20/89 (22%), Gaps = 4/89 (4%) Query: 245 APEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI----GEFRVHYAGFFDPGFGC 300 L + +++ Q+ ++ E F+ Sbjct: 17 LETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPDFEEIGSVAESVFENKEPV 76 Query: 301 VLPQEVGAKAVLEVRSSVPFVLEHGQIIG 329 L + +R S + + G Sbjct: 77 FLNFYKFGERYFNIRFSPFRNAKTQLLEG 105 >2o5n_A MUHV1GPM153; mouse cytomegalovirus, MHC-I-like, M145 family, MHC- IV, IG-superfamily, alpha-beta protein, viral protein; HET: NAG BMA NDG; 2.40A {Murid herpesvirus 1} (A:15-145) Length = 131 Score = 26.6 bits (58), Expect = 5.4 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 242 SWDAPEGQFILDPNEFYIFASREFIQIPPSLVAE 275 SW PE QF+L EF + +Q P LV E Sbjct: 53 SW--PEIQFLLQNREFVSKYYADVVQTPGELVVE 84 >1fbv_A Signal transduction protein CBL; CBL, ZAP-70, phosphorylation, tyrosine kinase, ubiquitination, protein degradation,, ligase; HET: PTR; 2.90A {Homo sapiens} (A:131-221,A:308-335) Length = 119 Score = 26.7 bits (59), Expect = 5.5 Identities = 10/36 (27%), Positives = 16/36 (44%) Query: 82 NCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFAR 117 I +E++ LK+ I N S+ D+F R Sbjct: 35 EVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTR 70 >3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} (B:155-245) Length = 91 Score = 26.7 bits (59), Expect = 5.5 Identities = 10/36 (27%), Positives = 16/36 (44%) Query: 82 NCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFAR 117 I +E++ LK+ I N S+ D+F R Sbjct: 35 EVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTR 70 >2fjr_A Repressor protein CI; genetic switch, regulation, cooperativity, transcription regulator; 1.95A {Enterobacteria phage 186} PDB: 2fkd_A (A:1-70) Length = 70 Score = 26.5 bits (59), Expect = 6.1 Identities = 4/30 (13%), Positives = 12/30 (40%), Gaps = 2/30 (6%) Query: 152 VGSRLSQIRFVKERKFCSQEELSALHELSP 181 L +I + F + +L+ +++ Sbjct: 7 NVDVLDRIC--EAYGFSQKIQLANHFDIAS 34 >2cme_A ORF-9B, ORF13, hypothetical protein 5; alternative open reading frame, lipid-binding, virus assembly; HET: D10; 2.8A {Human sars coronavirus} (A:) Length = 78 Score = 26.2 bits (57), Expect = 7.3 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Query: 143 PRTFPIVVRVGSRLS------QIRFVKERKFCS 169 P+ +PI++R+GS LS + ++ R F S Sbjct: 20 PKVYPIILRLGSNLSLSMARRNLDSLEARAFQS 52 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.319 0.138 0.404 Gapped Lambda K H 0.267 0.0554 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 2,845,453 Number of extensions: 132805 Number of successful extensions: 341 Number of sequences better than 10.0: 1 Number of HSP's gapped: 317 Number of HSP's successfully gapped: 58 Length of query: 367 Length of database: 4,956,049 Length adjustment: 90 Effective length of query: 277 Effective length of database: 1,913,599 Effective search space: 530066923 Effective search space used: 530066923 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 55 (25.4 bits)