HHsearch results for GI: 254780481 and protein with PDBid: 2j01_7
>2j01_7 50S ribosomal protein L34; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: j.118.1.1 PDB: 1vsp_Z 2hgj_6 2hgq_6 2hgu_6 1vsa_Z 2j03_7 2jl6_7 2jl8_7 2v47_7 2v49_7 2wdi_7 2wdj_7 2wdl_7 2wdn_7 2wh2_7 2wh4_7 2wrj_7 2wrl_7 2wro_7 2wrr_7 ...
Probab=99.91 E-value=1.1e-25 Score=137.46 Aligned_cols=44 Identities=50% Similarity=0.795 Sum_probs=43.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 98876787841012332355415977799999999700265229
Q gi|254780481|r 1 MKRTYNPSNIVRKRRCGFLARMSTRSGIRILNRRRSKGRKRLSA 44 (44)
Q Consensus 1 mKrTyQPs~~kRkr~HGF~~Rm~T~~GRkvL~rRr~KGR~~Lsa 44 (44)
||||||||+++|+++|||++||+|++||+||++|++|||+.|||
T Consensus 1 MKrTyqPs~~kRkr~HGFr~Rm~T~~GRkvl~rRR~KGR~~Ls~ 44 (49)
T 2j01_7 1 MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTP 44 (49)
T ss_dssp CCCSCCCCHHHHHHHHSHHHHHHSHHHHHHHHHHHHHTCSCSSC
T ss_pred CCCCCCCCCCEECHHHCHHHHCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 98776886320100004687706720099999999829958631