HHSEARCH alignment of GI: 254780482 and SCOP domain: d1a6fa_

Alignment
>d1a6fa_ d.14.1.2 (A:) RNase P protein {Bacillus subtilis [TaxId: 1423]}
Probab=99.96  E-value=2.5e-29  Score=179.94  Aligned_cols=107  Identities=31%  Similarity=0.412  Sum_probs=97.8

Q ss_pred             CCCEEECCCHHHHHHHHH-CCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             986132489899999970-9851368579999966876677379999607877512436689999999999754213488
Q gi|254780482|r    1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG   79 (123)
Q Consensus         1 m~~~~rLk~~~dF~~v~k-g~~~~~~~~~i~~~~~~~~~~~~R~G~~vsKKvg~AV~RNriKR~lRe~~R~~~~~~~~~~   79 (123)
                      |++.+||+++.||+.|++ |.++.+++++++++++++ .+++|+||+||||+|+||+||++||+|||+||.+.+.+  ++
T Consensus         3 l~k~~RL~~~~dF~~v~k~g~~~~~~~~~l~~~~~~~-~~~~R~G~~vsKKvg~AV~RNriKR~lRe~~r~~~~~~--~~   79 (113)
T d1a6fa_           3 LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPE-NDELRVGLSVSKKIGNAVMRNRIKRLIRQAFLEEKERL--KE   79 (113)
T ss_dssp             CCGGGBCCSHHHHHHHHHHSEEEECSSEEEEECCCTT-CSSCEEEEEECSTTCCHHHHHHHHHHHHHHHHHHTTTB--CS
T ss_pred             CCCCCCCCCHHHHHHHHHCCCEEECCCEEEEEECCCC-CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC--CC
T ss_conf             9741427998999999986958748978999972898-98836999992222446888999999999999752338--99


Q ss_pred             CEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             3399985720037998999999999999986
Q gi|254780482|r   80 HDYVLIAKRDALFIPFKELCNHFVERVRRNK  110 (123)
Q Consensus        80 ~d~Viiar~~~~~~~~~~l~~~l~~~l~k~~  110 (123)
                      +||||++++++.+.+|++|+++|..+|+++.
T Consensus        80 ~d~Vvi~~~~~~~~~~~~l~~~l~~ll~k~~  110 (113)
T d1a6fa_          80 KDYIIIARKPASQLTYEETKKSLQHLFRKSS  110 (113)
T ss_dssp             SEEEEEECGGGTTCCHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             8699997077675999999999999999816


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: RNase P protein
domain: RNase P protein
species: Bacillus subtilis [TaxId: 1423]