HHSEARCH alignment of GI: 254780482 and SCOP domain: d1d6ta_

Alignment
>d1d6ta_ d.14.1.2 (A:) RNase P protein {Staphylococcus aureus [TaxId: 1280]}
Probab=99.96  E-value=3e-29  Score=179.48  Aligned_cols=108  Identities=24%  Similarity=0.329  Sum_probs=97.9

Q ss_pred             CCCEEECCCHHHHHHHHH-CCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             986132489899999970-9851368579999966876677379999607877512436689999999999754213488
Q gi|254780482|r    1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG   79 (123)
Q Consensus         1 m~~~~rLk~~~dF~~v~k-g~~~~~~~~~i~~~~~~~~~~~~R~G~~vsKKvg~AV~RNriKR~lRe~~R~~~~~~~~~~   79 (123)
                      |.+.+||++++||+.|++ |.++.++++++++.++++. +++|+||+||||+|+||+||++||++||+||.+.+.+  +|
T Consensus         3 l~k~~RL~~~~dF~~v~~~G~~~~~~~~~l~~~~~~~~-~~~R~G~~vsKKvg~AV~RNriKR~lRe~~R~~~~~~--~~   79 (117)
T d1d6ta_           3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEI-DHFRLGISVSKKLGNAVLRNKIKRAIRENFKVHKSHI--LA   79 (117)
T ss_dssp             CCGGGBCCSSHHHHHHHHHCEECCSSSEECEECSTTCC-SSCCEEEECCSSSCSTTHHHHHHHHHHHHHHHGGGTC--CS
T ss_pred             CCHHHHCCCHHHHHHHHHCCCEEECCCEEEEEECCCCC-CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC--CC
T ss_conf             86466658989999999869888689789999738988-8856999993567645798999999999998632137--99


Q ss_pred             CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             33999857200379989999999999999864
Q gi|254780482|r   80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKR  111 (123)
Q Consensus        80 ~d~Viiar~~~~~~~~~~l~~~l~~~l~k~~~  111 (123)
                      +|||+++++++.+.+|++|.++|..+|+++.-
T Consensus        80 ~d~Vvi~~~~~~~~~~~el~~~l~~llkk~~l  111 (117)
T d1d6ta_          80 KDIIVIARQPAKDMTTLQIQNSLEHVLKIAKV  111 (117)
T ss_dssp             SCEEEEECSGGGGCCTTHHHHHHTTHHHHHTC
T ss_pred             CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             53999971664659999999999999999626


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: RNase P protein
domain: RNase P protein
species: Staphylococcus aureus [TaxId: 1280]