HHsearch alignment for GI: 254780483 and conserved domain: KOG1239

Probab=96.94  E-value=0.0018  Score=43.77  Aligned_cols=200  Identities=18%  Similarity=0.147  Sum_probs=124.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             632016399999999999988899999999999888778889999973145115-6789999999850487867889999
Q gi|254780483|r  355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPI  433 (581)
Q Consensus       355 ~~i~NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~~i~ekyk~d~~-~~~~~e~m~ly~~~~vnP~~GClP~  433 (581)
T Consensus        30 s~~~~~~~~~~~~t~~~~~~~~p~~~~~~~s~~v~~~~~~~~~~~~~~~~~~~p~~~lq~~l~~~h~~~g~pww~~i~~~  109 (372)
T KOG1239          30 SSPGFSGFSVFLRTILVKLTNSPLSQPEASSTSVVATVSPIIEGILLALSSWRPVATLQNELERLHVYSGLPWWASIVAT  109 (372)
T ss_pred             CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             66776654401035410146688776766405788761316778887732667424889999999997088613788876


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC------CCCHHHHHHHH-----HCCCCCCH---HHHHHHHHHHHHHH
Q ss_conf             999999999999998769862887534100003------35725666764-----10222202---78999999999999
Q gi|254780483|r  434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA------AADPTNIFTLF-----GILPFYLP---GFMHVGIWPIIMSL  499 (581)
Q Consensus       434 l~q~p~~~a~~~~~~~~ielr~~~f~~Wi~dls------~~d~~~~~~~~-----~~~p~~~~---~~~~~~ilp~l~~~  499 (581)
T Consensus       110 t~~ir~~i~~~~~~~~~~~akls~~~~~mp~~~~~l~~a~~~~~~~~~~q~~~~~l~~~~~v~~~~l~~~v~q~~l~~sf  189 (372)
T KOG1239         110 TVLIRSLITPLLTNSQKNEAKLSKIFPEMPSLGEELGEAAQDNNALLSWQEEQKLLVKKYGVKPKQLALPVVQGPLFISF  189 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHH
T ss_conf             76676545567774015778876237012788988876311331368888999864554388840455654101147889


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999997528877468999999996899999998787999999999999999999999
Q gi|254780483|r  500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI  556 (581)
Q Consensus       500 ~m~~~~k~~p~~~d~~q~~~~~~mp~~~~~~~~~~~~gl~~y~~~~~~~~~~qq~~i  556 (581)
T Consensus       190 f~air~ma~~v~~f~t~--g~~wf~dLt~~dp~~ilp~it~~~~~~~~~~~~~~~~~  244 (372)
T KOG1239         190 FMAIRVMAVPVPSFTTG--GLLWFPDLTGPDPLYILPGITLATLTLFIELGAETGLS  244 (372)
T ss_pred             HHHHHHHHCCCCCCCHH--HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998764266664125--67741146666730366789999999999987776431