HHsearch alignment for GI: 254780483 and conserved domain: PRK01001
>PRK01001 putative inner membrane protein translocase component YidC; Provisional.
Probab=100.00 E-value=0 Score=723.59 Aligned_cols=487 Identities=26% Similarity=0.434 Sum_probs=328.8
Q ss_pred CEEEEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEE-ECCC-----CCC--------------------CCCE-
Q ss_conf 728997664999997699559999953571344788772688-5456-----665--------------------5310-
Q gi|254780483|r 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS-----NTK--------------------NAYF- 121 (581)
Q Consensus 69 ~~I~Iend~l~i~is~~GG~I~~~~LK~Y~~~~~~ds~~v~L-l~~~-----~~~--------------------~~y~- 121 (581)
T Consensus 224 ~~yvL~n~Y~Qiv~S~~~gai~~iNLp~~s~-en~~Siv~ei~fDr~l~~~~p~~a~FP~~~~~~~~~~~~k~~~GGyyP 302 (791)
T PRK01001 224 SYYVLSNEYMQIVVSQESGAIEGINLPFASD-ENNKSIVNEIGFDRDLASESPSEASFPGLSSIDPQRQQIKNSIGGYYP 302 (791)
T ss_pred CEEEEECCCEEEEEECCCCCHHHCCCCCCCC-CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 3799835616899954774110005764466-788760141133644550699635588875436322426534566027
Q ss_pred -EEEECCCCCCCCCCCCCCCCEECCCCCCCC------------CCCCCEEEEECCCCEEEEEEEEECCC--CEEEEEEEE
Q ss_conf -000013478775433343210015666566------------66650477415884269999971688--358999863
Q gi|254780483|r 122 -AELDYVSTANNIELPNSNTVWNLISGKILT------------PTTPIKLVFKNANNILFERTISLDEH--YLFKIVDTV 186 (581)
Q Consensus 122 -~~~G~~~~~~~~~~p~~~~~~~~~~~~~l~------------~~~~v~l~~~~~~g~~i~kt~t~~~~--Y~i~i~~~v 186 (581)
T Consensus 303 LLRR~ll~~~-~~~~p~~~~Aln~vS~~e~~~~~~~~y~V~~f~~~~i~~e--~~~-~~i~ktY~~~e~~PY~f~~~i~i 378 (791)
T PRK01001 303 LLRRGLLSDS-KKRVPAQYHALNIVSGRELASPVALGYRVVSFDNKSLQLE--SND-GSIRKTYSLGEEQPYAFELAIQL 378 (791)
T ss_pred HHHHHHHCCC-CCCCCCHHHHHEECCCCCCCCHHHCEEEEEEECCCEEEEE--CCC-CCEEEEEECCCCCCEEEEEEEEE
T ss_conf 6652123136-5658604442100144446770131479999638548997--289-71788887788887069999753
Q ss_pred CCCCCCCCCC--CCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEE
Q ss_conf 1576664222--42101202568654442001100000156543210013333333222332346357873110589996
Q gi|254780483|r 187 TNNSIDQIRF--SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 (581)
Q Consensus 187 ~N~s~~~i~~--~~~~~i~r~~~~~~~~~~~~~~g~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~Wva~~qkYF~salI 264 (581)
T Consensus 379 ~~~~~~lwitsGvPEvEi~S~~~~Pa------~ky~~~k~~k~~~~~v~lpk~~~~~~~~~~~~p~wi~nsng~~g~il~ 452 (791)
T PRK01001 379 TQGSEDLWITSGVPEVEIMSNAFAPA------IKYRVIKKNKSDLDKVKLPKAKDPLAVRNGVYPQWILNSNGYFGIILT 452 (791)
T ss_pred CCCCCCEEEECCCCEEEEECCCCCCC------HHHHEECCCCCCEEEECCCCCCCCEEECCCCCCEEEECCCCEEEEECC
T ss_conf 36666515765997279724898610------321000246662024238887664011168874058727964678615
Q ss_pred ECCCCCEEEEEEE------------CCCCCCCEEEEEECC--CCCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCCCCH-
Q ss_conf 0789841589983------------167664102222024--4445788603678998850002788763220146310-
Q gi|254780483|r 265 PSKETSFHSQFKY------------LSDGHARYQAKFSAN--EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR- 329 (581)
Q Consensus 265 P~~~~~~~~~~~~------------~~~~~~~y~~~~~~~--~~~i~pg~~~~~~~~lY~GPk~~~~L~~~~~~l~~~~- 329 (581)
T Consensus 453 plt~i~~g~~~~~i~g~~vp~rl~~~~~k~~~~~a~~~pgy~~~lpl~~~~g~~~f~~~agp~~~~~lk~~d~~~~n~~g 532 (791)
T PRK01001 453 PLTEIPAGYASSYISGSTVPTRLSQLSPKNQAYPASKYPGYEALLPLPKEAGTYRFLVYAGPLADPTLKTLDRAYTNSKG 532 (791)
T ss_pred CCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 57668976211014688666134430842245642248983474015666875899997167675588888776338788
Q ss_pred ----HHHHHHH-CCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----1233320-110356899----9999998876320163999999999999888999999999998887788899999
Q gi|254780483|r 330 ----FEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 (581)
Q Consensus 330 ----l~~~vd~-Gwf~~i~kp----lf~~L~~l~~~i~NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~~i~ 400 (581)
T Consensus 533 ~~p~y~~~~~~~g~f~fit~pfa~~lf~~m~FF~~lTGSwGLAIILLTIiIRLLLfPLt~KQ~KSMkKMQeLQPeMkEIQ 612 (791)
T PRK01001 533 ENPEYLDCITFRGFFAFITEPFAALLFIIMKFFKFLTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQ 612 (791)
T ss_pred CCCCHHEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 89640012352115446457778999999999975447188999999999999998405899999999988688999999
Q ss_pred HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHHHC
Q ss_conf 73145115678999999985048786788999999999999999999876986288753-41000033572566676410
Q gi|254780483|r 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGI 479 (581)
Q Consensus 401 ekyk~d~~~~~~~e~m~ly~~~~vnP~~GClP~l~q~p~~~a~~~~~~~~ielr~~~f~-~Wi~dls~~d~~~~~~~~~~ 479 (581)
T Consensus 613 EKYKdDp-QKlQqEMMKLYKE~GVNPLgGCLPLLIQMPIFIALY~VL~~sieLRgAsFL~gWI~DLSaPD~lF--~~~~P 689 (791)
T PRK01001 613 QKYKKEP-KRAQMEIMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLF--SWETP 689 (791)
T ss_pred HHCCCCH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC--CCCCC
T ss_conf 8807999-99999999999870999156678999999999999999998887518930565776455777455--56776
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2222027899999999999999999752887------74689999-9999689999999878799999999999999999
Q gi|254780483|r 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------PADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 (581)
Q Consensus 480 ~p~~~~~~~~~~ilp~l~~~~m~~~~k~~p~------~~d~~q~~-~~~~mp~~~~~~~~~~~~gl~~y~~~~~~~~~~q 552 (581)
T Consensus 690 i~flG---~p~~ILPILmgvtMFLQQKmS~~k~~gP~t~qq~QQKmMm~mMPLmF~fif~nFPSGLvLYWvtSNLLsIvQ 766 (791)
T PRK01001 690 IWFIG---NEFHLLPILLGIVMFLQQKISALKKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQ 766 (791)
T ss_pred CCCCC---CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf 31135---507799999999999999735888899999449999999999999999999711026869999989999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHH
Q ss_conf 999987479983479898888
Q gi|254780483|r 553 QAVIMKMHGAEIGLIDRLRST 573 (581)
Q Consensus 553 q~~i~~~~~~~~~~~~~~~~~ 573 (581)
T Consensus 767 Q~iINKiL-d~K~lk~Ev~~~ 786 (791)
T PRK01001 767 QWVTNKIL-DSKHLKNEVVIN 786 (791)
T ss_pred HHHHHHHH-HHHHHHHHHHHH
T ss_conf 99999973-388888897730